miRNEST 2.0, an integrative microRNA resource :: BLAST
>41424_ptc-MIR394b:mirbase
Length = 147
Score = 75.8 bits (38), Expect = 2e-14
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtggagctctgttggtatctctttgtaaaaccct 265
|||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaaccgagctctgttggtctctctttgtaaaaccct 142
Score = 60.0 bits (30), Expect = 9e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 16 aaagggtttctcacagagttccttggcattctgtccacctcc 57
||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 16 aaagggtttcttacagagtttattggcattctgtccacctcc 57
>41423_ptc-MIR394b:mirbase
Length = 147
Score = 75.8 bits (38), Expect = 2e-14
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtggagctctgttggtatctctttgtaaaaccct 265
|||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaaccgagctctgttggtctctctttgtaaaaccct 142
Score = 60.0 bits (30), Expect = 9e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 16 aaagggtttctcacagagttccttggcattctgtccacctcc 57
||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 16 aaagggtttcttacagagtttattggcattctgtccacctcc 57
>41422_ptc-MIR394a:mirbase
Length = 147
Score = 75.8 bits (38), Expect = 2e-14
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtggagctctgttggtatctctttgtaaaaccct 265
|||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaactgagctctgttggtctctctttgtaaaaccct 142
Score = 60.0 bits (30), Expect = 9e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 16 aaagggtttctcacagagttccttggcattctgtccacctcc 57
||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 16 aaagggtttcttacagagttttttggcattctgtccacctcc 57
>41421_ptc-MIR394a:mirbase
Length = 147
Score = 75.8 bits (38), Expect = 2e-14
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtggagctctgttggtatctctttgtaaaaccct 265
|||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 89 tggaggtgggcatactgccaactgagctctgttggtctctctttgtaaaaccct 142
Score = 60.0 bits (30), Expect = 9e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 16 aaagggtttctcacagagttccttggcattctgtccacctcc 57
||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 16 aaagggtttcttacagagttttttggcattctgtccacctcc 57
>41055_ghr-MIR394a:mirbase
Length = 167
Score = 61.9 bits (31), Expect = 2e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 1 tcatggtggtttaataaagggtttctcacagagttccttggcattctgtccacctcccc 59
|||||| |||||| |||||| |||| |||||||| ||||||||||||||||||||||
Sbjct: 6 tcatgggggtttagcaaagggcttcttacagagtttattggcattctgtccacctcccc 64
Score = 54.0 bits (27), Expect = 6e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtggagctctgttggtatctctttgtaaaaccctt 266
|||||||||||||||||||| | |||||||||| ||||||||||||| ||||
Sbjct: 105 tggaggtgggcatactgccaactgtgctctgttggcttctctttgtaaaatcctt 159
>42790_zma-MIR394b:mirbase
Length = 122
Score = 58.0 bits (29), Expect = 4e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 30 agagttccttggcattctgtccacctccc 58
|||||||||||||||||||||||||||||
Sbjct: 13 agagttccttggcattctgtccacctccc 41
Score = 48.1 bits (24), Expect = 4e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtggagct 239
|||||||||||||||||||| |||||||
Sbjct: 83 tggaggtgggcatactgccaatggagct 110
>41776_bdi-MIR394:mirbase
Length = 200
Score = 58.0 bits (29), Expect = 4e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtggagctctgttggtatctctttgtaaaaccc 264
|||||||||||||||||||| ||||||| ||| || || |||||||||||||
Sbjct: 125 tggaggtgggcatactgccaatggagctgtgtaggcttccctttgtaaaaccc 177
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 38 ttggcattctgtccacctcc 57
||||||||||||||||||||
Sbjct: 53 ttggcattctgtccacctcc 72
>42789_zma-MIR394a:mirbase
Length = 126
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 30 agagttccttggcattctgtccacctcc 57
||||||||||||||||||||||||||||
Sbjct: 13 agagttccttggcattctgtccacctcc 40
Score = 48.1 bits (24), Expect = 4e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtggagct 239
|||||||||||||||||||| |||||||
Sbjct: 87 tggaggtgggcatactgccaatggagct 114
>42568_sbi-MIR394a:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 30 agagttccttggcattctgtccacctcc 57
||||||||||||||||||||||||||||
Sbjct: 13 agagttccttggcattctgtccacctcc 40
