miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00897;mir-675;AAKN02038607.1/34464-34536 10141:Cavia porcellus
(domestic guinea pig)
Length = 73
Score = 81.8 bits (41), Expect = 1e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 11 ctggtgcggaaagggcccacagtggacttggt-acactgtgtgccctaaccgctcagtcc 69
|||| ||||| ||||||||||||||||||||| ||||||| |||||||||||||||| ||
Sbjct: 9 ctggcgcggagagggcccacagtggacttggtgacactgtatgccctaaccgctcagccc 68
Query: 70 ctggg 74
|||||
Sbjct: 69 ctggg 73
>RF00897;mir-675;AF214115.1/794-866 230844:Peromyscus maniculatus
bairdii (prairie deer mouse)
Length = 73
Score = 73.8 bits (37), Expect = 3e-13
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 3 cccagggactggtgcggaaagggcccacagtggac-ttggtacactgtgtgccctaaccg 61
|||| ||||||| |||||||||||||||||||||| | || |||||| |||||||||||
Sbjct: 1 cccaaggactggcgcggaaagggcccacagtggacgcttgtgcactgtatgccctaaccg 60
Query: 62 ctcagtccctggg 74
||||| |||||||
Sbjct: 61 ctcagcccctggg 73
