miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53871_ptc-miRf12049-akr:pmrd
Length = 140
Score = 278 bits (140), Expect = 1e-75
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 1 tttccaggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttccaggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttt 60
Query: 61 tccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcct 120
Query: 121 ggaaagtgaattccgggaaa 140
||||||||||||||||||||
Sbjct: 121 ggaaagtgaattccgggaaa 140
>53870_ptc-miRf12048-akr:pmrd
Length = 140
Score = 278 bits (140), Expect = 1e-75
Identities = 140/140 (100%)
Strand = Plus / Plus
Query: 1 tttccaggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttccaggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttt 60
Query: 61 tccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcct 120
Query: 121 ggaaagtgaattccgggaaa 140
||||||||||||||||||||
Sbjct: 121 ggaaagtgaattccgggaaa 140
>51977_ptc-miRf10155-akr:pmrd
Length = 140
Score = 226 bits (114), Expect = 3e-60
Identities = 126/130 (96%)
Strand = Plus / Plus
Query: 5 caggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccg 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5 caggaaaacactttcctggaaaccaagccaaatttttctttgactggaaagtgttttccg 64
Query: 65 ttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcctggaa 124
|||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 65 ttgaccaacttttctaatggcaaacaaacacaggaaagtttggaaagtggtttcttggaa 124
Query: 125 agtgaattcc 134
||||||||||
Sbjct: 125 agtgaattcc 134
>52589_ptc-miRf10767-akr:pmrd
Length = 155
Score = 222 bits (112), Expect = 5e-59
Identities = 133/140 (95%)
Strand = Plus / Plus
Query: 1 tttccaggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttt 60
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 8 tttcaaggaaaacactttcctggaaaccaagctaaattttcctttgactggaaagtgttt 67
Query: 61 tccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcct 120
|||||||||||||||||||||||||| ||||||| | ||||||||||||||||| ||||
Sbjct: 68 tccgttgaccaacttttctaatggcagacaaacacaggaaagtttggaaagtggcttccc 127
Query: 121 ggaaagtgaattccgggaaa 140
||||||||||||||||||||
Sbjct: 128 ggaaagtgaattccgggaaa 147
>52118_ptc-miRf10296-akr:pmrd
Length = 140
Score = 222 bits (112), Expect = 5e-59
Identities = 133/140 (95%)
Strand = Plus / Plus
Query: 1 tttccaggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttccaggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttt 60
Query: 61 tccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcct 120
|||||||||||||||| ||| ||||||| ||||| | ||||||||||||||||||||||
Sbjct: 61 tccgttgaccaactttcctagtggcaaataaacacaggaaagtttggaaagtggtttccc 120
Query: 121 ggaaagtgaattccgggaaa 140
|||||||||||||| |||||
Sbjct: 121 ggaaagtgaattccaggaaa 140
>54345_ptc-miRf12523-akr:pmrd
Length = 231
Score = 206 bits (104), Expect = 3e-54
Identities = 131/140 (93%)
Strand = Plus / Minus
Query: 1 tttccaggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttt 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 151 tttccaggaaaacactttcctggaaatcaagccaaattttcctttgactggaaagtgttt 92
Query: 61 tccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcct 120
|||||||||||||||||| |||| |||||||||| | ||||||||||||| || |||||
Sbjct: 91 tccgttgaccaacttttcaaatgtcaaacaaacacaggaaagtttggaaaatgatttccc 32
Query: 121 ggaaagtgaattccgggaaa 140
||||||||||||||| ||||
Sbjct: 31 ggaaagtgaattccgagaaa 12
>53949_ptc-miRf12127-akr:pmrd
Length = 128
Score = 198 bits (100), Expect = 8e-52
Identities = 121/128 (94%)
Strand = Plus / Plus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 1 ggaaaacactttcctggaaaccaagccaaatttttctttgactgaaaagtgttttccgtt 60
Query: 67 gaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcctggaaag 126
