miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>32380_mmu-mir-1186:mirbase
          Length = 122

 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 116 gtggtgatgcacgcctttaattccaacactcgggaggcagaggcagg 162
           |||||| |||| ||||||||||||| |||||||||||||||| ||||
Sbjct: 51  gtggtggtgcatgcctttaattccagcactcgggaggcagagacagg 5




>32574_mmu-mir-3470b:mirbase
          Length = 126

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 52/59 (88%), Gaps = 1/59 (1%)
 Strand = Plus / Minus

                                                                      
Query: 128 gcctttaattccaacactcgggaggcagaggcaggcggatctcttgagttcaaggccag 186
           ||||||| | ||| ||||||||||||||||||||| | || | ||||||||||||||||
Sbjct: 108 gcctttagtcccagcactcgggaggcagaggcaggtgaat-ttttgagttcaaggccag 51




>32440_mmu-mir-1935:mirbase
          Length = 60

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 40/44 (90%), Gaps = 1/44 (2%)
 Strand = Plus / Plus

                                                       
Query: 143 actcgggaggcagaggcaggcggatctcttgagttcaaggccag 186
           |||| |||||||||||| |||||||||| ||||||| |||||||
Sbjct: 1   actctggaggcagaggctggcggatctc-tgagttcgaggccag 43




>32573_mmu-mir-3470a:mirbase
          Length = 77

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 142 cactcgggaggcagaggcaggcggatctct 171
           ||||| |||||||||||||||| |||||||
Sbjct: 70  cactcaggaggcagaggcaggctgatctct 41




>32329_mmu-mir-709:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 29 cctgcctctgcctccccaatgctgc 53
          |||||||||||||||||| ||||||
Sbjct: 83 cctgcctctgcctccccagtgctgc 59




>32391_mmu-mir-1196:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 13 aactcacagggatctacctgcctctgcct 41
          |||||||||  ||||||||||||||||||
Sbjct: 12 aactcacagaaatctacctgcctctgcct 40