miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33826_oar-mir-377:mirbase
Length = 131
Score = 155 bits (78), Expect = 7e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 1 gacgtttgattcttgagcagaggttgcccttggtgaattcgctttattgatgttgaatca 60
|||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 30 gacgtttgatccttgagcagaggttgcctttggtgaattcgctttatttatgttgaatca 89
Query: 61 cacaaaggcaacttttgtttgagtatcaaa 90
||||||||||||||||||||||||||||||
Sbjct: 90 cacaaaggcaacttttgtttgagtatcaaa 119
>33827_oar-mir-377:mirbase
Length = 131
Score = 155 bits (78), Expect = 7e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 1 gacgtttgattcttgagcagaggttgcccttggtgaattcgctttattgatgttgaatca 60
|||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 30 gacgtttgatccttgagcagaggttgcctttggtgaattcgctttatttatgttgaatca 89
Query: 61 cacaaaggcaacttttgtttgagtatcaaa 90
||||||||||||||||||||||||||||||
Sbjct: 90 cacaaaggcaacttttgtttgagtatcaaa 119
>32048_mmu-mir-377:mirbase
Length = 68
Score = 135 bits (68), Expect = 6e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 14 tgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaact 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaact 60
Query: 74 tttgtttg 81
||||||||
Sbjct: 61 tttgtttg 68
>32893_rno-mir-377:mirbase
Length = 72
Score = 135 bits (68), Expect = 6e-33
Identities = 71/72 (98%)
Strand = Plus / Plus
Query: 12 cttgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaa 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaa 60
Query: 72 cttttgtttgag 83
|||||| |||||
Sbjct: 61 cttttggttgag 72
>26828_cfa-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 4e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 13 ttgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaac 72
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 73 ttttgtttg 81
|||||||||
Sbjct: 61 ttttgtttg 69
>27159_eca-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 4e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 13 ttgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaac 72
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 73 ttttgtttg 81
|||||||||
Sbjct: 61 ttttgtttg 69
>27883_mml-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 4e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 13 ttgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaac 72
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 73 ttttgtttg 81
|||||||||
Sbjct: 61 ttttgtttg 69
>28621_hsa-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 4e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 13 ttgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaac 72
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 73 ttttgtttg 81
|||||||||
Sbjct: 61 ttttgtttg 69
>30984_ppy-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 4e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 13 ttgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaac 72
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 73 ttttgtttg 81
|||||||||
Sbjct: 61 ttttgtttg 69
>33352_bta-mir-377:mirbase
Length = 69
Score = 129 bits (65), Expect = 4e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 13 ttgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaac 72
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaac 60
Query: 73 ttttgtttg 81
|||||||||
Sbjct: 61 ttttgtttg 69
>30357_ptr-mir-377:mirbase
Length = 68
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 14 tgagcagaggttgcccttggtgaattcgctttattgatgttgaatcacacaaaggcaact 73
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 tgagcagaggttgcccttggtgaattcgctttatttatgttgaatcacacaaaggcaact 60
Query: 74 tttgtttg 81
||||||||
Sbjct: 61 tttgtttg 68