|||||||||||||| ||||||| ||||| | |||||||||||||||||||||| ||||||
Sbjct: 61 gaccaacttttctagtggcaaataaacacaggaaagtttggaaagtggtttcccggaaag 120
Query: 127 tgaattcc 134
||||||||
Sbjct: 121 tgaattcc 128
>54212_ptc-miRf12390-akr:pmrd
Length = 141
Score = 190 bits (96), Expect = 2e-49
Identities = 126/136 (92%)
Strand = Plus / Plus
Query: 1 tttccaggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttt 60
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2 tttccatgaaaacactttcctggaaaccaagccaaattttcctttgattggaaagtgttt 61
Query: 61 tccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcct 120
||| |||||||||||| |||||| |||||||||| | |||| |||||||||||||||||
Sbjct: 62 tccattgaccaactttcctaatgtcaaacaaacacaggaaaatttggaaagtggtttcca 121
Query: 121 ggaaagtgaattccgg 136
||||||| ||||||||
Sbjct: 122 ggaaagtaaattccgg 137
>53446_ptc-miRf11624-akr:pmrd
Length = 137
Score = 188 bits (95), Expect = 7e-49
Identities = 125/135 (92%)
Strand = Plus / Minus
Query: 2 ttccaggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgtttt 61
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 137 ttccatgaaaacactttcctggaaaccaagccaaattttcctttgattggaaagtgtttt 78
Query: 62 ccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcctg 121
|| |||||||||||| |||||| |||||||||| | |||| ||||||||||||||||| |
Sbjct: 77 ccattgaccaactttcctaatgtcaaacaaacacaggaaaatttggaaagtggtttccag 18
Query: 122 gaaagtgaattccgg 136
|||||| ||||||||
Sbjct: 17 gaaagtaaattccgg 3
>53744_ptc-miRf11922-akr:pmrd
Length = 128
Score = 176 bits (89), Expect = 3e-45
Identities = 113/121 (93%)
Strand = Plus / Plus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||
Sbjct: 1 ggaaaacactttcctggaaaccaagccaaatttttctttgactggaaagtatttttcgtt 60
Query: 67 gaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcctggaaag 126
|| ||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||
Sbjct: 61 gatcaacttttctaatagcaaacaaacacaggaaagtttggaaagtggtttcccggaaag 120
Query: 127 t 127
|
Sbjct: 121 t 121
>51902_ptc-miRf10080-akr:pmrd
Length = 178
Score = 172 bits (87), Expect = 4e-44
Identities = 123/135 (91%)
Strand = Plus / Minus
Query: 6 aggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgt 65
||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 136 aggaaaacattttcctgaaaaccaagccaaatttttctttgactgaaaagtgttttccgt 77
Query: 66 tgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcctggaaa 125
|||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 76 tgaccaacttttttaatggcaaacaaacatgggaaagtttggaaagtggtttcccggaaa 17
Query: 126 gtgaattccgggaaa 140
|| ||||||||||
Sbjct: 16 gtagtttccgggaaa 2
>53899_ptc-miRf12077-akr:pmrd
Length = 126
Score = 159 bits (80), Expect = 7e-40
Identities = 104/112 (92%)
Strand = Plus / Plus
Query: 8 gaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttg 67
||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||||
Sbjct: 1 gaaaacactgtcctggaaacgaagccaaattttcctttgactagaaagtgtttttcgttg 60
Query: 68 accaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcc 119
|||||||||||||||| |||||||| | | ||||||||||||||||||||||
Sbjct: 61 accaacttttctaatgacaaacaaatacaggaaagtttggaaagtggtttcc 112
>52002_ptc-miRf10180-akr:pmrd
Length = 115
Score = 143 bits (72), Expect = 4e-35
Identities = 106/116 (91%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 13 cactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgaccaa 72
|||||||||||||||||| ||||||||| |||||||| |||||||||| | ||||||||
Sbjct: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
Query: 73 cttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcctggaaagtg 128
|||| ||||||||||||||||| | |||||||||||||||||||||| ||||||||
Sbjct: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagtg 115
