miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53602_ptc-miRf11780-akr:pmrd
Length = 100
Score = 135 bits (68), Expect = 7e-33
Identities = 89/96 (92%)
Strand = Plus / Minus
Query: 4 gtataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggattt 63
|||||||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||
Sbjct: 99 gtataccgacggacgtatttcgtcggtgaggccgtcggtaatgatttcaccgacggattt 40
Query: 64 cattgttgtcaccgacggaattagtccgtcggtaaa 99
|||| ||||||||||||||||||||||||||||||
Sbjct: 39 cattcctgtcaccgacggaattagtccgtcggtaaa 4
>53168_ptc-miRf11346-akr:pmrd
Length = 98
Score = 135 bits (68), Expect = 7e-33
Identities = 89/96 (92%)
Strand = Plus / Minus
Query: 4 gtataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggattt 63
|||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 98 gtataccgacggacgtgttccgtcgatgaggccgtcggtaattatttcaccgacggattt 39
Query: 64 cattgttgtcaccgacggaattagtccgtcggtaaa 99
|||| | |||||||||||||||||| |||||||||
Sbjct: 38 cattcctatcaccgacggaattagtctgtcggtaaa 3
>53201_ptc-miRf11379-akr:pmrd
Length = 105
Score = 133 bits (67), Expect = 3e-32
Identities = 88/95 (92%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
|||||||||||||||||||||| |||||||||||||||||||||||||||||| | | |
Sbjct: 100 tataccgacagacgtgttccgttggtgaggccgtcggtaattatttcaccgacaaagtgc 41
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
||| ||||||||||||||||||||||||||||||
Sbjct: 40 attcctgtcaccgacggaattagtccgtcggtaaa 6
>52480_ptc-miRf10658-akr:pmrd
Length = 107
Score = 133 bits (67), Expect = 3e-32
Identities = 88/95 (92%)
Strand = Plus / Plus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| |||||||||||| |||||||||| ||||||||||||||||||||| |||
Sbjct: 7 tataccgacggacgtgttccgtcagtgaggccgttggtaattatttcaccgacggagttc 66
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
||| ||||||||||||||||||||||||||||||
Sbjct: 67 attcctgtcaccgacggaattagtccgtcggtaaa 101
>52166_ptc-miRf10344-akr:pmrd
Length = 99
Score = 133 bits (67), Expect = 3e-32
Identities = 88/95 (92%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||
Sbjct: 97 tataccgacggacgtgttccgtcgatgaggccgtcggtaattatttcaccgacggagttc 38
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
||| ||||||||||||||||||||||||| ||||
Sbjct: 37 attcctgtcaccgacggaattagtccgtcgataaa 3
>52071_ptc-miRf10249-akr:pmrd
Length = 105
Score = 133 bits (67), Expect = 3e-32
Identities = 88/95 (92%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| |||||||||||| |||||||||| ||||||||||||||||||||| |||
Sbjct: 100 tataccgacggacgtgttccgtcagtgaggccgttggtaattatttcaccgacggagttc 41
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
||| ||||||||||||||||||||||||||||||
Sbjct: 40 attcctgtcaccgacggaattagtccgtcggtaaa 6
>53422_ptc-miRf11600-akr:pmrd
Length = 91
Score = 127 bits (64), Expect = 2e-30
Identities = 82/88 (93%)
Strand = Plus / Minus
Query: 7 taccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttcat 66
||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||
Sbjct: 91 taccgacggacgtgttccgtcgatgaggccgtcggtaattatttcaccgacggagttcat 32
Query: 67 tgttgtcaccgacggaattagtccgtcg 94
| |||||||||||||||||||||||||
Sbjct: 31 tcctgtcaccgacggaattagtccgtcg 4
>52517_ptc-miRf10695-akr:pmrd
Length = 104
Score = 127 bits (64), Expect = 2e-30
Identities = 94/104 (90%)
Strand = Plus / Plus
Query: 1 ctggtataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacgga 60
||||||||||||| ||||||||||| |||| |||||||||| || |||||||||||||