>41134_tcc-MIR394a:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 9e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 18 agggtttctcacagagttccttggcattctgtccacctccc 58
|||| |||| |||||||| |||||||||||||||||||||
Sbjct: 1 agggcttcttacagagtttattggcattctgtccacctccc 41
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgcca 231
||||||||||||||||||||
Sbjct: 78 tggaggtgggcatactgcca 97
>42000_osa-MIR394:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 4e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 30 agagttccttggcattctgtccacctcc 57
||||||| ||||||||||||||||||||
Sbjct: 6 agagttctttggcattctgtccacctcc 33
Score = 48.1 bits (24), Expect = 4e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtggagct 239
|||||||||||||||||||| |||||||
Sbjct: 76 tggaggtgggcatactgccaatggagct 103
>41644_vvi-MIR394b:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 28 acagagttccttggcattctgtccacctccc 58
|||||||| |||||||||||||||||||||
Sbjct: 1 acagagtttattggcattctgtccacctccc 31
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 211 gtggaggtgggcatactgcca 231
|||||||||||||||||||||
Sbjct: 60 gtggaggtgggcatactgcca 80
>41239_csi-MIR394:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 23 ttctcacagagttccttggcattctgtccacctcc 57
|||| |||||||| ||||||||||||||||||||
Sbjct: 2 ttcttacagagtttattggcattctgtccacctcc 36
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtggagctctgttgg 246
|||||||||||||||||||| ||||||||||||
Sbjct: 105 tggaggtgggcatactgccaactgagctctgttgg 139
>40472_gma-MIR394b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 6e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 28 acagagttccttggcattctgtccacctcc 57
|||||||| ||||||||||||||||||||
Sbjct: 3 acagagtttattggcattctgtccacctcc 32
>40471_gma-MIR394a:mirbase
Length = 157
Score = 44.1 bits (22), Expect = 6e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 28 acagagttccttggcattctgtccacctcc 57
|||||||| ||||||||||||||||||||
Sbjct: 29 acagagtttattggcattctgtccacctcc 58
>40078_ath-MIR394b:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 6e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 28 acagagttccttggcattctgtccacctcc 57
|||||| || ||||||||||||||||||||
Sbjct: 4 acagagatctttggcattctgtccacctcc 33
Score = 40.1 bits (20), Expect = 9e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 213 ggaggtgggcatactgccagtggagctctgtt 244
||||||||||||||||||| | ||| ||||||
Sbjct: 88 ggaggtgggcatactgccaatagagatctgtt 119
>39868_aly-MIR394b:mirbase
Length = 160
Score = 44.1 bits (22), Expect = 6e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 28 acagagttccttggcattctgtccacctcc 57
|||||| || ||||||||||||||||||||
Sbjct: 31 acagagatctttggcattctgtccacctcc 60
>39867_aly-MIR394a:mirbase
Length = 220
Score = 44.1 bits (22), Expect = 6e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 16 aaagggtttctcacagagttccttggcattctgtccacctcc 57
|||| |||||| ||||| || ||||||||||||||||||||
Sbjct: 46 aaagagtttcttacagacatctttggcattctgtccacctcc 87
>42569_sbi-MIR394b:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 37 cttggcattctgtccacctcc 57
|||||||||||||||||||||
Sbjct: 1 cttggcattctgtccacctcc 21
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 212 tggaggtgggcatactgccagtgga 236
|||||||||||||||||||| ||||
Sbjct: 53 tggaggtgggcatactgccaatgga 77
>41645_vvi-MIR394c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 38 ttggcattctgtccacctcc 57
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>41643_vvi-MIR394a:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 38 ttggcattctgtccacctcc 57
||||||||||||||||||||
Sbjct: 11 ttggcattctgtccacctcc 30
>41135_tcc-MIR394b:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 38 ttggcattctgtccacctcc 57
||||||||||||||||||||
Sbjct: 21 ttggcattctgtccacctcc 40
>41056_ghr-MIR394b:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 38 ttggcattctgtccacctcc 57
||||||||||||||||||||
Sbjct: 35 ttggcattctgtccacctcc 54
>40402_ahy-MIR394:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 38 ttggcattctgtccacctcc 57
||||||||||||||||||||
Sbjct: 22 ttggcattctgtccacctcc 41
>40077_ath-MIR394a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 9e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 38 ttggcattctgtccacctcc 57
||||||||||||||||||||
Sbjct: 14 ttggcattctgtccacctcc 33