>52852_ptc-miRf11030-akr:pmrd
Length = 114
Score = 135 bits (68), Expect = 1e-32
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 37 ttttcctttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaa 96
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4 ttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaca 63
Query: 97 agaaagtttggaaagtggtttcctggaaagtgaattccgg 136
||||||||| ||||||||||| |||||| |||||||||
Sbjct: 64 ggaaagtttgaaaagtggtttctcggaaagcgaattccgg 103
>51914_ptc-miRf10092-akr:pmrd
Length = 157
Score = 121 bits (61), Expect = 1e-28
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 37 ttttcctttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaa 96
|||||| |||| |||||||||||| | |||||||||||||||||||||||||||||| |
Sbjct: 56 ttttccgttgatcggaaagtgtttttcattgaccaacttttctaatggcaaacaaacaca 115
Query: 97 agaaagtttggaaagtggtttcctggaaa 125
||||||||||||||||||||||||||||
Sbjct: 116 ggaaagtttggaaagtggtttcctggaaa 144
>53893_ptc-miRf12071-akr:pmrd
Length = 99
Score = 115 bits (58), Expect = 9e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
||||| ||||||||||||| ||||||||||||| ||||||||||||||||| | ||||||
Sbjct: 2 ttgaccggaaagtgttttctgttgaccaactttcctaatggcaaacaaacacaggaaagt 61
Query: 104 ttggaaagtggtttcctggaaa 125
|||||||||||||||| |||||
Sbjct: 62 ttggaaagtggtttcccggaaa 83
>52983_ptc-miRf11161-akr:pmrd
Length = 114
Score = 115 bits (58), Expect = 9e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
||||| |||||||||||||||||||||| |||| ||||||||||||||||| | ||||||
Sbjct: 11 ttgaccggaaagtgttttccgttgaccacctttcctaatggcaaacaaacacaggaaagt 70
Query: 104 ttggaaagtggtttcctggaaa 125
|||||||||||||||| |||||
Sbjct: 71 ttggaaagtggtttccgggaaa 92
>53786_ptc-miRf11964-akr:pmrd
Length = 99
Score = 111 bits (56), Expect = 1e-25
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
||||| ||||||||||||| |||||||||||||||||||| |||||||||| | ||||||
Sbjct: 2 ttgaccggaaagtgttttctgttgaccaacttttctaatgacaaacaaacacaggaaagt 61
Query: 104 ttggaaagtggtttcc 119
||||||||||||||||
Sbjct: 62 ttggaaagtggtttcc 77
>53785_ptc-miRf11963-akr:pmrd
Length = 99
Score = 111 bits (56), Expect = 1e-25
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
||||| ||||||||||||| |||||||||||||||||||| |||||||||| | ||||||
Sbjct: 2 ttgaccggaaagtgttttctgttgaccaacttttctaatgacaaacaaacacaggaaagt 61
Query: 104 ttggaaagtggtttcc 119
||||||||||||||||
Sbjct: 62 ttggaaagtggtttcc 77
>52895_ptc-miRf11073-akr:pmrd
Length = 101
Score = 111 bits (56), Expect = 1e-25
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
||||| ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 3 ttgaccggaaagtgttttccgttgaccaattttcctaatggcaaacaaacacaagaaagt 62
Query: 104 ttggaaagtggtttcc 119
|| |||||||||||||
Sbjct: 63 ttagaaagtggtttcc 78
>52894_ptc-miRf11072-akr:pmrd
Length = 114
Score = 111 bits (56), Expect = 1e-25
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
||||| ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 11 ttgaccggaaagtgttttccgttgaccaattttcctaatggcaaacaaacacaagaaagt 70
Query: 104 ttggaaagtggtttcc 119
|| |||||||||||||
Sbjct: 71 ttagaaagtggtttcc 86
>53673_ptc-miRf11851-akr:pmrd
Length = 106
Score = 109 bits (55), Expect = 6e-25
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 43 tttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaag 102
|||||||||||||||||||||||||||||||||| ||||| |||||||||| | |||||
Sbjct: 102 tttgactggaaagtgttttccgttgaccaactttcctaataacaaacaaacacatgaaag 43
Query: 103 tttggaaagtggttt 117
|||||||||||||||
Sbjct: 42 tttggaaagtggttt 28
>53991_ptc-miRf12169-akr:pmrd
Length = 97
Score = 107 bits (54), Expect = 2e-24
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
