miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53625_ptc-miRf11803-akr:pmrd
Length = 152
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 1 aaaccgaccggttcatttcggtttcggttttttaagcct 39
|||||||||||||| |||||||||||||||||||||||
Sbjct: 148 aaaccgaccggttcggttcggtttcggttttttaagcct 110
>53948_ptc-miRf12126-akr:pmrd
Length = 158
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 aaaccgaccggttcatttcggtttcggttttttaagcct 39
|||||||||||||| |||||||| |||||| |||||||
Sbjct: 1 aaaccgaccggttcggttcggttttggttttataagcct 39
>52446_ptc-miRf10624-akr:pmrd
Length = 158
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 aaaccgaccggttcatttcggtttcggttttttaagcct 39
|||||||||||||| |||||||| |||||| |||||||
Sbjct: 1 aaaccgaccggttcggttcggttttggttttataagcct 39
>54220_ptc-miRf12398-akr:pmrd
Length = 69
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 135 gaaccgaaactggtcggttt 154
||||||||||||||||||||
Sbjct: 17 gaaccgaaactggtcggttt 36
>53731_ptc-miRf11909-akr:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 135 gaaccgaaactggtcggttt 154
||||||||||||||||||||
Sbjct: 20 gaaccgaaactggtcggttt 39
>53395_ptc-miRf11573-akr:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 135 gaaccgaaactggtcggttt 154
||||||||||||||||||||
Sbjct: 20 gaaccgaaactggtcggttt 39
