miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51848_ptc-miRf10026-akr:pmrd
Length = 99
Score = 165 bits (83), Expect = 7e-42
Identities = 92/95 (96%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3 tttaccgacggattaattccgttggtgatagccatgaaatccgtcggtgaaagaaatacc 62
Query: 61 gacggcttcaccgacggaatctatccgtcggtgaa 95
|||||||||||||||||||||||||||||||||||
Sbjct: 63 gacggcttcaccgacggaatctatccgtcggtgaa 97
>52088_ptc-miRf10266-akr:pmrd
Length = 99
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3 tttaccgacggattaattccgtcggtgataaacatgaaatccgtcggtgaaagaaatacc 62
Query: 61 gacggcttcaccgacggaatctatccgtcggtgaa 95
|||||||||||||||||||||||||||||||||||
Sbjct: 63 gacggcttcaccgacggaatctatccgtcggtgaa 97
>53262_ptc-miRf11440-akr:pmrd
Length = 104
Score = 111 bits (56), Expect = 9e-26
Identities = 83/92 (90%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 99 tttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaatacc 40
Query: 61 gacggcttcaccgacggaatctatccgtcggt 92
||||| |||||||||||| || |||||||||
Sbjct: 39 gacggattcaccgacggactcgttccgtcggt 8
>53194_ptc-miRf11372-akr:pmrd
Length = 104
Score = 111 bits (56), Expect = 9e-26
Identities = 83/92 (90%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 99 tttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaatacc 40
Query: 61 gacggcttcaccgacggaatctatccgtcggt 92
||||| |||||||||||| || |||||||||
Sbjct: 39 gacggattcaccgacggactcgttccgtcggt 8
>54297_ptc-miRf12475-akr:pmrd
Length = 104
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 99 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaatacc 40
Query: 61 gacggcttcaccgacggaa 79
|||||||||||||||||||
Sbjct: 39 gacggcttcaccgacggaa 21
>53882_ptc-miRf12060-akr:pmrd
Length = 104
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 99 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaatacc 40
Query: 61 gacggcttcaccgacggaa 79
|||||||||||||||||||
Sbjct: 39 gacggcttcaccgacggaa 21
>53526_ptc-miRf11704-akr:pmrd
Length = 98
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 3 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaatacc 62
Query: 61 gacggcttcaccgacggaa 79
|||||||||||||||||||
Sbjct: 63 gacggcttcaccgacggaa 81
>53345_ptc-miRf11523-akr:pmrd
Length = 104
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 99 tttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaatacc 40
Query: 61 gacggcttcaccgacggaa 79
||||| |||||||||||||
Sbjct: 39 gacggattcaccgacggaa 21
>53326_ptc-miRf11504-akr:pmrd
Length = 93
Score = 109 bits (55), Expect = 4e-25
Identities = 82/91 (90%)
Strand = Plus / Minus
Query: 2 ttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaataccg 61
||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||||
Sbjct: 93 ttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaataccg 34
Query: 62 acggcttcaccgacggaatctatccgtcggt 92
|||||||||||||||||| ||||||||||
Sbjct: 33 acggcttcaccgacggaagtgatccgtcggt 3
>53027_ptc-miRf11205-akr:pmrd
Length = 98
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 3 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaatacc 62
Query: 61 gacggcttcaccgacggaa 79
|||||||||||||||||||
Sbjct: 63 gacggcttcaccgacggaa 81
>53681_ptc-miRf11859-akr:pmrd
Length = 99
Score = 103 bits (52), Expect = 2e-23
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 97 tttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaacaatacc 38
Query: 61 gacggcttcaccgacggaatctatccgtcggt 92
||||| |||||||||||| ||||||||||
Sbjct: 37 gacggactcaccgacggaagtgatccgtcggt 6
>53270_ptc-miRf11448-akr:pmrd
Length = 99
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 3 tttaccgacggattaattccgtcggtgatagcaatgaactccgtcggtgaaaacaatacc 62