|||||||||||||||||||||||||||| |||| |||||| |||||||| | | ||||||
Sbjct: 1 ttgactggaaagtgttttccgttgaccacctttcctaatgacaaacaaatacaggaaagt 60
Query: 104 ttggaaagtggtttcctggaaa 125
|||||||||||||||| |||||
Sbjct: 61 ttggaaagtggtttcccggaaa 82
>53742_ptc-miRf11920-akr:pmrd
Length = 114
Score = 107 bits (54), Expect = 2e-24
Identities = 69/74 (93%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
||||| ||||||||||||||||||||||||||| ||||||||||||||||| | ||||||
Sbjct: 11 ttgaccggaaagtgttttccgttgaccaactttcctaatggcaaacaaacacaggaaagt 70
Query: 104 ttggaaagtggttt 117
|| |||||||||||
Sbjct: 71 ttagaaagtggttt 84
>53331_ptc-miRf11509-akr:pmrd
Length = 107
Score = 105 bits (53), Expect = 9e-24
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 58 ttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaaagtggttt 117
|||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||||||
Sbjct: 31 tttttcgttgaccaacttttcttatggcaaacaaacacaggaaagtttggaaagtggttt 90
Query: 118 cctggaaagtgaattcc 134
|| | ||||||||||||
Sbjct: 91 cccgaaaagtgaattcc 107
>53301_ptc-miRf11479-akr:pmrd
Length = 113
Score = 103 bits (52), Expect = 3e-23
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 50 ggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaa 109
||||||||||||||||||||||||||| || ||||||||||||| | ||||||||||||
Sbjct: 24 ggaaagtgttttccgttgaccaactttcctcgtggcaaacaaacacaggaaagtttggaa 83
Query: 110 agtggtttcctggaaa 125
|||||||||| |||||
Sbjct: 84 agtggtttcccggaaa 99
>52530_ptc-miRf10708-akr:pmrd
Length = 117
Score = 103 bits (52), Expect = 3e-23
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 50 ggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagtttggaa 109
||||||||||||||||||||||||||| || ||||||||||||| | ||||||||||||
Sbjct: 92 ggaaagtgttttccgttgaccaactttcctcgtggcaaacaaacacaggaaagtttggaa 33
Query: 110 agtggtttcctggaaa 125
|||||||||| |||||
Sbjct: 32 agtggtttcccggaaa 17
>52140_ptc-miRf10318-akr:pmrd
Length = 144
Score = 103 bits (52), Expect = 3e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
|||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 52 ggaaaacattttcctggaaaccaaaccaaatttttctttgactggaaagtgttttccgtt 111
Query: 67 gacc 70
||||
Sbjct: 112 gacc 115
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 37 ttttcctttgactggaaagtgttttccgttgaccaacttt 76
|||||| ||||| |||||||||||||||||||||||||||
Sbjct: 103 ttttccgttgaccggaaagtgttttccgttgaccaacttt 142
>52896_ptc-miRf11074-akr:pmrd
Length = 106
Score = 99.6 bits (50), Expect = 5e-22
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 42 ctttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaa 101
||||||||||||| ||||||| |||||||||||||||||||| ||||||||| | ||||
Sbjct: 103 ctttgactggaaaatgttttctgttgaccaacttttctaatgacaaacaaacgcatgaaa 44
Query: 102 gtttggaaagtggtttcc 119
|||| |||||||||||||
Sbjct: 43 gtttagaaagtggtttcc 26
>53306_ptc-miRf11484-akr:pmrd
Length = 96
Score = 97.6 bits (49), Expect = 2e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
||||||||||||||||||||||||||||||||| |||| ||||| |||||| | ||||||
Sbjct: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
Query: 104 ttggaaagtggtt 116
|||||| ||||||
Sbjct: 61 ttggaaggtggtt 73
>51880_ptc-miRf10058-akr:pmrd
Length = 151
Score = 97.6 bits (49), Expect = 2e-21
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 6 aggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgt 65
|||||||||||||||| |||| ||| ||||||||| ||||||||||||||||||||||||
Sbjct: 45 aggaaaacactttcctagaaatcaaaccaaatttttctttgactggaaagtgttttccgt 104
Query: 66 tgacc 70
|||||
Sbjct: 105 tgacc 109
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 38 tttcctttgactggaaagtgttttccgttgacca 71
||||| ||||| ||||||||||||||||||||||