Sbjct: 1 ctggtataccgacgaacgtgttccgtctgtgatgccgtcggtatttgtttcaccgacgga 60
Query: 61 tttcattgttgtcaccgacggaattagtccgtcggtaaagctgg 104
|| ||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 61 ttgcattgctgtcaccgacggaattagtccgtcggtaaaactgg 104
>53254_ptc-miRf11432-akr:pmrd
Length = 98
Score = 119 bits (60), Expect = 4e-28
Identities = 87/96 (90%)
Strand = Plus / Minus
Query: 4 gtataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggattt 63
|||||||||| ||||||||||| |||| |||||||||| || |||||||||||||||
Sbjct: 98 gtataccgacgaacgtgttccgtctgtgatgccgtcggtatttgtttcaccgacggattg 39
Query: 64 cattgttgtcaccgacggaattagtccgtcggtaaa 99
||||| ||||||||||||||||||||||||||||||
Sbjct: 38 cattgctgtcaccgacggaattagtccgtcggtaaa 3
>54224_ptc-miRf12402-akr:pmrd
Length = 105
Score = 115 bits (58), Expect = 6e-27
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 10 cgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgt 69
|||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 95 cgacggacgtgttccgtcggtgaggccgtcggtaaatatttcaccgacggagttcattcc 36
Query: 70 tgtcaccgacggaattagtccgtcggtaaa 99
||||||||| ||||| ||||||||||||||
Sbjct: 35 tgtcaccgatggaatgagtccgtcggtaaa 6
>54311_ptc-miRf12489-akr:pmrd
Length = 100
Score = 111 bits (56), Expect = 1e-25
Identities = 86/96 (89%)
Strand = Plus / Minus
Query: 4 gtataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggattt 63
|||||||||| ||| ||||| || ||||||||||||||||||||||||||||| ||| ||
Sbjct: 99 gtataccgacggacttgttctgtcggtgaggccgtcggtaattatttcaccgatggagtt 40
Query: 64 cattgttgtcaccgacggaattagtccgtcggtaaa 99
| || |||||||||||||| |||||||||||||||
Sbjct: 39 cgttcctgtcaccgacggaagtagtccgtcggtaaa 4
>53349_ptc-miRf11527-akr:pmrd
Length = 105
Score = 109 bits (55), Expect = 4e-25
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||| ||| |||||||||||| ||||| ||| ||||||||||||||||||| ||| |||
Sbjct: 100 tatactgacggacgtgttccgtcggtgaagccatcggtaattatttcaccgatggagttc 41
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
||| |||||| |||||||||||||||||||||||
Sbjct: 40 attcctgtcactgacggaattagtccgtcggtaaa 6
>52673_ptc-miRf10851-akr:pmrd
Length = 99
Score = 109 bits (55), Expect = 4e-25
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| |||||| ||||| || ||| ||||||||| | ||| |||||||||||||
Sbjct: 97 tataccgacggacgtgatccgtcggcgagtccgtcggtattatttttaccgacggatttc 38
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
|||| ||||||||||||||||||||||||||||||
Sbjct: 37 attgctgtcaccgacggaattagtccgtcggtaaa 3
>52376_ptc-miRf10554-akr:pmrd
Length = 99
Score = 109 bits (55), Expect = 4e-25
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| |||||| ||||| |||||| |||||| || | |||||||||||||||||
Sbjct: 97 tataccgacggacgtgatccgttggtgagtccgtcgatattgttttcaccgacggatttc 38
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
|||| ||||||||||||||||| ||||||||||||
Sbjct: 37 attgctgtcaccgacggaattaatccgtcggtaaa 3
>54297_ptc-miRf12475-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| |||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct: 21 ttccgtcggtgaagccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 80
Query: 81 gaattagtccgtcggtaaagctgg 104
|||||| |||||||||||| ||||
Sbjct: 81 gaattaatccgtcggtaaaactgg 104
>53882_ptc-miRf12060-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| |||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct: 21 ttccgtcggtgaagccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 80
