miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52065_ptc-miRf10243-akr:pmrd
Length = 191
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 50 ccaagtccaagcgcattgggtctggcatgagtgccaga 87
||||||||||||| |||| || ||||||| ||||||||
Sbjct: 28 ccaagtccaagcgtattgagtttggcatgcgtgccaga 65
>51992_ptc-miRf10170-akr:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 ccaagtccaagcgcattgggtctggcatga 79
|||||||||||| ||||||||||||||||
Sbjct: 87 ccaagtccaagcatattgggtctggcatga 116
>53886_ptc-miRf12064-akr:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 51 caagtccaagcgcattgggtctggcatgagtgccaga 87
||||||||||||||| | | |||||||| ||||||||
Sbjct: 51 caagtccaagcgcatggagcctggcatgcgtgccaga 15
>52994_ptc-miRf11172-akr:pmrd
Length = 130
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 50 ccaagtccaagcgcattgggtctggcatg 78
||||||||||| |||||||||||| ||||
Sbjct: 111 ccaagtccaagtgcattgggtctgacatg 83
>52961_ptc-miRf11139-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 50 ccaagtccaagcgcattgggtctggcatgagtgcca 85
||||||||||| | |||||||||||||| ||||||
Sbjct: 57 ccaagtccaagtgtcttgggtctggcatgcgtgcca 92
