miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>51996_ptc-miRf10174-akr:pmrd
          Length = 90

 Score = 91.7 bits (46), Expect = 8e-20
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                      
Query: 2  gggtctgccaagcttgccaatctcaatcaacgtgggccagacacctttgcctgatccaag 61
          ||||||||||||||||||| || ||| |||| |||  ||||||||||||||||| |||||
Sbjct: 1  gggtctgccaagcttgccagtcccaaccaacatggatcagacacctttgcctgacccaag 60

                                
Query: 62 taatatgggtctggcaaccttg 83
          |||| |||||||||||| ||||
Sbjct: 61 taatgtgggtctggcaagcttg 82




>52882_ptc-miRf11060-akr:pmrd
          Length = 98

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                              
Query: 57 ccaagtaatatgggtctggcaaccttggcagaccca 92
          |||||||| ||||||||||||| ||||  |||||||
Sbjct: 92 ccaagtaacatgggtctggcaagcttgcaagaccca 57