miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52409_ptc-miRf10587-akr:pmrd
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatatagattttggttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatatagattttggttct 60
Query: 61 ggttaaaggagatcgccatatgggatctcaggatagcc 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggttaaaggagatcgccatatgggatctcaggatagcc 98
>52358_ptc-miRf10536-akr:pmrd
Length = 103
Score = 101 bits (51), Expect = 9e-23
Identities = 83/93 (89%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga---ttttggt 57
|||||||||||||| || |||||||||||||||| |||||| ||||||| |||||||
Sbjct: 2 ggttaaaggggatcgccaaatgggatctcaagttagcccaaccatatagaggattttggt 61
Query: 58 tctggttaaaggagatcgccatatgggatctca 90
|||||||||||| |||||||| |||||||||||
Sbjct: 62 tctggttaaaggggatcgccagatgggatctca 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 60 tggttaaaggagatcgccatatgggatctca 90
|||||||||| |||||||| |||||||||||
Sbjct: 1 tggttaaaggggatcgccaaatgggatctca 31
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagtta 35
|||||||||||||| || |||||||||||| ||||
Sbjct: 65 ggttaaaggggatcgccagatgggatctcatgtta 99
>54254_ptc-miRf12432-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacaagattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>54245_ptc-miRf12423-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacaagattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>53941_ptc-miRf12119-akr:pmrd
Length = 165
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 65 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacaagattttggt 124
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 125 tctggttaaaggggatcgccagatgggatctcaggttagcc 165
Score = 87.7 bits (44), Expect = 1e-18
Identities = 89/102 (87%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaac--tatataga--ttttgg 56
|||||||||||||| || |||||||||||| |||| |||||| | ||||| ||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacatagattttttgg 60
Query: 57 ttctggttaaaggagatcgccatatgggatctcaggatagcc 98
||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 ttctggttaaaggggatcgccagatgggatctcaggttagcc 102
>53940_ptc-miRf12118-akr:pmrd
Length = 110
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 6 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacaagattttggt 65
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 66 tctggttaaaggggatcgccagatgggatctcaggttagcc 106
Score = 61.9 bits (31), Expect = 8e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 56 gttctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 gttctggttaaaggggatcgccagatgggatctcaggttagcc 43
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaac 42
|||||||||||||| || |||||||||||| |||| ||||||
Sbjct: 69 ggttaaaggggatcgccagatgggatctcaggttagcccaac 110
>53542_ptc-miRf11720-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacaggattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>53541_ptc-miRf11719-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacaggattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>53466_ptc-miRf11644-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| ||| | ||| |||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccatacacaggatattggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>53465_ptc-miRf11643-akr:pmrd
Length = 114
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| ||| | ||| |||||
Sbjct: 8 ggttaaaggggatcgccagatgggatctcaggttagcccaaccatacacaggatattggt 67
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 68 tctggttaaaggggatcgccagatgggatctcaggttagcc 108
Score = 65.9 bits (33), Expect = 5e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 54 tggttctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 tggttctggttaaaggggatcgccagatgggatctcaggttagcc 45
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaac 42
|||||||||||||| || |||||||||||| |||| ||||||
Sbjct: 71 ggttaaaggggatcgccagatgggatctcaggttagcccaac 112
>53429_ptc-miRf11607-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacaagattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>52438_ptc-miRf10616-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacaggattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>52231_ptc-miRf10409-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacataggattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>52224_ptc-miRf10402-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacaggattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>52032_ptc-miRf10210-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 2e-20
Identities = 88/101 (87%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacaggattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>54201_ptc-miRf12379-akr:pmrd
Length = 98
Score = 91.7 bits (46), Expect = 9e-20
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatatagattttggttct 60
|||||||||||||| ||||| ||||||||| |||| |||||| | |||||||||||||
Sbjct: 1 ggttaaaggggatcgccggacgggatctcaggttagcccaaccacgcagattttggttct 60
Query: 61 ggttaaaggagatcgccatatgggatctcaggatagcc 98
||||||||| ||||||| | ||||||||||| |||||
Sbjct: 61 ggttaaaggggatcgccggacgggatctcaggttagcc 98
>53471_ptc-miRf11649-akr:pmrd
Length = 102
Score = 89.7 bits (45), Expect = 3e-19
Identities = 88/102 (86%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga----ttttgg 56
