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BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00695;MIR398;CU223654.1/49-129 80863:Populus tremula x Populus
          alba
          Length = 81

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                     
Query: 1  aggattcctacaggagcgacctgaaatcacatgtgggctgcac 43
          |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aggattcctacaggagcgacctgaaatcacatgtgggctgcac 43

>RF00695;MIR398;CU225561.1/49-129 80863:Populus tremula x Populus
          alba
          Length = 81

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                   
Query: 1  aggattcctacaggagcgacctgaaatcacatgtgggctgc 41
          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aggattcctacaggagcgacctgaaatcacatgtgggctgc 41



 Score = 60.0 bits (30), Expect = 6e-09
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 62 gcaacatgtgttctcaggtcgcccctgccgggct 95
          ||||||| ||||||||||||||||||||||||||
Sbjct: 45 gcaacatttgttctcaggtcgcccctgccgggct 78

>RF00695;MIR398;AASG02014986.1/899-1036 3988:Ricinus communis
           (castor bean)
          Length = 138

 Score = 63.9 bits (32), Expect = 4e-10
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 66  catgtgttctcaggtcgcccctgccgggcttt 97
           ||||||||||||||||||||||||||||||||
Sbjct: 106 catgtgttctcaggtcgcccctgccgggcttt 137



 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 36/37 (97%), Gaps = 1/37 (2%)
 Strand = Plus / Plus

                                               
Query: 1  aggattcctacaggagcgacctga-aatcacatgtgg 36
          |||||||||||||||||||||||| ||||||||||||
Sbjct: 1  aggattcctacaggagcgacctgagaatcacatgtgg 37

>RF00695;MIR398;AARH01000462.1/173558-173473 3694:Populus
          trichocarpa
          Length = 86

 Score = 61.9 bits (31), Expect = 1e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 66 catgtgttctcaggtcgcccctgccgggctt 96
          |||||||||||||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccctgccgggctt 84

>RF00695;MIR398;AP005783.3/58390-58303 39947:Oryza sativa Japonica
          Group
          Length = 88

 Score = 52.0 bits (26), Expect = 1e-06
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 68 tgtgttctcaggtcgcccctgccggg 93
          ||||||||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctgccggg 83

>RF00695;MIR398;AC146941.8/124295-124199 3880:Medicago truncatula
          (barrel medic)
          Length = 97

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 66 catgtgttctcaggtcgcccctgc 89
          ||||||||||||||||||||||||
Sbjct: 65 catgtgttctcaggtcgcccctgc 88

>RF00695;MIR398;AM426431.2/9842-9931 29760:Vitis vinifera
          Length = 90

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 66 catgtgttctcaggtcgcccctgc 89
          ||||||||||||||||||||||||
Sbjct: 58 catgtgttctcaggtcgcccctgc 81

>RF00695;MIR398;ABIM01009168.1/9183-9310 3649:Carica papaya (papaya)
          Length = 128

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 68  tgtgttctcaggtcgcccctgc 89
           ||||||||||||||||||||||
Sbjct: 98  tgtgttctcaggtcgcccctgc 119