miRNEST 2.0, an integrative microRNA resource :: BLAST
>32745_rno-mir-140:mirbase
Length = 99
Score = 153 bits (77), Expect = 3e-38
Identities = 97/101 (96%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 gtgtctctctcttgtgttcctgccggtggttttaccctatggtaggttacgtcatgctgt 60
|||||||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 1 gtgtctctctct-gtgt-cctgccagtggttttaccctatggtaggttacatcatgctgt 58
Query: 61 tctaccacagggtagaaccacggacaggatactggagcacc 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tctaccacagggtagaaccacggacaggatactggagcacc 99
>27743_mml-mir-140:mirbase
Length = 100
Score = 145 bits (73), Expect = 7e-36
Identities = 96/101 (95%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 gtgtctctctcttgtgttcctgccggtggttttaccctatggtaggttacgtcatgctgt 60
|||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgtctctctct-gtgt-cctgccagtggttttaccctatggtaggttacgtcatgctgt 59
Query: 61 tctaccacagggtagaaccacggacaggatactggagcacc 101
|||||||||||||||||||||||||||||||| || |||||
Sbjct: 60 tctaccacagggtagaaccacggacaggataccggggcacc 100
>27744_mml-mir-140:mirbase
Length = 100
Score = 145 bits (73), Expect = 7e-36
Identities = 96/101 (95%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 gtgtctctctcttgtgttcctgccggtggttttaccctatggtaggttacgtcatgctgt 60
|||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgtctctctct-gtgt-cctgccagtggttttaccctatggtaggttacgtcatgctgt 59
Query: 61 tctaccacagggtagaaccacggacaggatactggagcacc 101
|||||||||||||||||||||||||||||||| || |||||
Sbjct: 60 tctaccacagggtagaaccacggacaggataccggggcacc 100
>28458_hsa-mir-140:mirbase
Length = 100
Score = 145 bits (73), Expect = 7e-36
Identities = 96/101 (95%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 gtgtctctctcttgtgttcctgccggtggttttaccctatggtaggttacgtcatgctgt 60
|||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgtctctctct-gtgt-cctgccagtggttttaccctatggtaggttacgtcatgctgt 59
Query: 61 tctaccacagggtagaaccacggacaggatactggagcacc 101
|||||||||||||||||||||||||||||||| || |||||
Sbjct: 60 tctaccacagggtagaaccacggacaggataccggggcacc 100
>28459_hsa-mir-140:mirbase
Length = 100
Score = 145 bits (73), Expect = 7e-36
Identities = 96/101 (95%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 gtgtctctctcttgtgttcctgccggtggttttaccctatggtaggttacgtcatgctgt 60
|||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgtctctctct-gtgt-cctgccagtggttttaccctatggtaggttacgtcatgctgt 59
Query: 61 tctaccacagggtagaaccacggacaggatactggagcacc 101
|||||||||||||||||||||||||||||||| || |||||
Sbjct: 60 tctaccacagggtagaaccacggacaggataccggggcacc 100
>30231_ptr-mir-140:mirbase
Length = 100
Score = 145 bits (73), Expect = 7e-36
Identities = 96/101 (95%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 gtgtctctctcttgtgttcctgccggtggttttaccctatggtaggttacgtcatgctgt 60
|||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgtctctctct-gtgt-cctgccagtggttttaccctatggtaggttacgtcatgctgt 59
Query: 61 tctaccacagggtagaaccacggacaggatactggagcacc 101
|||||||||||||||||||||||||||||||| || |||||
Sbjct: 60 tctaccacagggtagaaccacggacaggataccggggcacc 100
>30842_ppy-mir-140:mirbase
Length = 100
Score = 145 bits (73), Expect = 7e-36
Identities = 96/101 (95%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 gtgtctctctcttgtgttcctgccggtggttttaccctatggtaggttacgtcatgctgt 60
|||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgtctctctct-gtgt-cctgccagtggttttaccctatggtaggttacgtcatgctgt 59
Query: 61 tctaccacagggtagaaccacggacaggatactggagcacc 101
|||||||||||||||||||||||||||||||| || |||||
Sbjct: 60 tctaccacagggtagaaccacggacaggataccggggcacc 100
>30843_ppy-mir-140:mirbase
Length = 100
Score = 145 bits (73), Expect = 7e-36
Identities = 96/101 (95%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 gtgtctctctcttgtgttcctgccggtggttttaccctatggtaggttacgtcatgctgt 60
|||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2 gtgtctctctct-gtgt-cctgccagtggttttaccctatggtaggttacgtcatgctgt 59
Query: 61 tctaccacagggtagaaccacggacaggatactggagcacc 101
|||||||||||||||||||||||||||||||| || |||||
Sbjct: 60 tctaccacagggtagaaccacggacaggataccggggcacc 100
>31498_oan-mir-140:mirbase
Length = 123
Score = 143 bits (72), Expect = 3e-35
Identities = 89/92 (96%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 1 gtgtctctctcttgtgttcctgccggtggttttaccctatggtaggttacgtcatgctgt 60
|||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 14 gtgtctctctct-gtgt-cctgccagtggttttaccctatggtaggttacgtcatgctgt 71
Query: 61 tctaccacagggtagaaccacggacaggatac 92
||||||||||||||||||||||||||||||||
Sbjct: 72 tctaccacagggtagaaccacggacaggatac 103
>33226_bta-mir-140:mirbase
Length = 94
Score = 143 bits (72), Expect = 3e-35
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 18 tcctgccggtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaa 77
