miRNEST 2.0, an integrative microRNA resource :: BLAST
>53116_ptc-miRf11294-akr:pmrd
Length = 101
Score = 200 bits (101), Expect = 1e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 4 actttttctgaactctctccctcaactgctattctagagcttgttaatccttgtcaagtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actttttctgaactctctccctcaactgctattctagagcttgttaatccttgtcaagtg 60
Query: 64 tttccctgtagcagtcgaggcgagggggtttcggaaaatgt 104
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttccctgtagcagtcgaggcgagggggtttcggaaaatgt 101
>53114_ptc-miRf11292-akr:pmrd
Length = 113
Score = 101 bits (51), Expect = 1e-22
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 1 ccaactttttctgaactctctccctcaactgctattctagagcttgttaatccttgtcaa 60
||||||| |||||||||||||||||||||||||| |||||| |||| ||||| ||||||
Sbjct: 109 ccaacttcttctgaactctctccctcaactgctactctagatcttgccaatccctgtcaa 50
Query: 61 gtgtttccctgtagcagtcgagg 83
||||||| ||||||||||||||
Sbjct: 49 gtgtttctgtgtagcagtcgagg 27
>51816_ptc-miR1446d:pmrd
Length = 105
Score = 101 bits (51), Expect = 1e-22
Identities = 75/83 (90%)
Strand = Plus / Plus
Query: 1 ccaactttttctgaactctctccctcaactgctattctagagcttgttaatccttgtcaa 60
||||||| |||||||||||||||||||||||||| |||||| |||| ||||| ||||||
Sbjct: 1 ccaacttcttctgaactctctccctcaactgctactctagatcttgccaatccctgtcaa 60
Query: 61 gtgtttccctgtagcagtcgagg 83
||||||| ||||||||||||||
Sbjct: 61 gtgtttctgtgtagcagtcgagg 83
>51815_ptc-miR1446c:pmrd
Length = 105
Score = 89.7 bits (45), Expect = 4e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 1 ccaactttttctgaactctctccctcaactgctattctagagctt 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccaactttttctgaactctctccctcaactgctattctagagctt 45
>53904_ptc-miRf12082-akr:pmrd
Length = 105
Score = 83.8 bits (42), Expect = 2e-17
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 1 ccaactttttctgaactctctccctcaactgctattctagagcttgttaatccttgtcaa 60
||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| |
Sbjct: 1 ccaacttcttctgaactctctccctcaaccgctactctagagcttggcaatccttgtcga 60
Query: 61 gtgtttccctgtagcagtcgaggcgagggg 90
|||||| |||||| || |||| ||||||
Sbjct: 61 ttgtttctgtgtagcggttgaggtgagggg 90
>51813_ptc-miR1446a:pmrd
Length = 105
Score = 83.8 bits (42), Expect = 2e-17
Identities = 78/90 (86%)
Strand = Plus / Plus
Query: 1 ccaactttttctgaactctctccctcaactgctattctagagcttgttaatccttgtcaa 60
||||||| ||||||||||||||||||||| |||| ||||||||||| |||||||||| |
Sbjct: 1 ccaacttcttctgaactctctccctcaaccgctactctagagcttggcaatccttgtcga 60
Query: 61 gtgtttccctgtagcagtcgaggcgagggg 90
|||||| |||||| || |||| ||||||
Sbjct: 61 ttgtttctgtgtagcggttgaggtgagggg 90
>53903_ptc-miRf12081-akr:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 9 ttctgaactctctccctcaactgctattctagagcttgttaatccttgtcaagtgtttcc 68
||||||||||||||||||||| || | ||||||| ||| | ||||||||| ||||||
Sbjct: 9 ttctgaactctctccctcaaccgccactctagaggttggca--ccttgtcaattgtttct 66
Query: 69 ctgtagcagtcgaggcgagggg 90
|||||| ||||||| ||||||
Sbjct: 67 gtgtagcggtcgaggtgagggg 88
>51814_ptc-miR1446b:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 9 ttctgaactctctccctcaactgctattctagagcttgttaatccttgtcaagtgtttcc 68
||||||||||||||||||||| || | ||||||| ||| | ||||||||| ||||||
Sbjct: 9 ttctgaactctctccctcaaccgccactctagaggttggca--ccttgtcaattgtttct 66
Query: 69 ctgtagcagtcgaggcgagggg 90
|||||| ||||||| ||||||
Sbjct: 67 gtgtagcggtcgaggtgagggg 88
