miRNEST 2.0, an integrative microRNA resource :: BLAST
>27402_mdo-mir-153-2:mirbase
Length = 87
Score = 141 bits (71), Expect = 2e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggttgccggtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgtg 116
|||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgtg 87
>27764_mml-mir-153-2:mirbase
Length = 87
Score = 141 bits (71), Expect = 2e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggtggccagtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgtg 116
|||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgtg 87
>28219_mne-mir-153-2:mirbase
Length = 87
Score = 141 bits (71), Expect = 2e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggtggccagtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgtg 116
|||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgtg 87
>28311_ggo-mir-153:mirbase
Length = 87
Score = 141 bits (71), Expect = 2e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggtggccagtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgtg 116
|||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgtg 87
>28480_hsa-mir-153-2:mirbase
Length = 87
Score = 141 bits (71), Expect = 2e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggtggccagtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgtg 116
|||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgtg 87
>30862_ppy-mir-153-2:mirbase
Length = 87
Score = 141 bits (71), Expect = 2e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggtggccagtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgtg 116
|||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgtg 87
>32760_rno-mir-153:mirbase
Length = 87
Score = 141 bits (71), Expect = 2e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggtggccagtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgtg 116
|||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgtg 87
>33241_bta-mir-153-2:mirbase
Length = 87
Score = 141 bits (71), Expect = 2e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggtggccagtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgtg 116
|||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgtg 87
>34004_ssc-mir-153:mirbase
Length = 87
Score = 141 bits (71), Expect = 2e-34
Identities = 84/87 (96%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggtggccagtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgtg 116
|||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgtg 87
>30248_ptr-mir-153:mirbase
Length = 86
Score = 139 bits (70), Expect = 6e-34
Identities = 83/86 (96%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggtggccagtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgt 115
||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgt 86
>25972_gga-mir-153:mirbase
Length = 87
Score = 133 bits (67), Expect = 4e-32
Identities = 83/87 (95%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||| ||| ||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2 gcggttgccagtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatag 60
Query: 90 tcacaaaagtgatcattggaaactgtg 116
|||||||||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattggaaactgtg 87
>25801_xtr-mir-153-2:mirbase
Length = 86
Score = 127 bits (64), Expect = 2e-30
Identities = 74/76 (97%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 40 gtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatagtcacaaaagt 99
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 12 gtgtcatttttgtgacgttgcagctagtaatatga-gcccagttgcatagtcacaaaagt 70
Query: 100 gatcattggaaactgt 115
||| ||||||||||||
Sbjct: 71 gattattggaaactgt 86
>26729_cfa-mir-153:mirbase
Length = 80
Score = 127 bits (64), Expect = 2e-30
Identities = 77/80 (96%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 30 gcggtggccggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatag 89
||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 2 gcggtggccagtgtcatttttgtgatgttgcagctagtaatatga-gcccagttgcatag 60
Query: 90 tcacaaaagtgatcattgga 109
||||||||||||||||||||
Sbjct: 61 tcacaaaagtgatcattgga 80
>31889_mmu-mir-153:mirbase
Length = 69
Score = 123 bits (62), Expect = 4e-29
Identities = 69/70 (98%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 38 cggtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatagtcacaaaa 97
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 cggtgtcatttttgtgacgttgcagctagtaatatga-gcccagttgcatagtcacaaaa 59
Query: 98 gtgatcattg 107
||||||||||
Sbjct: 60 gtgatcattg 69
>26480_tgu-mir-153-1:mirbase
Length = 72
Score = 121 bits (61), Expect = 1e-28
Identities = 71/73 (97%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 41 tgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatagtcacaaaagtg 100
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 tgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatagtcacaaaagtg 59
Query: 101 atcattggaaact 113
|||||||||||||
Sbjct: 60 atcattggaaact 72
>34324_dre-mir-153a:mirbase
Length = 81
Score = 115 bits (58), Expect = 9e-27
Identities = 71/74 (95%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 40 gtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatagtcacaaaagt 99
||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 9 gtgtcatttttgtgatgttgcagctagttatatgag-cccagttgcatagtcacaaaagt 67
Query: 100 gatcattggaaact 113
||||||||||||||
Sbjct: 68 gatcattggaaact 81
>34608_fru-mir-153a:mirbase
Length = 71
Score = 113 bits (57), Expect = 4e-26
Identities = 67/69 (97%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 40 gtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatagtcacaaaagt 99
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4 gtgtcatttttgtgatgttgcagctagtaatatgag-cccagttgcatagtcacaaaagt 62
Query: 100 gatcattgg 108
|||||||||
Sbjct: 63 gatcattgg 71
>27056_eca-mir-153:mirbase
Length = 67
Score = 111 bits (56), Expect = 1e-25
Identities = 66/68 (97%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 40 gtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatagtcacaaaagt 99
