miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53156_ptc-miRf11334-akr:pmrd
Length = 87
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 40 gtaattattacagacagtaaaggtctgtcggtatataccgaca 82
||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 39 gtaattattaccgacagcaaaggtctgtcggtatagaccgaca 81
>52475_ptc-miRf10653-akr:pmrd
Length = 87
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 40 gtaattattacagacagtaaaggtctgtcggtatataccgaca 82
||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 49 gtaattattaccgacagcaaaggtctgtcggtatagaccgaca 7
>52474_ptc-miRf10652-akr:pmrd
Length = 103
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 40 gtaattattacagacagtaaaggtctgtcggtatataccgaca 82
||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 57 gtaattattaccgacagcaaaggtctgtcggtatagaccgaca 15
>52473_ptc-miRf10651-akr:pmrd
Length = 109
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 40 gtaattattacagacagtaaaggtctgtcggtatataccgaca 82
||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 60 gtaattattaccgacagcaaaggtctgtcggtatagaccgaca 18
>53202_ptc-miRf11380-akr:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 63 tctgtcggtatataccgacataatta 88
|||||||||||||||||| |||||||
Sbjct: 46 tctgtcggtatataccgatataatta 71
>52588_ptc-miRf10766-akr:pmrd
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 62 gtctgtcggtatataccgacataatt 87
||||||||||||||||||||| ||||
Sbjct: 78 gtctgtcggtatataccgacagaatt 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 63 tctgtcggtatataccgaca 82
||||||||||||||||||||
Sbjct: 100 tctgtcggtatataccgaca 81
>52486_ptc-miRf10664-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 tctgtcggtatatactgacg 24
||||||||||||||||||||
Sbjct: 66 tctgtcggtatatactgacg 85