Sbjct: 118 tttccgttgaccggaaagtgttttccgttgacca 151
>54077_ptc-miRf12255-akr:pmrd
Length = 143
Score = 95.6 bits (48), Expect = 8e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
|||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 52 ggaaaacactttcctggaaaccaaaccaaaattttttttgactggaaagtgttttccgtt 111
Query: 67 gacc 70
||||
Sbjct: 112 gacc 115
Score = 52.0 bits (26), Expect = 1e-07
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 37 ttttcctttgactggaaagtgttttccgttgaccaacttttc 78
|||||| ||||| ||||||||||| |||||||||||||||||
Sbjct: 103 ttttccgttgaccggaaagtgttt-ccgttgaccaacttttc 143
>54076_ptc-miRf12254-akr:pmrd
Length = 151
Score = 95.6 bits (48), Expect = 8e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
|||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 56 ggaaaacactttcctggaaaccaaaccaaaattttttttgactggaaagtgttttccgtt 115
Query: 67 gacc 70
||||
Sbjct: 116 gacc 119
Score = 60.0 bits (30), Expect = 5e-10
Identities = 43/46 (93%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 37 ttttcctttgactggaaagtgttttccgttgaccaacttttctaat 82
|||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 107 ttttccgttgaccggaaagtgttt-ccgttgaccaacttttctaat 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 102 gtttggaaagtggtttcctggaaa 125
|||||||||||||||||| |||||
Sbjct: 1 gtttggaaagtggtttcccggaaa 24
>52319_ptc-miRf10497-akr:pmrd
Length = 138
Score = 95.6 bits (48), Expect = 8e-21
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
|||||||| ||| ||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 90 ggaaaacatttttctggaaaccaaaccaaatttttctttgactggaaagtgttttccgtt 31
Query: 67 gacc 70
||||
Sbjct: 30 gacc 27
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 37 ttttcctttgactggaaagtgttttccgttgaccaactt 75
|||||| ||||| ||||||||||||||||||||||||||
Sbjct: 39 ttttccgttgaccggaaagtgttttccgttgaccaactt 1
>51908_ptc-miRf10086-akr:pmrd
Length = 164
Score = 95.6 bits (48), Expect = 8e-21
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
|||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 52 ggaaaacattttcctggaaaccaaaccaaatttttttttgactggaaagtgttttccgtt 111
Query: 67 gacc 70
||||
Sbjct: 112 gacc 115
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttt 76
|||||||||||||||||||||||||||||||||
Sbjct: 130 ttgactggaaagtgttttccgttgaccaacttt 162
>52395_ptc-miRf10573-akr:pmrd
Length = 166
Score = 91.7 bits (46), Expect = 1e-19
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcc-tttgactggaaagtgttttccgt 65
|||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 52 ggaaaacactttcctgaaaaccaagtcaaattttccttttgactggaaagtgttttccgt 111
Query: 66 tgacca 71
| ||||
Sbjct: 112 taacca 117
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 37 ttttcctttgactggaaagtgttttccgttgaccaacttt 76
|||| ||||||| |||||||||||||||||||||| ||||
Sbjct: 125 tttttctttgaccggaaagtgttttccgttgaccaccttt 164
>52890_ptc-miRf11068-akr:pmrd
Length = 92
Score = 89.7 bits (45), Expect = 5e-19
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||
Sbjct: 9 ggaaaacactttcctggaacccaagccaaattttcctttaactggaaagtattttttgtt 68
Query: 67 gacca 71
|||||
Sbjct: 69 gacca 73
>53153_ptc-miRf11331-akr:pmrd
Length = 143
Score = 87.7 bits (44), Expect = 2e-18
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
|||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||| |||
Sbjct: 92 ggaaaatattttcctggaaaccaaaccaaatttttctttgactggaaagtgttttctgtt 33
Query: 67 gacc 70
||||
Sbjct: 32 gacc 29
>51961_ptc-miRf10139-akr:pmrd
Length = 144
Score = 87.7 bits (44), Expect = 2e-18
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
||||||||||||||||||| | || ||||||| | |||||||||||||||||||||||||
Sbjct: 52 ggaaaacactttcctggaatctaaaccaaattgttctttgactggaaagtgttttccgtt 111