Query: 81 gaattagtccgtcggtaaagctgg 104
|||||| |||||||||||| ||||
Sbjct: 81 gaattaatccgtcggtaaaactgg 104
>54335_ptc-miRf12513-akr:pmrd
Length = 99
Score = 101 bits (51), Expect = 1e-22
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| |||||| ||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
Query: 81 gaattagtccgtcggtaaa 99
|||||| ||||||||||||
Sbjct: 79 gaattaatccgtcggtaaa 97
>53526_ptc-miRf11704-akr:pmrd
Length = 98
Score = 101 bits (51), Expect = 1e-22
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| |||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct: 81 ttccgtcggtgaagccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 22
Query: 81 gaattagtccgtcggtaaa 99
|||||| ||||||||||||
Sbjct: 21 gaattaatccgtcggtaaa 3
>53027_ptc-miRf11205-akr:pmrd
Length = 98
Score = 101 bits (51), Expect = 1e-22
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| |||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct: 81 ttccgtcggtgaagccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 22
Query: 81 gaattagtccgtcggtaaa 99
|||||| ||||||||||||
Sbjct: 21 gaattaatccgtcggtaaa 3
>52858_ptc-miRf11036-akr:pmrd
Length = 99
Score = 101 bits (51), Expect = 1e-22
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| |||||| ||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
Query: 81 gaattagtccgtcggtaaa 99
|||||| ||||||||||||
Sbjct: 79 gaattaatccgtcggtaaa 97
>53326_ptc-miRf11504-akr:pmrd
Length = 93
Score = 99.6 bits (50), Expect = 4e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| |||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct: 16 ttccgtcggtgaagccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 75
Query: 81 gaattagtccgtcggtaa 98
|||||| |||||||||||
Sbjct: 76 gaattaatccgtcggtaa 93
>53487_ptc-miRf11665-akr:pmrd
Length = 99
Score = 95.6 bits (48), Expect = 6e-21
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 20 gttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgac 79
||||||| |||||| ||||||||| | ||||||||||||||||||||| ||||||||||
Sbjct: 18 gttccgtcggtgagtccgtcggtattattttcaccgacggatttcattgctgtcaccgac 77
Query: 80 ggaattagtccgtcggtaaa 99
||||| | ||||||||||||
Sbjct: 78 ggaatgaatccgtcggtaaa 97
>52831_ptc-miRf11009-akr:pmrd
Length = 105
Score = 95.6 bits (48), Expect = 6e-21
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| ||||||||| | |||||||||||||||| ||||||||||||||||
Sbjct: 22 ttccgtcggtgaatccgtcggtattgttttcaccgacggatttaattgttgtcaccgacg 81
Query: 81 gaattagtccgtcggtaaagctgg 104
|||||| |||||||||||| ||||
Sbjct: 82 gaattaatccgtcggtaaaactgg 105
>52619_ptc-miRf10797-akr:pmrd
Length = 99
Score = 95.6 bits (48), Expect = 6e-21
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 20 gttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgac 79
||||||| |||||| ||||||||| | ||||||||||||||||||||| ||||||||||
Sbjct: 82 gttccgtcggtgagtccgtcggtattattttcaccgacggatttcattgctgtcaccgac 23
Query: 80 ggaattagtccgtcggtaaa 99
||||| | ||||||||||||
Sbjct: 22 ggaatgaatccgtcggtaaa 3
>54178_ptc-miRf12356-akr:pmrd
Length = 99
Score = 93.7 bits (47), Expect = 2e-20
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| || |||||| || ||||||| ||| |||||||||||||||||||| |||
Sbjct: 97 tataccgacggatgtgttctgtcagtgaggctgtcagtaattatttcaccgacggagttc 38
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
||| |||||||||| |||||||||| ||||||||
Sbjct: 37 attcctgtcaccgacagaattagtccatcggtaaa 3
