miRNEST 2.0, an integrative microRNA resource :: BLAST
>51792_ptc-miR478o:pmrd
Length = 95
Score = 172 bits (87), Expect = 3e-44
Identities = 93/95 (97%)
Strand = Plus / Plus
Query: 1 tctcctttttagggataaacgttaatattttagacgagtctcctaatttttagggactga 60
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 tctcctttttaggaataaacgttaatattttagacgagtctcctaaattttagggactga 60
Query: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
>51794_ptc-miR478q:pmrd
Length = 95
Score = 165 bits (83), Expect = 7e-42
Identities = 92/95 (96%)
Strand = Plus / Plus
Query: 1 tctcctttttagggataaacgttaatattttagacgagtctcctaatttttagggactga 60
|||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |
Sbjct: 1 tctcctttttagggataaacgttaatgttttagacgagtctcctaaattttagggactaa 60
Query: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
>51793_ptc-miR478p:pmrd
Length = 95
Score = 165 bits (83), Expect = 7e-42
Identities = 92/95 (96%)
Strand = Plus / Plus
Query: 1 tctcctttttagggataaacgttaatattttagacgagtctcctaatttttagggactga 60
|||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 tctccttttttgggacaaacgttaatattttagacgagtctcctaatttttagggactaa 60
Query: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
>51785_ptc-miR478h:pmrd
Length = 95
Score = 165 bits (83), Expect = 7e-42
Identities = 92/95 (96%)
Strand = Plus / Plus
Query: 1 tctcctttttagggataaacgttaatattttagacgagtctcctaatttttagggactga 60
||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctcctttttagggacaaacgtcaatattttagacgagtctcctaatttttagggactgg 60
Query: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
>51796_ptc-miR478s:pmrd
Length = 95
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 1 tctcctttttagggataaacgttaatattttagacgagtctcctaatttttagggactga 60
|||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |
Sbjct: 1 tctcatttttagggataaacgttaatgttttagacgagtctcctaaattttagggactaa 60
Query: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcatttttaacgtgtctcctatttttagggacc 95
>51791_ptc-miR478n:pmrd
Length = 59
Score = 109 bits (55), Expect = 4e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 37 agtctcctaatttttagggactgatgtcatttttaacgtgtctcctatttttagggacc 95
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51790_ptc-miR478m:pmrd
Length = 59
Score = 109 bits (55), Expect = 4e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 37 agtctcctaatttttagggactgatgtcatttttaacgtgtctcctatttttagggacc 95
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51789_ptc-miR478l:pmrd
Length = 59
Score = 109 bits (55), Expect = 4e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 37 agtctcctaatttttagggactgatgtcatttttaacgtgtctcctatttttagggacc 95
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51788_ptc-miR478k:pmrd
Length = 59
Score = 109 bits (55), Expect = 4e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 37 agtctcctaatttttagggactgatgtcatttttaacgtgtctcctatttttagggacc 95
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51787_ptc-miR478j:pmrd
Length = 59
Score = 109 bits (55), Expect = 4e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 37 agtctcctaatttttagggactgatgtcatttttaacgtgtctcctatttttagggacc 95
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51786_ptc-miR478i:pmrd
Length = 59
Score = 109 bits (55), Expect = 4e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 37 agtctcctaatttttagggactgatgtcatttttaacgtgtctcctatttttagggacc 95
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 agtctcctaatttttagggactgatgttatttttaacgtgtctcctatttttagggacc 59
>51780_ptc-miR478b:pmrd
Length = 96
Score = 81.8 bits (41), Expect = 8e-17
Identities = 86/97 (88%), Gaps = 3/97 (3%)
Strand = Plus / Plus
Query: 1 tctcctttttagggataaa-cgttaatattttagacgagtctcctaatttttagggactg 59
||||| |||||||| |||| ||| || |||||||||||||||||| ||||||||||||||
Sbjct: 1 tctcccttttagggttaaaacgtcaacattttagacgagtctcct-atttttagggactg 59
Query: 60 atgtca-tttttaacgtgtctcctatttttagggacc 95
||| | ||||| |||||||| |||||||||||||||
Sbjct: 60 gtgttattttttgacgtgtcttctatttttagggacc 96
>51795_ptc-miR478r:pmrd
Length = 58
Score = 79.8 bits (40), Expect = 3e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 52 agggactgatgtcatttttaacgtgtctcctatttttagggacc 95
|||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 15 agggactgatatcatttttaacgtgtctcctatttttagggacc 58
>51781_ptc-miR478c:pmrd
Length = 95
Score = 79.8 bits (40), Expect = 3e-16
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 1 tctcctttttagggataaacgttaatattttagacgagtctcctaatttttagggactga 60
|||||||||||||| |||| || |||||||||||||||| | || |||||||||| |||
Sbjct: 1 tctcctttttagggttaaatgtcaatattttagacgagttttct-atttttagggtctgg 59
Query: 61 tgtca-tttttaacgtgtctcctatttttagggacc 95
||| | ||||| |||||||| |||||||||||||||
Sbjct: 60 tgttattttttgacgtgtcttctatttttagggacc 95
>51779_ptc-miR478a:pmrd
Length = 96
Score = 69.9 bits (35), Expect = 3e-13
Identities = 70/79 (88%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 17 aaacgttaatattttagacgagtctcctaatttttagggactgatgtcattttta-acgt 75
|||||| || |||||||||||||||| || ||||||||||||| ||| |||||| ||||
Sbjct: 17 aaacgtcaacattttagacgagtctctta-tttttagggactggtgttattttttgacgt 75
Query: 76 gtctcctatttttagggac 94
|||| ||||||||||||||
Sbjct: 76 gtcttctatttttagggac 94