Query: 61 gacggcttcaccgacgga 78
||||| ||||||||||||
Sbjct: 63 gacggattcaccgacgga 80
>52114_ptc-miRf10292-akr:pmrd
Length = 99
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 3 tttaccgacggattaattccgtcggtgatagcaatgaactccgtcggtgaaaacaatacc 62
Query: 61 gacggcttcaccgacgga 78
||||| ||||||||||||
Sbjct: 63 gacggattcaccgacgga 80
>54335_ptc-miRf12513-akr:pmrd
Length = 99
Score = 95.6 bits (48), Expect = 5e-21
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 97 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaatacc 38
Query: 61 gacggcttcaccgacggaatctatccgtcggt 92
||||| |||||||||||| ||||||||||
Sbjct: 37 gacggactcaccgacggaagtgatccgtcggt 6
>52858_ptc-miRf11036-akr:pmrd
Length = 99
Score = 95.6 bits (48), Expect = 5e-21
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 97 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaatacc 38
Query: 61 gacggcttcaccgacggaatctatccgtcggt 92
||||| |||||||||||| ||||||||||
Sbjct: 37 gacggactcaccgacggaagtgatccgtcggt 6
>54061_ptc-miRf12239-akr:pmrd
Length = 104
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||| ||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 99 tttaccgacggattaattccatcggtgaaagcaatgaaatccgtcggtgaaaacaatacc 40
Query: 61 gacggcttcaccgacggaa 79
||||| |||||||||||||
Sbjct: 39 gacggattcaccgacggaa 21
>53487_ptc-miRf11665-akr:pmrd
Length = 99
Score = 87.7 bits (44), Expect = 1e-18
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| || ||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 97 tttaccgacggattcattccgtcggtgacagcaatgaaatccgtcggtgaaaataatacc 38
Query: 61 gacggcttcaccgacggaatctatccgtcggt 92
||||| |||||||||||| | |||||||||
Sbjct: 37 gacggactcaccgacggaaccattccgtcggt 6
>53106_ptc-miRf11284-akr:pmrd
Length = 104
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 13 ttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcacc 72
|||||||||||||||| ||| |||||||| |||||||||| ||||||||||| ||||||
Sbjct: 87 ttaattccgtcggtgacagcaatgaaatctgtcggtgaaaacaataccgacggattcacc 28
Query: 73 gacggaatctatccgtcggt 92
||||||| ||||||||||
Sbjct: 27 gacggaagtgatccgtcggt 8
>52831_ptc-miRf11009-akr:pmrd
Length = 105
Score = 87.7 bits (44), Expect = 1e-18
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| | | || |||||||||||||||| ||||||
Sbjct: 100 tttaccgacggattaattccgtcggtgacaacaattaaatccgtcggtgaaaacaatacc 41
Query: 61 gacggcttcaccgacggaatctatccgtcggt 92
||||| ||||||||||||| ||||||||||
Sbjct: 40 gacggattcaccgacggaagtgatccgtcggt 9
>52619_ptc-miRf10797-akr:pmrd
Length = 99
Score = 87.7 bits (44), Expect = 1e-18
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| || ||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 3 tttaccgacggattcattccgtcggtgacagcaatgaaatccgtcggtgaaaataatacc 62
Query: 61 gacggcttcaccgacggaatctatccgtcggt 92
||||| |||||||||||| | |||||||||
Sbjct: 63 gacggactcaccgacggaaccattccgtcggt 94
>53254_ptc-miRf11432-akr:pmrd
Length = 98
Score = 85.7 bits (43), Expect = 5e-18
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| ||||||||||||||| ||| ||| ||||||||||||||| |||||||
Sbjct: 3 tttaccgacggactaattccgtcggtgacagcaatgcaatccgtcggtgaaacaaatacc 62
Query: 61 gacggcttcaccgacggaa 79
|||||| |||| |||||||
Sbjct: 63 gacggcatcacagacggaa 81
>52517_ptc-miRf10695-akr:pmrd
Length = 104
Score = 85.7 bits (43), Expect = 5e-18
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| ||||||||||||||| ||| ||| ||||||||||||||| |||||||
Sbjct: 99 tttaccgacggactaattccgtcggtgacagcaatgcaatccgtcggtgaaacaaatacc 40
Query: 61 gacggcttcaccgacggaa 79
|||||| |||| |||||||
Sbjct: 39 gacggcatcacagacggaa 21
>53438_ptc-miRf11616-akr:pmrd
Length = 99