>53681_ptc-miRf11859-akr:pmrd
Length = 99
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| |||||| ||||||||| | ||||||||||||||||||||| | |||||||||
Sbjct: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctatcaccgacg 78
Query: 81 gaattagtccgtcggtaaa 99
|||||| ||||||||||||
Sbjct: 79 gaattaatccgtcggtaaa 97
>52567_ptc-miRf10745-akr:pmrd
Length = 99
Score = 93.7 bits (47), Expect = 2e-20
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| || |||||||| ||||||||| |||||||||||||||||||| || ||
Sbjct: 97 tataccgacggatatgttccgtcggtgaggccatcggtaattatttcaccgacagagttg 38
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
||| | ||||||||||||| ||||||||||||||
Sbjct: 37 atttctatcaccgacggaatgagtccgtcggtaaa 3
>52483_ptc-miRf10661-akr:pmrd
Length = 99
Score = 93.7 bits (47), Expect = 2e-20
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| ||| ||||| || |||||| ||||||||| |||||||||||||||||
Sbjct: 97 tataccgacggacatgttctgtcggtgagtccgtcggtatgattttcaccgacggatttc 38
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
|||| |||||||||| |||| ||||||||||||||
Sbjct: 37 attgctgtcaccgacagaatgagtccgtcggtaaa 3
>52088_ptc-miRf10266-akr:pmrd
Length = 99
Score = 93.7 bits (47), Expect = 2e-20
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| |||||||||| || ||||||||||||||||||| || |||||||||
Sbjct: 81 ttccgtcggtgaagccgtcggtatttctttcaccgacggatttcatgtttatcaccgacg 22
Query: 81 gaattagtccgtcggtaaa 99
|||||| ||||||||||||
Sbjct: 21 gaattaatccgtcggtaaa 3
>54104_ptc-miRf12282-akr:pmrd
Length = 99
Score = 89.7 bits (45), Expect = 4e-19
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 7 taccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttcat 66
||||||| |||||||||||| ||||| || || ||| | ||||||||||||||| |||
Sbjct: 95 taccgacggacgtgttccgtcagtgagtccatctgtattgttttcaccgacggattgcat 36
Query: 67 tgttgtcaccgacggaattagtccgtcggtaaa 99
|| ||||||||||||||||| ||||||||||||
Sbjct: 35 tgctgtcaccgacggaattaatccgtcggtaaa 3
>53270_ptc-miRf11448-akr:pmrd
Length = 99
Score = 89.7 bits (45), Expect = 4e-19
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 7 taccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttcat 66
||||||| |||||| ||||| ||||| ||||||||| | ||||||||||||| |||||
Sbjct: 95 taccgaccgacgtgatccgtcggtgaatccgtcggtattgttttcaccgacggagttcat 36
Query: 67 tgttgtcaccgacggaattagtccgtcggtaaa 99
|| | ||||||||||||||| ||||||||||||
Sbjct: 35 tgctatcaccgacggaattaatccgtcggtaaa 3
>52637_ptc-miRf10815-akr:pmrd
Length = 87
Score = 89.7 bits (45), Expect = 4e-19
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 35 ccgtcggtaattatttcaccgacggatttcattgttgtcaccgacggaattagtccgtcg 94
||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 67 ccgtcggtatgtttttcaccgacggatttcattgctgtcaccgacggaattaatccgtcg 8
Query: 95 gtaaa 99
|||||
Sbjct: 7 gtaaa 3
>52114_ptc-miRf10292-akr:pmrd
Length = 99
Score = 89.7 bits (45), Expect = 4e-19
Identities = 81/93 (87%)
Strand = Plus / Minus
Query: 7 taccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttcat 66
||||||| |||||| ||||| ||||| ||||||||| | ||||||||||||| |||||
Sbjct: 95 taccgaccgacgtgatccgtcggtgaatccgtcggtattgttttcaccgacggagttcat 36
Query: 67 tgttgtcaccgacggaattagtccgtcggtaaa 99
|| | ||||||||||||||| ||||||||||||
Sbjct: 35 tgctatcaccgacggaattaatccgtcggtaaa 3
>53345_ptc-miRf11523-akr:pmrd
Length = 104
Score = 87.7 bits (44), Expect = 1e-18
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| ||||||||| | ||||||||||||||||||||| | |||||||||
