miRNEST 2.0, an integrative microRNA resource :: BLAST
>41408_ptc-MIR319e:mirbase
Length = 192
Score = 381 bits (192), Expect = e-106
Identities = 192/192 (100%)
Strand = Plus / Plus
Query: 1 ggaggggctgaggtgctccttttagtccaatacggagggctgagaagcggctagagctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaggggctgaggtgctccttttagtccaatacggagggctgagaagcggctagagctgc 60
Query: 61 catctcatgcatttaggcaatgcttaacatttgacgaagagaggttaagcttggccactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catctcatgcatttaggcaatgcttaacatttgacgaagagaggttaagcttggccactt 120
Query: 121 gcatggtgtgggagcaactccttccgcatgctttgctcgcccattggactgaagggagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcatggtgtgggagcaactccttccgcatgctttgctcgcccattggactgaagggagct 180
Query: 181 cctggttttacc 192
||||||||||||
Sbjct: 181 cctggttttacc 192
>41411_ptc-MIR319h:mirbase
Length = 195
Score = 289 bits (146), Expect = 4e-79
Identities = 180/190 (94%), Gaps = 1/190 (0%)
Strand = Plus / Plus
Query: 3 aggggctgaggtgctccttttagtccaatacggagggctgagaagcggctagagctgcca 62
||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 aggggctaaagtgctccttttagtccaataaggagggctgagaagcggctagagctgcca 64
Query: 63 tctcatgcatttaggcaatgcttaacatttgacgaagagaggttaagcttggccacttgc 122
||||||||||||||||||||||||||||||| | ||||| | ||||||||||||| |||
Sbjct: 65 tctcatgcatttaggcaatgcttaacatttggcaaagag-gtttaagcttggccaggtgc 123
Query: 123 atggtgtgggagcaactccttccgcatgctttgctcgcccattggactgaagggagctcc 182
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 124 atggtgtgggagcaactccttccgcatgctttgttcgcccattggactgaagggagctcc 183
Query: 183 tggttttacc 192
||||||||||
Sbjct: 184 tggttttacc 193
>40370_rco-MIR319d:mirbase
Length = 187
Score = 79.8 bits (40), Expect = 7e-16
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 15 gctccttttagtccaatacggagggctgagaagcggcta-gagctgccatctcatgcatt 73
|||||||| ||||||||| |||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 9 gctcctttcagtccaatatggagggcttagaagcggcaaagagctgccatctcatgcatt 68
Query: 74 taggcaat 81
|||||||
Sbjct: 69 aaggcaat 76
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 73.8 bits (37), Expect = 4e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 15 gctccttttagtccaatacggagggctgagaagcggctagagctgccatctcatgca 71
|||||||||||||||||| |||||||||| ||||| |||||||||||||||||||
Sbjct: 14 gctccttttagtccaataaagagggctgaggggcggccagagctgccatctcatgca 70
Score = 60.0 bits (30), Expect = 6e-10
Identities = 49/54 (90%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 129 tgggagcaactccttccgcatgctttgctcgcccattggactgaagggagctcc 182
|||||||||||||| ||||| ||||||| | | |||||||||||||||||||||
Sbjct: 158 tgggagcaactcct-ccgcacgctttgcccactcattggactgaagggagctcc 210
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 cattggactgaagggagctcc 182
|||||||||||||||||||||
Sbjct: 155 cattggactgaagggagctcc 175
>41637_vvi-MIR319e:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 ttggactgaagggagctcct 183
||||||||||||||||||||
Sbjct: 77 ttggactgaagggagctcct 96
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 ttggactgaagggagctcct 183
||||||||||||||||||||
Sbjct: 176 ttggactgaagggagctcct 195
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 ttggactgaagggagctcct 183
||||||||||||||||||||
Sbjct: 174 ttggactgaagggagctcct 193
>41236_csi-MIR319:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 ttggactgaagggagctcct 183
||||||||||||||||||||
Sbjct: 91 ttggactgaagggagctcct 110
>41129_tcc-MIR319:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 ttggactgaagggagctcct 183
||||||||||||||||||||
Sbjct: 94 ttggactgaagggagctcct 113
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 ttggactgaagggagctcct 183
||||||||||||||||||||
Sbjct: 410 ttggactgaagggagctcct 429
>40071_ath-MIR319c:mirbase
Length = 199
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 ttggactgaagggagctcct 183
||||||||||||||||||||
Sbjct: 170 ttggactgaagggagctcct 189
>40069_ath-MIR319a:mirbase
Length = 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 163 attggactgaagggagctcc 182
||||||||||||||||||||
Sbjct: 153 attggactgaagggagctcc 172
>39861_aly-MIR319d:mirbase
Length = 267
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 ttggactgaagggagctcct 183
||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctcct 223
>39860_aly-MIR319c:mirbase
Length = 271
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 ttggactgaagggagctcct 183
||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctcct 223
>39858_aly-MIR319a:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 163 attggactgaagggagctcc 182
||||||||||||||||||||
Sbjct: 176 attggactgaagggagctcc 195
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 164 ttggactgaagggagctcct 183
||||||||||||||||||||
Sbjct: 141 ttggactgaagggagctcct 160