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| || ||||||||||||||||| || || ||||||||||||| ||||||
Sbjct: 97 tttaccgacgggttcattccgtcggtgatagcaattaactccgtcggtgaaaacaatacc 38
Query: 61 gacggcttcaccgacgga 78
||||| ||||||||||||
Sbjct: 37 gacggattcaccgacgga 20
>53168_ptc-miRf11346-akr:pmrd
Length = 98
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 14 taattccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcaccg 73
|||||||||||||||||| ||||||||||||||||||| || |||||||||| ||| ||
Sbjct: 16 taattccgtcggtgataggaatgaaatccgtcggtgaaataattaccgacggcctcatcg 75
Query: 74 acggaa 79
||||||
Sbjct: 76 acggaa 81
>52637_ptc-miRf10815-akr:pmrd
Length = 87
Score = 81.8 bits (41), Expect = 8e-17
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| | |||||
Sbjct: 3 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacatacc 62
Query: 61 gacgg 65
|||||
Sbjct: 63 gacgg 67
>53918_ptc-miRf12096-akr:pmrd
Length = 99
Score = 79.8 bits (40), Expect = 3e-16
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| ||||||||||| ||||||| ||||||
Sbjct: 97 tttaccgacggattaattccgtcggtgacagcaatgaaatccgttggtgaaaacaatacc 38
Query: 61 gacggcttcaccgacggaatctatccgtcggt 92
||| | |||||||||||| ||||||||||
Sbjct: 37 gacagactcaccgacggaagtgatccgtcggt 6
>52255_ptc-miRf10433-akr:pmrd
Length = 104
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| ||||||||||||||| | | ||||||||||||||||||| || ||||
Sbjct: 99 tttaccgacggactaattccgtcggtgacaacaatgaaatccgtcggtgaaataattacc 40
Query: 61 gacggcttcaccgacggaa 79
|||||| ||||| ||||||
Sbjct: 39 gacggcctcacctacggaa 21
>52376_ptc-miRf10554-akr:pmrd
Length = 99
Score = 75.8 bits (38), Expect = 5e-15
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||| |
Sbjct: 3 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaatatc 62
Query: 61 gacggcttcaccgacgga 78
||||| ||||| |||||
Sbjct: 63 gacggactcaccaacgga 80
>52325_ptc-miRf10503-akr:pmrd
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 3 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaatcatacc 62
Query: 61 gacgg 65
|||||
Sbjct: 63 gacgg 67
>53602_ptc-miRf11780-akr:pmrd
Length = 100
Score = 71.9 bits (36), Expect = 8e-14
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| ||||||||||||||| || ||||||||||||||||||| | ||||
Sbjct: 4 tttaccgacggactaattccgtcggtgacaggaatgaaatccgtcggtgaaatcattacc 63
Query: 61 gacggcttcaccgacg 76
|||||| |||||||||
Sbjct: 64 gacggcctcaccgacg 79
>53422_ptc-miRf11600-akr:pmrd
Length = 91
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 14 taattccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcaccg 73
||||||||||||||| || ||||| ||||||||||||| || |||||||||| ||| ||
Sbjct: 12 taattccgtcggtgacaggaatgaactccgtcggtgaaataattaccgacggcctcatcg 71
Query: 74 acggaa 79
||||||
Sbjct: 72 acggaa 77
>52673_ptc-miRf10851-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| ||||||||||||||| ||| ||||||||||||||| ||| ||||||
Sbjct: 3 tttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataatacc 62
Query: 61 gacggcttcaccgacgga 78
||||| || ||||||||
Sbjct: 63 gacggactcgccgacgga 80
>52166_ptc-miRf10344-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 14 taattccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcaccg 73
||||||||||||||| || ||||| ||||||||||||| || |||||||||| ||| ||
Sbjct: 16 taattccgtcggtgacaggaatgaactccgtcggtgaaataattaccgacggcctcatcg 75
Query: 74 acggaa 79
||||||
Sbjct: 76 acggaa 81
>53644_ptc-miRf11822-akr:pmrd
Length = 91
Score = 65.9 bits (33), Expect = 5e-12
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 16 attccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcaccgac 75
||||||||||||| ||| ||| ||||||||||||||| |||||||||| ||||||||