Sbjct: 21 ttccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacg 80
Query: 81 gaattagtccgtcggtaaagctgg 104
|||||| |||||||||||| ||||
Sbjct: 81 gaattaatccgtcggtaaaactgg 104
>52325_ptc-miRf10503-akr:pmrd
Length = 87
Score = 87.7 bits (44), Expect = 1e-18
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 48 tttcaccgacggatttcattgttgtcaccgacggaattagtccgtcggtaaa 99
||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 54 tttcaccgacggatttcattgctgtcaccgacggaattaatccgtcggtaaa 3
>53918_ptc-miRf12096-akr:pmrd
Length = 99
Score = 85.7 bits (43), Expect = 6e-18
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| |||||| | ||||||| | ||||||| ||||||||||||| |||||||||||
Sbjct: 19 ttccgtcggtgagtctgtcggtattgttttcaccaacggatttcattgctgtcaccgacg 78
Query: 81 gaattagtccgtcggtaaa 99
|||||| ||||||||||||
Sbjct: 79 gaattaatccgtcggtaaa 97
>53262_ptc-miRf11440-akr:pmrd
Length = 104
Score = 85.7 bits (43), Expect = 6e-18
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 22 tccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacgg 81
||||| ||||| ||||||||| | ||||||||||||||||||||| | ||||||||||
Sbjct: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
Query: 82 aattagtccgtcggtaaagctgg 104
||||| |||||||||||| ||||
Sbjct: 82 aattaatccgtcggtaaaactgg 104
>53194_ptc-miRf11372-akr:pmrd
Length = 104
Score = 85.7 bits (43), Expect = 6e-18
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 22 tccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacgg 81
||||| ||||| ||||||||| | ||||||||||||||||||||| | ||||||||||
Sbjct: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
Query: 82 aattagtccgtcggtaaagctgg 104
||||| |||||||||||| ||||
Sbjct: 82 aattaatccgtcggtaaaactgg 104
>52912_ptc-miRf11090-akr:pmrd
Length = 99
Score = 85.7 bits (43), Expect = 6e-18
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| |||| ||||||| ||||| |||| |||| | |||||||||||||||||
Sbjct: 97 tataccgacggacgggttccgtcggtgattccgttggtattattttcaccgacggatttc 38
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
||| ||||||||||||||| | ||||||||||||
Sbjct: 37 attactgtcaccgacggaatgattccgtcggtaaa 3
>51848_ptc-miRf10026-akr:pmrd
Length = 99
Score = 85.7 bits (43), Expect = 6e-18
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| |||||||||| || ||||||||||||||||||| | | ||||| |||
Sbjct: 81 ttccgtcggtgaagccgtcggtatttctttcaccgacggatttcatggctatcaccaacg 22
Query: 81 gaattagtccgtcggtaaa 99
|||||| ||||||||||||
Sbjct: 21 gaattaatccgtcggtaaa 3
>52330_ptc-miRf10508-akr:pmrd
Length = 87
Score = 81.8 bits (41), Expect = 9e-17
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 35 ccgtcggtaattatttcaccgacggatttcattgttgtcaccgacggaattagtccgtcg 94
||||||||| | |||||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 67 ccgtcggtattattttcaccgacggatgtcattgctgtcaccgacggaatgagtccgtcg 8
Query: 95 gtaaa 99
|||||
Sbjct: 7 gtaaa 3
>54061_ptc-miRf12239-akr:pmrd
Length = 104
Score = 79.8 bits (40), Expect = 4e-16
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| ||||||||| | ||||||||||||||||||||| | ||||||| |
Sbjct: 21 ttccgtcggtgaatccgtcggtattgttttcaccgacggatttcattgctttcaccgatg 80
Query: 81 gaattagtccgtcggtaaagctgg 104
|||||| |||||||||||| ||||
Sbjct: 81 gaattaatccgtcggtaaaactgg 104
>53887_ptc-miRf12065-akr:pmrd
Length = 102
Score = 79.8 bits (40), Expect = 4e-16
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 4 gtataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggattt 63