Query: 67 gacc 70
||||
Sbjct: 112 gacc 115
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 37 ttttcctttgactggaaagtgttttccgttgaccaacttt 76
|||||| ||||| |||||||||||||||||||||||||||
Sbjct: 103 ttttccgttgaccggaaagtgttttccgttgaccaacttt 142
>51859_ptc-miRf10037-akr:pmrd
Length = 133
Score = 79.8 bits (40), Expect = 5e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 7 ggaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgtt 66
||||||||||||||| |||| |||| |||||||| ||||||||| |||||||||| ||||
Sbjct: 47 ggaaaacactttccttgaaatcaagtcaaatttttctttgactgaaaagtgtttttcgtt 106
Query: 67 gacc 70
||||
Sbjct: 107 gacc 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttga 68
||||| |||||||||||||||||||
Sbjct: 105 ttgaccggaaagtgttttccgttga 129
>53122_ptc-miRf11300-akr:pmrd
Length = 144
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 16 tttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgacc 70
||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||
Sbjct: 61 tttcctggaaaccaaaccaaatttttctttgactgaaaagtgtttttcgttgacc 115
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttt 76
||||| |||||||||||||||||||||||||||
Sbjct: 110 ttgaccggaaagtgttttccgttgaccaacttt 142
>52524_ptc-miRf10702-akr:pmrd
Length = 131
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 16 tttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgacc 70
||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||
Sbjct: 55 tttcctggaaaccaaaccaaatttttctttgactgaaaagtgtttttcgttgacc 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgacca 71
||||| ||||||||||||||||||||||
Sbjct: 104 ttgaccggaaagtgttttccgttgacca 131
>52523_ptc-miRf10701-akr:pmrd
Length = 144
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 16 tttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgacc 70
||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||
Sbjct: 61 tttcctggaaaccaaaccaaatttttctttgactgaaaagtgtttttcgttgacc 115
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttt 76
||||| |||||||||||||||||||||||||||
Sbjct: 110 ttgaccggaaagtgttttccgttgaccaacttt 142
>52110_ptc-miRf10288-akr:pmrd
Length = 131
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 16 tttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgacc 70
|||||| |||||||| ||||||||| |||||||||||||||||||| ||||||||
Sbjct: 55 tttcctagaaaccaaaccaaatttttctttgactggaaagtgtttttcgttgacc 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgacca 71
||||| ||||||||||||||||||||||
Sbjct: 104 ttgaccggaaagtgttttccgttgacca 131
>52053_ptc-miRf10231-akr:pmrd
Length = 144
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 16 tttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgacc 70
||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||
Sbjct: 61 tttcctggaaaccaaaccaaatttttctttgactgaaaagtgtttttcgttgacc 115
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttt 76
||||| |||||||||||||||||||||||||||
Sbjct: 110 ttgaccggaaagtgttttccgttgaccaacttt 142
>52052_ptc-miRf10230-akr:pmrd
Length = 131
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 16 tttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgacc 70
||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||
Sbjct: 55 tttcctggaaaccaaaccaaatttttctttgactgaaaagtgtttttcgttgacc 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgacca 71
||||| ||||||||||||||||||||||
Sbjct: 104 ttgaccggaaagtgttttccgttgacca 131
>53759_ptc-miRf11937-akr:pmrd
Length = 149
Score = 69.9 bits (35), Expect = 5e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 8 gaaaacactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttg 67
||||||||||||||| ||||||| ||||||||| ||| | |||||||||||||| ||||