Sbjct: 78 attccgtcggtgaaagcaatgcaatccgtcggtgaaaatcataccgacggactcaccgac 19
Query: 76 ggaat 80
|||||
Sbjct: 18 ggaat 14
>52912_ptc-miRf11090-akr:pmrd
Length = 99
Score = 65.9 bits (33), Expect = 5e-12
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 16 attccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcaccgac 75
||||||||||||| || ||||||||||||||||||| |||||| |||| ||||||||
Sbjct: 18 attccgtcggtgacagtaatgaaatccgtcggtgaaaataataccaacggaatcaccgac 77
Query: 76 ggaatctatccgtcggt 92
|||| | |||||||||
Sbjct: 78 ggaacccgtccgtcggt 94
>52732_ptc-miRf10910-akr:pmrd
Length = 91
Score = 65.9 bits (33), Expect = 5e-12
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 16 attccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcaccgac 75
||||||||||||| ||| ||| ||||||||||||||| |||||||||| ||||||||
Sbjct: 78 attccgtcggtgaaagcaatgcaatccgtcggtgaaaatcataccgacggactcaccgac 19
Query: 76 ggaat 80
|||||
Sbjct: 18 ggaat 14
>52567_ptc-miRf10745-akr:pmrd
Length = 99
Score = 65.9 bits (33), Expect = 5e-12
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 16 attccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcaccgac 75
|||||||||||||||| || || || |||||||||| || |||||| ||| ||||||||
Sbjct: 18 attccgtcggtgatagaaatcaactctgtcggtgaaataattaccgatggcctcaccgac 77
Query: 76 ggaatctatccgtcggt 92
|||| |||||||||||
Sbjct: 78 ggaacatatccgtcggt 94
>54104_ptc-miRf12282-akr:pmrd
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaa 52
|||||||||| |||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 3 tttaccgacggattaattccgtcggtgacagcaatgcaatccgtcggtgaaa 54
>52264_ptc-miRf10442-akr:pmrd
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||||||||| ||| |||||||||||||| ||| ||||||
Sbjct: 3 tttaccgacggattaattccgtcggtgacagcattgaaatccgtcggtaaaaacaatacc 62
Query: 61 gacg 64
||||
Sbjct: 63 gacg 66
>53349_ptc-miRf11527-akr:pmrd
Length = 105
Score = 61.9 bits (31), Expect = 8e-11
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||| |||| || ||||| ||| ||||||||| || ||||
Sbjct: 6 tttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataattacc 65
Query: 61 gacggcttcaccgacggaa 79
|| ||||||||||||||||
Sbjct: 66 gatggcttcaccgacggaa 84
>52480_ptc-miRf10658-akr:pmrd
Length = 107
Score = 61.9 bits (31), Expect = 8e-11
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| ||||||||||||||| || ||||| ||||||||||||| || ||||
Sbjct: 101 tttaccgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataattacc 42
Query: 61 gacggcttcaccgacggaa 79
||||| |||| |||||||
Sbjct: 41 aacggcctcactgacggaa 23
>52071_ptc-miRf10249-akr:pmrd
Length = 105
Score = 61.9 bits (31), Expect = 8e-11
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| ||||||||||||||| || ||||| ||||||||||||| || ||||
Sbjct: 6 tttaccgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataattacc 65
Query: 61 gacggcttcaccgacggaa 79
||||| |||| |||||||
Sbjct: 66 aacggcctcactgacggaa 84
>53620_ptc-miRf11798-akr:pmrd
Length = 98
Score = 60.0 bits (30), Expect = 3e-10
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||||||| ||||| ||| ||||||||||||||||||| |||||
Sbjct: 96 tttaccgacggattaattccgt-ggtgacagcaatgaaatccgtcggtgaaaaccatacc 38
Query: 61 gacggcttcaccgacgga 78
||| | |||||||||||
Sbjct: 37 gacagaatcaccgacgga 20
>52330_ptc-miRf10508-akr:pmrd
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 16 attccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacgg 65
||||||||||||| ||| |||| |||||||||||||| |||||||||||
Sbjct: 18 attccgtcggtgacagcaatgacatccgtcggtgaaaataataccgacgg 67
>52483_ptc-miRf10661-akr:pmrd
Length = 99
Score = 58.0 bits (29), Expect = 1e-09