||||||| ||||| | |||||| |||||| ||||||||||| |||| ||||||||| |
Sbjct: 100 gtataccaacagaattattccgtcggtgagaccgtcggtaataattttaccgacggaggt 41
Query: 64 cattgttgtcaccgacggaattagtccgtcggtaaa 99
||| | ||||||||||||||||||||||||||||
Sbjct: 40 catgcctttcaccgacggaattagtccgtcggtaaa 5
>53106_ptc-miRf11284-akr:pmrd
Length = 104
Score = 79.8 bits (40), Expect = 4e-16
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| ||||||||| | |||||||||| |||||||||| |||||||||||
Sbjct: 21 ttccgtcggtgaatccgtcggtattgttttcaccgacagatttcattgctgtcaccgacg 80
Query: 81 gaattagtccgtcggtaaagctgg 104
|||||| |||||| ||||| ||||
Sbjct: 81 gaattaatccgtcagtaaaactgg 104
>52264_ptc-miRf10442-akr:pmrd
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| |||||| ||||| ||| | |||||||| | ||| |||||||||||||
Sbjct: 97 tataccgacggacgtgatccgtcggtaatttcgtcggtattgtttttaccgacggatttc 38
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
| || ||||||||||||||||| ||||||||||||
Sbjct: 37 aatgctgtcaccgacggaattaatccgtcggtaaa 3
>52229_ptc-miRf10407-akr:pmrd
Length = 95
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||| |||||||||| || ||||||||||||||||||| | | |||||||||
Sbjct: 79 ttccgtcggtgaagccgtcggtatttctttcaccgacggatttcatggctatcaccgacg 20
Query: 81 gaattagtccgtcggtaaa 99
|||||| ||||||||||
Sbjct: 19 gaattaagtcgtcggtaaa 1
>53644_ptc-miRf11822-akr:pmrd
Length = 91
Score = 73.8 bits (37), Expect = 2e-14
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| |||||| ||||||||| ||||||||||||||| ||||| | |||||||||
Sbjct: 15 ttccgtcggtgagtccgtcggtatgattttcaccgacggattgcattgctttcaccgacg 74
Query: 81 gaattagtccgtcggta 97
|||| ||||||||||||
Sbjct: 75 gaatgagtccgtcggta 91
>52732_ptc-miRf10910-akr:pmrd
Length = 91
Score = 73.8 bits (37), Expect = 2e-14
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| |||||| ||||||||| ||||||||||||||| ||||| | |||||||||
Sbjct: 15 ttccgtcggtgagtccgtcggtatgattttcaccgacggattgcattgctttcaccgacg 74
Query: 81 gaattagtccgtcggta 97
|||| ||||||||||||
Sbjct: 75 gaatgagtccgtcggta 91
>53620_ptc-miRf11798-akr:pmrd
Length = 98
Score = 71.9 bits (36), Expect = 9e-14
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 48 tttcaccgacggatttcattgttgtcaccgacggaattagtccgtcggtaaa 99
||||||||||||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 46 tttcaccgacggatttcattgctgtcacc-acggaattaatccgtcggtaaa 96
>51991_ptc-miRf10169-akr:pmrd
Length = 99
Score = 69.9 bits (35), Expect = 3e-13
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 29 gtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacggaattagt 88
||||| ||||||| ||| |||||||||||||| ||||| ||| |||||| ||||||||
Sbjct: 73 gtgagaccgtcgggaataatttcaccgacggagttcatgcctgttaccgacagaattagt 14
Query: 89 ccgtcggtaaa 99
|||||||||||
Sbjct: 13 ccgtcggtaaa 3
>52130_ptc-miRf10308-akr:pmrd
Length = 108
Score = 61.9 bits (31), Expect = 8e-11
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 5 tataccgacagacgtgttccgtaggtgaggccgtcggtaattatttcaccgacggatttc 64
||||||||| ||||| |||||| | ||| ||||||| ||| ||||| || ||||| |||
Sbjct: 100 tataccgacggacgtattccgtcgatgaaaccgtcgggaataatttctccaacggagttc 41
Query: 65 attgttgtcaccgacggaattagtccgtcggtaaa 99
|| | |||||||| |||||||||||||||||||
Sbjct: 40 atgcctatcaccgacagaattagtccgtcggtaaa 6
>52197_ptc-miRf10375-akr:pmrd
Length = 102
Score = 54.0 bits (27), Expect = 2e-08
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
|||||| ||||||| |||||| || || | ||||||||||||||| | ||||||||