Sbjct: 55 gaaaacactttcctgaaaaccaaaccaaatttttttttaattggaaagtgttttctgttg 114
Query: 68 acc 70
|||
Sbjct: 115 acc 117
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgaccaacttttctaa 81
||||| ||||||||||||||||||||||||||||||||
Sbjct: 112 ttgaccggaaagtgttttccgttgaccaacttttctaa 149
>52909_ptc-miRf11087-akr:pmrd
Length = 115
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 34 aaattttcctttgactggaaagtgttttccgttga 68
||||||| |||||||||||||||||||||||||||
Sbjct: 2 aaatttttctttgactggaaagtgttttccgttga 36
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 34 aaattttcctttgactggaaagtgttttc 62
||||||| |||||||||||||||||||||
Sbjct: 114 aaatttttctttgactggaaagtgttttc 86
>52487_ptc-miRf10665-akr:pmrd
Length = 152
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 38 tttcctttgactggaaagtgttttccgttgaccaacttt 76
||||| ||||| |||||||||||||||||||||||||||
Sbjct: 113 tttccgttgaccggaaagtgttttccgttgaccaacttt 151
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 6 aggaaaacactttcctggaaaccaagccaaatt 38
||||||||||||||||| ||||||| |||||||
Sbjct: 50 aggaaaacactttcctgaaaaccaaaccaaatt 82
>52935_ptc-miRf11113-akr:pmrd
Length = 78
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 6 aggaaaacactttcctggaaaccaagccaaattt 39
||||||||||||||||||||| ||||||||||||
Sbjct: 34 aggaaaacactttcctggaaatcaagccaaattt 1
>52458_ptc-miRf10636-akr:pmrd
Length = 138
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 44 ttgactggaaagtgttttccgttgaccaacttt 76
||||| |||||||||||||||||||||||||||
Sbjct: 33 ttgaccggaaagtgttttccgttgaccaacttt 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 38 tttcctttgactggaaagtgttttccgttgacc 70
||||| |||||| ||||||||||| ||||||||
Sbjct: 60 tttccgttgactagaaagtgtttttcgttgacc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 50 ggaaagtgttttccgttgac 69
||||||||||||||||||||
Sbjct: 89 ggaaagtgttttccgttgac 70
>52085_ptc-miRf10263-akr:pmrd
Length = 161
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 38 tttcctttgactggaaagtgttttccgttgacc 70
||||| |||||||||||||||||||||||||||
Sbjct: 87 tttccgttgactggaaagtgttttccgttgacc 119
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 38 tttcctttgactggaaagtgttttccgttgacca 71
||||| ||||| ||||||||||||||||||||||
Sbjct: 128 tttccgttgaccggaaagtgttttccgttgacca 161
>54023_ptc-miRf12201-akr:pmrd
Length = 66
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 38 tttcctttgactggaaagtgttttccgttga 68
||||| |||||||||||||||||||||||||
Sbjct: 36 tttccgttgactggaaagtgttttccgttga 66
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgacc 70
|||||||||||| ||||||||||||||
Sbjct: 1 ttgactggaaagcgttttccgttgacc 27
>53267_ptc-miRf11445-akr:pmrd
Length = 75
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 38 tttcctttgactggaaagtgttttccgttgacc 70
||||| ||||||||||| |||||||||||||||
Sbjct: 40 tttccgttgactggaaaatgttttccgttgacc 72
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgacc 70
||||||||||| |||||||||||||||
Sbjct: 5 ttgactggaaaatgttttccgttgacc 31
>51924_ptc-miRf10102-akr:pmrd
Length = 120
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 38 tttcctttgactggaaagtgttttccgttgacc 70
||||| ||||| |||||||||||||||||||||
Sbjct: 87 tttccgttgaccggaaagtgttttccgttgacc 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 9 aaaacactttcctggaaaccaagccaaatt 38
|||||||||||||| ||||||| |||||||
Sbjct: 48 aaaacactttcctgaaaaccaaaccaaatt 77
>53581_ptc-miRf11759-akr:pmrd
Length = 75
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 44 ttgactggaaagtgttttccgttgacc 70
||||||||||| |||||||||||||||
Sbjct: 5 ttgactggaaaatgttttccgttgacc 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 38 tttcctttgactggaaagtgttttccgttgacc 70
||||| ||||||||||| |||||| ||||||||
Sbjct: 40 tttccgttgactggaaaatgtttttcgttgacc 72
