miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53792_ptc-miRf11970-akr:pmrd
Length = 119
Score = 56.0 bits (28), Expect = 5e-09
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 34 cagctagacccaagatcgatgggtctggctgggcagccaaaccc 77
||||||||||||| |||| ||||||| |||||||||||| ||||
Sbjct: 114 cagctagacccaaaatcggtgggtctcgctgggcagccagaccc 71
>53791_ptc-miRf11969-akr:pmrd
Length = 106
Score = 56.0 bits (28), Expect = 5e-09
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 34 cagctagacccaagatcgatgggtctggctgggcagccaaaccc 77
||||||||||||| |||| ||||||| |||||||||||| ||||
Sbjct: 106 cagctagacccaaaatcggtgggtctcgctgggcagccagaccc 63
>53582_ptc-miRf11760-akr:pmrd
Length = 72
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 37 ctagacccaagatcgatgggtctggctgggca 68
|||||| |||||||||||||||| ||||||||
Sbjct: 48 ctagactcaagatcgatgggtctagctgggca 17
>52221_ptc-miRf10399-akr:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 36 gctagacccaagatcgatgggtctggctg 64
||||||||||||| || ||||||||||||
Sbjct: 105 gctagacccaagagcgttgggtctggctg 133