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 16 attccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcaccgac 75
|||| |||||||| ||| ||||||||||||||||||| |||||||||| ||||||||
Sbjct: 18 attctgtcggtgacagcaatgaaatccgtcggtgaaaatcataccgacggactcaccgac 77
Query: 76 ggaatctatccgtcggt 92
||| | |||||||||
Sbjct: 78 agaacatgtccgtcggt 94
>54224_ptc-miRf12402-akr:pmrd
Length = 105
Score = 56.0 bits (28), Expect = 5e-09
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 16 attccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcaccgac 75
||||| ||||||| || ||||| ||||||||||||| | |||||||||| ||||||||
Sbjct: 21 attccatcggtgacaggaatgaactccgtcggtgaaatatttaccgacggcctcaccgac 80
Query: 76 ggaa 79
||||
Sbjct: 81 ggaa 84
>53887_ptc-miRf12065-akr:pmrd
Length = 102
Score = 56.0 bits (28), Expect = 5e-09
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| ||||||||||||||| || ||||| ||||||||| ||| | ||||
Sbjct: 5 tttaccgacggactaattccgtcggtgaaaggcatgacctccgtcggtaaaattattacc 64
Query: 61 gacggcttcaccgacggaat 80
||||| |||||||||||||
Sbjct: 65 gacggtctcaccgacggaat 84
>52197_ptc-miRf10375-akr:pmrd
Length = 102
Score = 56.0 bits (28), Expect = 5e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggt 48
|||||||||| ||||||||||||||| || ||||||||||||||||
Sbjct: 98 tttaccgacggattaattccgtcggtgtaaggcatgaaatccgtcggt 51
>52130_ptc-miRf10308-akr:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| |||||| ||||||||||| |||||| ||||| || |||| | | ||
Sbjct: 6 tttaccgacggactaattctgtcggtgataggcatgaactccgttggagaaattattccc 65
Query: 61 gacggcttcaccgacggaat 80
||||| |||| |||||||||
Sbjct: 66 gacggtttcatcgacggaat 85
>54311_ptc-miRf12489-akr:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 17 ttccgtcggtgatagccatgaaatccgtcggtgaaagaaataccgacggcttcaccgac 75
|||||||||||| || | ||| ||| ||||||||| || |||||||||| ||||||||
Sbjct: 20 ttccgtcggtgacaggaacgaactccatcggtgaaataattaccgacggcctcaccgac 78
>53201_ptc-miRf11379-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 4e-06
Identities = 65/79 (82%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
|||||||||| ||||||||||||||| || ||| | | |||||||||| || ||||
Sbjct: 6 tttaccgacggactaattccgtcggtgacaggaatgcactttgtcggtgaaataattacc 65
Query: 61 gacggcttcaccgacggaa 79
|||||| ||||| ||||||
Sbjct: 66 gacggcctcaccaacggaa 84
>53170_ptc-miRf11348-akr:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 69 caccgacggaatctatccgtcggtga 94
|||||||||||| |||||||||||||
Sbjct: 77 caccgacggaatatatccgtcggtga 102
>54236_ptc-miRf12414-akr:pmrd
Length = 61
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 56 ataccgacggcttcaccgacggaat 80
||||||||||| |||||||||||||
Sbjct: 12 ataccgacggcatcaccgacggaat 36
>54231_ptc-miRf12409-akr:pmrd
Length = 137
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 56 ataccgacggcttcaccgacggaatctatccgtcggt 92
|||||||||| || |||||||||| |||||||||||
Sbjct: 9 ataccgacggtatcgccgacggaatgtatccgtcggt 45
>52296_ptc-miRf10474-akr:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tcaccgacggaatctatccgtcggt 92
|||||||||||||| ||||||||||
Sbjct: 71 tcaccgacggaatccatccgtcggt 95
>53407_ptc-miRf11585-akr:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 gacggaatctatccgtcggt 92
||||||||||||||||||||
Sbjct: 4 gacggaatctatccgtcggt 23
>52329_ptc-miRf10507-akr:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 57 taccgacggcttcaccgacggaatctatccgtcggt 92
|||||||||| ||||||||||| |||||||||||
Sbjct: 119 taccgacggcatcaccgacggataatatccgtcggt 84
>51991_ptc-miRf10169-akr:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaa 52
|||||||||| |||||| |||||| | || |||||| |||||||||||||
Sbjct: 3 tttaccgacggactaattctgtcggtaacaggcatgaactccgtcggtgaaa 54