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tcctgccagtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaa 70
Query: 78 ccacggacaggatactggagcacc 101
||||||||||||||| || |||||
Sbjct: 71 ccacggacaggataccggggcacc 94
>28214_mne-mir-140:mirbase
Length = 100
Score = 137 bits (69), Expect = 2e-33
Identities = 95/101 (94%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 gtgtctctctcttgtgttcctgccggtggttttaccctatggtaggttacgtcatgctgt 60
|||||||||||| |||| |||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 2 gtgtctctctct-gtgt-cctgccagtggttctaccctatggtaggttacgtcatgctgt 59
Query: 61 tctaccacagggtagaaccacggacaggatactggagcacc 101
|||||||||||||||||||||||||||||||| || |||||
Sbjct: 60 tctaccacagggtagaaccacggacaggataccggggcacc 100
>27388_mdo-mir-140:mirbase
Length = 70
Score = 131 bits (66), Expect = 1e-31
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 19 cctgccggtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaac 78
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgccagtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaac 60
Query: 79 cacggacagg 88
||||||||||
Sbjct: 61 cacggacagg 70
>31872_mmu-mir-140:mirbase
Length = 70
Score = 131 bits (66), Expect = 1e-31
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 19 cctgccggtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaac 78
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgccagtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaac 60
Query: 79 cacggacagg 88
||||||||||
Sbjct: 61 cacggacagg 70
>33990_ssc-mir-140:mirbase
Length = 70
Score = 131 bits (66), Expect = 1e-31
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 19 cctgccggtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaac 78
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgccagtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaac 60
Query: 79 cacggacagg 88
||||||||||
Sbjct: 61 cacggacagg 70
>25961_gga-mir-140:mirbase
Length = 95
Score = 129 bits (65), Expect = 4e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 18 tcctgccggtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaa 77
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcctgccagtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaa 74
Query: 78 ccacggacaggat 90
|||||||| ||||
Sbjct: 75 ccacggacgggat 87
>26472_tgu-mir-140:mirbase
Length = 72
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 18 tcctgccggtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaa 77
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tcctgccagtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaa 64
Query: 78 ccacggac 85
||||||||
Sbjct: 65 ccacggac 72
>25787_xtr-mir-140:mirbase
Length = 94
Score = 125 bits (63), Expect = 7e-30
Identities = 66/67 (98%)
Strand = Plus / Plus
Query: 26 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacggac 85
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 20 gtggttttaccctatggtaggttacgtcaggctgttctaccacagggtagaaccacggac 79
Query: 86 aggatac 92
|||||||
Sbjct: 80 aggatac 86
>34309_dre-mir-140:mirbase
Length = 105
Score = 121 bits (61), Expect = 1e-28
Identities = 64/65 (98%)
Strand = Plus / Plus
Query: 26 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacggac 85
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacggac 84
Query: 86 aggat 90
||||
Sbjct: 85 gggat 89
>26714_cfa-mir-140:mirbase
Length = 61
Score = 117 bits (59), Expect = 2e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 26 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacgga 84
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacgga 61
>27038_eca-mir-140:mirbase
Length = 61
Score = 115 bits (58), Expect = 6e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 26 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacgg 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacgg 61
>27039_eca-mir-140:mirbase
Length = 61
Score = 115 bits (58), Expect = 6e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 26 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacgg 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacgg 61
>34602_fru-mir-140:mirbase
Length = 67
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 26 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacggac 85
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 5 gtggttttaccctatggtaggtgacatcatgctgttctaccacagggtagaaccacggac 64
>34749_tni-mir-140:mirbase
Length = 67
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 26 gtggttttaccctatggtaggttacgtcatgctgttctaccacagggtagaaccacggac 85
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 5 gtggttttaccctatggtaggtgacatcatgctgttctaccacagggtagaaccacggac 64
>25493_pma-mir-140:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 26 gtggttttaccctatggtag 45
||||||||||||||||||||
Sbjct: 12 gtggttttaccctatggtag 31
