miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>32024_mmu-mir-344g:mirbase
          Length = 71

 Score =  123 bits (62), Expect = 1e-29
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtcaggctcctggcaggagtcctgctctcagctggttccaggctctagccaggggcttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5  agtcaggctcctggcaggagtcctgctctcagctggttccaggctctagccaggggcttg 64

            
Query: 61 ac 62
          ||
Sbjct: 65 ac 66





>32025_mmu-mir-344g:mirbase
          Length = 71

 Score =  123 bits (62), Expect = 1e-29
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtcaggctcctggcaggagtcctgctctcagctggttccaggctctagccaggggcttg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5  agtcaggctcctggcaggagtcctgctctcagctggttccaggctctagccaggggcttg 64

            
Query: 61 ac 62
          ||
Sbjct: 65 ac 66





>32022_mmu-mir-344f:mirbase
          Length = 68

 Score = 75.8 bits (38), Expect = 3e-15
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                
Query: 1  agtcaggctcctggcaggagtcctgctctcagctggttccaggctctagccagg 54
          |||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||
Sbjct: 3  agtcagtctcctggctggagtccagctctaagctggttccaggctctagccagg 56





>32023_mmu-mir-344f:mirbase
          Length = 68

 Score = 75.8 bits (38), Expect = 3e-15
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                
Query: 1  agtcaggctcctggcaggagtcctgctctcagctggttccaggctctagccagg 54
          |||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||
Sbjct: 3  agtcagtctcctggctggagtccagctctaagctggttccaggctctagccagg 56