miRNEST 2.0, an integrative microRNA resource :: BLAST
>53994_ptc-miRf12172-akr:pmrd
Length = 153
Score = 157 bits (79), Expect = 3e-39
Identities = 127/151 (84%)
Strand = Plus / Minus
Query: 1 cagtggagactccactgttcacgttgaagaacagtggagcgcagctccctcaccaccgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cagtggagactccactgttcacgttgaagaacagtggagcgcagctccctcaccaccgcc 93
Query: 61 cagggccgccgccnnnnnnnnnnnnnnnnnnnnnnnntcttctgcaccatgtctccactg 120
||||||||||||| |||||||||||||||||||||||
Sbjct: 92 cagggccgccgcccctcctcctcctcctcctcctccttcttctgcaccatgtctccactg 33
Query: 121 ttctgcaacgtgaacagtggagtctccactg 151
|||||||||||||||||||||||||||||||
Sbjct: 32 ttctgcaacgtgaacagtggagtctccactg 2
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 cagtggagactccactgttcacgttgaagaacagtggag 39
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 2 cagtggagactccactgttcacgttgcagaacagtggag 40
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 113 ctccactgttctgcaacgtgaacagtggagtctccactg 151
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 114 ctccactgttcttcaacgtgaacagtggagtctccactg 152
>54289_ptc-miRf12467-akr:pmrd
Length = 158
Score = 121 bits (61), Expect = 2e-28
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 1 cagtggagactccactgttcacgttgaagaacagtggagcgcagctccctcaccaccgcc 60
|||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 3 cagtggagtctccactgttcacgttgcagaacagtggagcgcggctccctcaccaccgcc 62
Query: 61 cagggccgccgcc 73
|||||||||||||
Sbjct: 63 cagggccgccgcc 75
Score = 107 bits (54), Expect = 2e-24
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 98 tcttctgcaccatgtctccactgttctgcaacgtgaacagtggagtctccactg 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 tcttctgcaccatgtctccactgttctgcaacgtgaacagtggagtctccactg 156
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 113 ctccactgttctgcaacgtgaacagtggagtctccactg 151
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 41 ctccactgttctgcaacgtgaacagtggagactccactg 3
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 1 cagtggagactccactgttcacgttgaagaacagtggag 39
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 156 cagtggagactccactgttcacgttgcagaacagtggag 118
>53517_ptc-miRf11695-akr:pmrd
Length = 158
Score = 121 bits (61), Expect = 2e-28
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 1 cagtggagactccactgttcacgttgaagaacagtggagcgcagctccctcaccaccgcc 60
|||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 156 cagtggagtctccactgttcacgttgcagaacagtggagcgcggctccctcaccaccgcc 97
Query: 61 cagggccgccgcc 73
|||||||||||||
Sbjct: 96 cagggccgccgcc 84
Score = 107 bits (54), Expect = 2e-24
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 98 tcttctgcaccatgtctccactgttctgcaacgtgaacagtggagtctccactg 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 tcttctgcaccatgtctccactgttctgcaacgtgaacagtggagtctccactg 3
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 cagtggagactccactgttcacgttgaagaacagtggag 39
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 3 cagtggagactccactgttcacgttgcagaacagtggag 41
Score = 69.9 bits (35), Expect = 5e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 113 ctccactgttctgcaacgtgaacagtggagtctccactg 151
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 118 ctccactgttctgcaacgtgaacagtggagactccactg 156
>53518_ptc-miRf11696-akr:pmrd
Length = 150
Score = 117 bits (59), Expect = 2e-27
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 3 gtggagactccactgttcacgttgaagaacagtggagcgcagctccctcaccaccgccca 62
|||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 150 gtggagtctccactgttcacgttgcagaacagtggagcgcggctccctcaccaccgccca 91
Query: 63 gggccgccgcc 73
|||||||||||
Sbjct: 90 gggccgccgcc 80
Score = 103 bits (52), Expect = 4e-23
Identities = 52/52 (100%)
Strand = Plus / Minus
Query: 98 tcttctgcaccatgtctccactgttctgcaacgtgaacagtggagtctccac 149
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 tcttctgcaccatgtctccactgttctgcaacgtgaacagtggagtctccac 1
Score = 65.9 bits (33), Expect = 8e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 3 gtggagactccactgttcacgttgaagaacagtggag 39
|||||||||||||||||||||||| ||||||||||||
Sbjct: 1 gtggagactccactgttcacgttgcagaacagtggag 37
Score = 65.9 bits (33), Expect = 8e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 113 ctccactgttctgcaacgtgaacagtggagtctccac 149
|||||||||||||||||||||||||||||| ||||||
Sbjct: 114 ctccactgttctgcaacgtgaacagtggagactccac 150
>52349_ptc-miRf10527-akr:pmrd
Length = 147
Score = 103 bits (52), Expect = 4e-23
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 10 ctccactgttcacgttgaagaacagtggagcgcagctccctcaccaccgcccagggccgc 69
||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 144 ctccactgttcacgtagcagaacagtggaccgcagctccctcaccaccgcccagggccgc 85
Query: 70 cgcc 73
||||
Sbjct: 84 cgcc 81
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 114 tccactgttctgcaacgtgaacagtggag 142
||||||||||||| |||||||||||||||
Sbjct: 116 tccactgttctgctacgtgaacagtggag 144
>53342_ptc-miRf11520-akr:pmrd
Length = 115
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 98 tcttctgcaccatgtctccactgttctgcaacgtgaacagt 138
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 75 tcttctgcaccatgtctccactgttctgctacgtgaacagt 115
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 106 accatgtctccactgttctgcaacgtgaaca 136
||||||||||||||||||| |||||||||||
Sbjct: 33 accatgtctccactgttcttcaacgtgaaca 3
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 tgttcacgttgaagaacagtggag 39
||||||||||||||||||||||||
Sbjct: 3 tgttcacgttgaagaacagtggag 26
>53796_ptc-miRf11974-akr:pmrd
Length = 171
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 112 tctccactgttctgcaacgtgaacagt 138
||||||||||||||||| |||||||||
Sbjct: 41 tctccactgttctgcaaagtgaacagt 15