Sbjct: 20 ttccgtcggtgaggtcgtcgggaaaaatgttaccgacggatttcatgccttacaccgacg 79
Query: 81 gaattagtccgtcggtaaa 99
|||||| ||||||||||||
Sbjct: 80 gaattaatccgtcggtaaa 98
>53438_ptc-miRf11616-akr:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 8e-08
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 22 tccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacgg 81
||||| ||||| ||||||||| | ||||||||||||| || |||| | ||||||||||
Sbjct: 20 tccgtcggtgaatccgtcggtattgttttcaccgacggagttaattgctatcaccgacgg 79
Query: 82 aattagtccgtcggtaaa 99
||| | |||||||||||
Sbjct: 80 aatgaacccgtcggtaaa 97
>52492_ptc-miRf10670-akr:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 74 accgacggaattagtccgtcggta 97
||||||||||||||||||||||||
Sbjct: 98 accgacggaattagtccgtcggta 75
>53978_ptc-miRf12156-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 73 caccgacggaattagtccgtcggtaaa 99
||||||||||||| |||||||||||||
Sbjct: 72 caccgacggaatttgtccgtcggtaaa 98
>52594_ptc-miRf10772-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 73 caccgacggaattagtccgtcggtaaa 99
||||||||||||| |||||||||||||
Sbjct: 72 caccgacggaatttgtccgtcggtaaa 98
>52463_ptc-miRf10641-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 73 caccgacggaattagtccgtcggtaaa 99
||||||||||||| |||||||||||||
Sbjct: 72 caccgacggaatttgtccgtcggtaaa 98
>52296_ptc-miRf10474-akr:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 73 caccgacggaattagtccgtcggtaaa 99
|||||||||||||| ||||||||||||
Sbjct: 30 caccgacggaattaatccgtcggtaaa 4
>52553_ptc-miRf10731-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 72 tcaccgacggaattagtccgtcggta 97
||||||||||||||| ||||||||||
Sbjct: 101 tcaccgacggaattattccgtcggta 76
>51866_ptc-miRf10044-akr:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 72 tcaccgacggaattagtccgtcggta 97
||||||||||||||| ||||||||||
Sbjct: 106 tcaccgacggaattattccgtcggta 81
>53679_ptc-miRf11857-akr:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 73 caccgacggaattagtccgtcggta 97
|||||||||||||| ||||||||||
Sbjct: 1 caccgacggaattattccgtcggta 25
>53220_ptc-miRf11398-akr:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 74 accgacggaattagtccgtcggtaa 98
||||||||||||| |||||||||||
Sbjct: 102 accgacggaattattccgtcggtaa 78
>54196_ptc-miRf12374-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 accgacggaattagtccgtcggta 97
||||||||||||| ||||||||||
Sbjct: 9 accgacggaattattccgtcggta 32
>53599_ptc-miRf11777-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 accgacggaattagtccgtcggta 97
||||||||||| ||||||||||||
Sbjct: 9 accgacggaataagtccgtcggta 32
>53325_ptc-miRf11503-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 accgacggaattagtccgtcggta 97
||||||||||||| ||||||||||
Sbjct: 9 accgacggaattattccgtcggta 32
>53006_ptc-miRf11184-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 72 tcaccgacggaattagtccgtcgg 95
||||||||||||| ||||||||||
Sbjct: 31 tcaccgacggaataagtccgtcgg 8
>52542_ptc-miRf10720-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 74 accgacggaattagtccgtcggta 97
||||||||||||| ||||||||||
Sbjct: 101 accgacggaattattccgtcggta 78
>52164_ptc-miRf10342-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 74 accgacggaattagtccgtcggta 97
||||||||||||| ||||||||||
Sbjct: 101 accgacggaattattccgtcggta 78
>51978_ptc-miRf10156-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 72 tcaccgacggaattagtccgtcgg 95
||||||||||||| ||||||||||
Sbjct: 31 tcaccgacggaataagtccgtcgg 8
