miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51986_ptc-miRf10164-akr:pmrd
Length = 111
Score = 220 bits (111), Expect = 2e-58
Identities = 111/111 (100%)
Strand = Plus / Plus
Query: 1 acgtggggttaggcgtggaagtgtcccgggccaatctgacagtggctgcagacgcggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgtggggttaggcgtggaagtgtcccgggccaatctgacagtggctgcagacgcggcca 60
Query: 61 aacccaacgtgggattaggcggggacgcgtccagacctaacacagacacgt 111
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacccaacgtgggattaggcggggacgcgtccagacctaacacagacacgt 111
>52859_ptc-miRf11037-akr:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 5e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 53 cgcggccaaacccaacgtgggattaggcggggacgcgtc 91
|||| ||| ||||||| ||||||| ||||||||||||||
Sbjct: 39 cgcgtccagacccaacatgggattgggcggggacgcgtc 1
>54019_ptc-miRf12197-akr:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 62 acccaacgtgggattaggcggggacgcgtccag 94
|||||||||||| || |||| ||||||||||||
Sbjct: 33 acccaacgtggggttgggcgcggacgcgtccag 65
>51881_ptc-miRf10059-akr:pmrd
Length = 131
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 74 attaggcggggacgcgtccagacctaac 101
|||||||| |||||||||||||| ||||
Sbjct: 128 attaggcgtggacgcgtccagacttaac 101
