miRNEST 2.0, an integrative microRNA resource :: BLAST
>51794_ptc-miR478q:pmrd
Length = 95
Score = 180 bits (91), Expect = 1e-46
Identities = 94/95 (98%)
Strand = Plus / Plus
Query: 1 tctcatttttagggataaacgttaatgttttagacgagtctcctaaattttagggactaa 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctcctttttagggataaacgttaatgttttagacgagtctcctaaattttagggactaa 60
Query: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
>51797_ptc-miR478u:pmrd
Length = 95
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 1 tctcatttttagggataaacgttaatgttttagacgagtctcctaaattttagggactaa 60
|||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |
Sbjct: 1 tctcctttttagggataaacgttaatattttagacgagtctcctaatttttagggactga 60
Query: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
>51792_ptc-miR478o:pmrd
Length = 95
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 1 tctcatttttagggataaacgttaatgttttagacgagtctcctaaattttagggactaa 60
|||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct: 1 tctcctttttaggaataaacgttaatattttagacgagtctcctaaattttagggactga 60
Query: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
>51793_ptc-miR478p:pmrd
Length = 95
Score = 149 bits (75), Expect = 4e-37
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 1 tctcatttttagggataaacgttaatgttttagacgagtctcctaaattttagggactaa 60
|||| ||||| |||| |||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 1 tctccttttttgggacaaacgttaatattttagacgagtctcctaatttttagggactaa 60
Query: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
>51785_ptc-miR478h:pmrd
Length = 95
Score = 133 bits (67), Expect = 2e-32
Identities = 88/95 (92%)
Strand = Plus / Plus
Query: 1 tctcatttttagggataaacgttaatgttttagacgagtctcctaaattttagggactaa 60
|||| |||||||||| |||||| ||| ||||||||||||||||||| |||||||||||
Sbjct: 1 tctcctttttagggacaaacgtcaatattttagacgagtctcctaatttttagggactgg 60
Query: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
>51791_ptc-miR478n:pmrd
Length = 59
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 37 agtctcctaaattttagggactaatgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51790_ptc-miR478m:pmrd
Length = 59
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 37 agtctcctaaattttagggactaatgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51789_ptc-miR478l:pmrd
Length = 59
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 37 agtctcctaaattttagggactaatgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51788_ptc-miR478k:pmrd
Length = 59
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 37 agtctcctaaattttagggactaatgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51787_ptc-miR478j:pmrd
Length = 59
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 37 agtctcctaaattttagggactaatgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51786_ptc-miR478i:pmrd
Length = 59
Score = 93.7 bits (47), Expect = 2e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 37 agtctcctaaattttagggactaatgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51795_ptc-miR478r:pmrd
Length = 58
Score = 71.9 bits (36), Expect = 8e-14
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 52 agggactaatgtcatttttaacgtgtctcctatttttagggacc 95
||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 15 agggactgatatcatttttaacgtgtctcctatttttagggacc 58
>51780_ptc-miR478b:pmrd
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 61/69 (88%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 28 ttttagacgagtctcctaaattttagggactaatgtcattttta-acgtgtctcctattt 86
|||||||||||||||||| ||||||||||| ||| |||||| |||||||| ||||||
Sbjct: 29 ttttagacgagtctcctat-ttttagggactggtgttattttttgacgtgtcttctattt 87
Query: 87 ttagggacc 95
|||||||||
Sbjct: 88 ttagggacc 96
>51781_ptc-miR478c:pmrd
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 80/96 (83%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 1 tctcatttttagggataaacgttaatgttttagacgagtctcctaaattttagggactaa 60
|||| ||||||||| |||| || ||| |||||||||||| | || | |||||||| ||
Sbjct: 1 tctcctttttagggttaaatgtcaatattttagacgagttttct-atttttagggtctgg 59
Query: 61 tgtca-tttttaacgtgtctcctatttttagggacc 95
||| | ||||| |||||||| |||||||||||||||
Sbjct: 60 tgttattttttgacgtgtcttctatttttagggacc 95
>51779_ptc-miR478a:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 59/68 (86%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 28 ttttagacgagtctcctaaattttagggactaatgtcattttta-acgtgtctcctattt 86
||||||||||||||| || ||||||||||| ||| |||||| |||||||| ||||||
Sbjct: 28 ttttagacgagtctcttat-ttttagggactggtgttattttttgacgtgtcttctattt 86
Query: 87 ttagggac 94
||||||||
Sbjct: 87 ttagggac 94