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 gtgtcatttttgtgatgttgcagctagtaatatga-gcccagttgcatagtcacaaaagt 59
Query: 100 gatcattg 107
||||||||
Sbjct: 60 gatcattg 67
>34755_tni-mir-153a:mirbase
Length = 72
Score = 85.7 bits (43), Expect = 8e-18
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 46 tttttgtgacgttgcagctagtaatatgaggcccagttgcatagtcacaaaagtgatcat 105
||||||||| ||||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct: 11 tttttgtgatgttgcagctagtaatataag-ccaagttgcatagtcacaaaagtgatcat 69
Query: 106 tgg 108
|||
Sbjct: 70 tgg 72
>34326_dre-mir-153c:mirbase
Length = 151
Score = 71.9 bits (36), Expect = 1e-13
Identities = 77/88 (87%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 40 gtgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatagtcacaaaagt 99
||||||||||||||| |||||||||||| | || || |||||||||||||||||||| |
Sbjct: 41 gtgtcatttttgtgat-ttgcagctagtagtctg-ggtccagttgcatagtcacaaaaat 98
Query: 100 gatcattggaaactgtgagtgcggcagg 127
||||||||| | ||||||||| |||||
Sbjct: 99 gatcattggtaggtgtgagtgcagcagg 126
>25501_pma-mir-153-1:mirbase
Length = 76
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 80 agttgcatagtcacaaaagtgatcattggaa 110
|||||||||||||||||||||||||||||||
Sbjct: 45 agttgcatagtcacaaaagtgatcattggaa 75
>26481_tgu-mir-153-2:mirbase
Length = 72
Score = 61.9 bits (31), Expect = 1e-10
Identities = 60/67 (89%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 42 gtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatagtcacaaaagtga 101
||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||
Sbjct: 3 gtcatttttgtgat-ttgcagctagtaatctg-gctccagttgcatagtcacaaaagtga 60
Query: 102 tcattgg 108
|| ||||
Sbjct: 61 tcgttgg 67
>27763_mml-mir-153-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 78 ccagttgcatagtcacaaaagtgatcattgg 108
|||||||||||||||||||||||||||||||
Sbjct: 50 ccagttgcatagtcacaaaagtgatcattgg 80
>28218_mne-mir-153-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 78 ccagttgcatagtcacaaaagtgatcattgg 108
|||||||||||||||||||||||||||||||
Sbjct: 50 ccagttgcatagtcacaaaagtgatcattgg 80
>28479_hsa-mir-153-1:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 78 ccagttgcatagtcacaaaagtgatcattgg 108
|||||||||||||||||||||||||||||||
Sbjct: 50 ccagttgcatagtcacaaaagtgatcattgg 80
>30861_ppy-mir-153:mirbase
Length = 90
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 78 ccagttgcatagtcacaaaagtgatcattgg 108
|||||||||||||||||||||||||||||||
Sbjct: 50 ccagttgcatagtcacaaaagtgatcattgg 80
>31508_oan-mir-153:mirbase
Length = 145
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 78 ccagttgcatagtcacaaaagtgatcattgg 108
|||||||||||||||||||||||||||||||
Sbjct: 92 ccagttgcatagtcacaaaagtgatcattgg 122
>25503_pma-mir-153-3:mirbase
Length = 78
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 76 gcccagttgcatagtcacaaaagtgatcat 105
||||||||||||||||||||||||||||||
Sbjct: 43 gcccagttgcatagtcacaaaagtgatcat 72
>27057_eca-mir-153-2:mirbase
Length = 69
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 78 ccagttgcatagtcacaaaagtgatcattg 107
||||||||||||||||||||||||||||||
Sbjct: 40 ccagttgcatagtcacaaaagtgatcattg 69
>27401_mdo-mir-153-1:mirbase
Length = 90
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 79 cagttgcatagtcacaaaagtgatcattgg 108
||||||||||||||||||||||||||||||
Sbjct: 51 cagttgcatagtcacaaaagtgatcattgg 80
>25800_xtr-mir-153-1:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 41 tgtcatttttgtgacgttgcagctagtaatatgaggcccagttgcatagtcacaaaagtg 100
|||||||||||||| |||||||| ||||| | | | ||||||||||||||||||||||
Sbjct: 13 tgtcatttttgtgat-ttgcagcttgtaattttggtctcagttgcatagtcacaaaagtg 71
Query: 101 atcat 105
|||||
Sbjct: 72 atcat 76
>33240_bta-mir-153-1:mirbase
Length = 90
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 78 ccagttgcatagtcacaaaagtgatca 104
|||||||||||||||||||||||||||
Sbjct: 50 ccagttgcatagtcacaaaagtgatca 76
>25502_pma-mir-153-2:mirbase
Length = 76
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 80 agttgcatagtcacaaaagtgatcat 105
||||||||||||||||||||||||||
Sbjct: 45 agttgcatagtcacaaaagtgatcat 70
>34609_fru-mir-153b:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ccagttgcatagtcacaaaagtgatcattgg 108
|||||||||||||||||||| ||| ||||||
Sbjct: 46 ccagttgcatagtcacaaaaatgagcattgg 76
>34756_tni-mir-153b:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ccagttgcatagtcacaaaagtgatcattgg 108
|||||||||||||||||||| ||| ||||||
Sbjct: 46 ccagttgcatagtcacaaaaatgagcattgg 76
>34826_spu-mir-153:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 agttgcatagtcacaaaagtgat 102
|||||||||||||||||||||||
Sbjct: 59 agttgcatagtcacaaaagtgat 81
>38870_lgi-mir-153:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttgcatagtcacaaaagtgatc 103
||||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgatc 82
>38755_cte-mir-153:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 ttgcatagtcacaaaagtgatc 103
||||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgatc 82
>24838_cin-mir-153:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 80 agttgcatagtcacaaaagtgatcat 105
||||||||||| ||||||||||||||
Sbjct: 64 agttgcatagtaacaaaagtgatcat 89
>34882_sko-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 ttgcatagtcacaaaagtgat 102
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>34974_isc-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 ttgcatagtcacaaaagtgat 102
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>35014_dpu-mir-153:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 ttgcatagtcacaaaagtgat 102
|||||||||||||||||||||
Sbjct: 61 ttgcatagtcacaaaagtgat 81
>38118_bma-mir-153:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 ttgcatagtcacaaaagtgat 102
|||||||||||||||||||||
Sbjct: 50 ttgcatagtcacaaaagtgat 70
>34325_dre-mir-153b:mirbase
Length = 148
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 78 ccagttgcatagtcacaaaa 97
||||||||||||||||||||
Sbjct: 77 ccagttgcatagtcacaaaa 96