|||||||||||||| || |||||||||||| |||| |||||| ||| | | ||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccatacacagattttttgg 60
Query: 57 ttctggttaaaggagatcgccatatgggatctcaggatagcc 98
||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 ttctggttaaaggggatcgccagatgggatctcaggttagcc 102
>53470_ptc-miRf11648-akr:pmrd
Length = 102
Score = 89.7 bits (45), Expect = 3e-19
Identities = 88/102 (86%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga----ttttgg 56
|||||||||||||| || |||||||||||| |||| |||||| ||| | | ||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccatacacagattttttgg 60
Query: 57 ttctggttaaaggagatcgccatatgggatctcaggatagcc 98
||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 ttctggttaaaggggatcgccagatgggatctcaggttagcc 102
>52551_ptc-miRf10729-akr:pmrd
Length = 100
Score = 89.7 bits (45), Expect = 3e-19
Identities = 87/100 (87%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata--gattttggtt 58
|||||||||||||| || |||||||||||| |||| |||||| | | | || |||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacagaatttggtt 60
Query: 59 ctggttaaaggagatcgccatatgggatctcaggatagcc 98
||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 ctggttaaaggggatcgccagatgggatctcaggttagcc 100
>53568_ptc-miRf11746-akr:pmrd
Length = 102
Score = 87.7 bits (44), Expect = 1e-18
Identities = 89/102 (87%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaac--tatataga--ttttgg 56
|||||||||||||| || |||||||||||| |||| |||||| | ||||| ||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacatagattttttgg 60
Query: 57 ttctggttaaaggagatcgccatatgggatctcaggatagcc 98
||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 ttctggttaaaggggatcgccagatgggatctcaggttagcc 102
>53567_ptc-miRf11745-akr:pmrd
Length = 102
Score = 87.7 bits (44), Expect = 1e-18
Identities = 89/102 (87%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaac--tatataga--ttttgg 56
|||||||||||||| || |||||||||||| |||| |||||| | ||||| ||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacatagattttttgg 60
Query: 57 ttctggttaaaggagatcgccatatgggatctcaggatagcc 98
||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 ttctggttaaaggggatcgccagatgggatctcaggttagcc 102
>53427_ptc-miRf11605-akr:pmrd
Length = 101
Score = 85.7 bits (43), Expect = 5e-18
Identities = 87/101 (86%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga---ttttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | | |||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacagaattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>53426_ptc-miRf11604-akr:pmrd
Length = 110
Score = 85.7 bits (43), Expect = 5e-18
Identities = 87/101 (86%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga---ttttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | | |||||||
Sbjct: 6 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacagaattttggt 65
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 66 tctggttaaaggggatcgccagatgggatctcaggttagcc 106
Score = 61.9 bits (31), Expect = 8e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 56 gttctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 1 gttctggttaaaggggatcgccagatgggatctcaggttagcc 43
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaac 42
|||||||||||||| || |||||||||||| |||| ||||||
Sbjct: 69 ggttaaaggggatcgccagatgggatctcaggttagcccaac 110
>53315_ptc-miRf11493-akr:pmrd
Length = 101
Score = 85.7 bits (43), Expect = 5e-18
Identities = 87/101 (86%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggattgccagatgggatctcaggttagcccaaccacacacaggattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>53308_ptc-miRf11486-akr:pmrd
Length = 101
Score = 85.7 bits (43), Expect = 5e-18
Identities = 87/101 (86%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata---gattttggt 57
||||||||||||| || |||||||||||| |||| |||||| | | | |||||||||
Sbjct: 1 ggttaaaggggattgccagatgggatctcaggttagcccaaccacacacaggattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>52171_ptc-miRf10349-akr:pmrd
Length = 101
Score = 85.7 bits (43), Expect = 5e-18
Identities = 87/101 (86%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga---ttttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | | |||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacagaattttggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>54255_ptc-miRf12433-akr:pmrd
Length = 102
Score = 81.8 bits (41), Expect = 8e-17
Identities = 87/102 (85%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga----ttttgg 56
|||||||||||||| || |||||||||||| |||| |||||| | | | | ||||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacagattttttgg 60
Query: 57 ttctggttaaaggagatcgccatatgggatctcaggatagcc 98
||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 ttctggttaaaggggatcgccagatgggatctcaggttagcc 102
>53428_ptc-miRf11606-akr:pmrd
Length = 102
Score = 81.8 bits (41), Expect = 8e-17
Identities = 87/102 (85%), Gaps = 4/102 (3%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga----ttttgg 56
|||||||||||||| | ||||||||||||||||| |||||| ||| | | ||||||
Sbjct: 1 ggttaaaggggatcgtcagatgggatctcaagttagcccaaccatacacagattttttgg 60
Query: 57 ttctggttaaaggagatcgccatatgggatctcaggatagcc 98
||||||||||||| |||||||| ||| ||||||||| |||||
Sbjct: 61 ttctggttaaaggggatcgccagatgagatctcaggttagcc 102
>54274_ptc-miRf12452-akr:pmrd
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 85/99 (85%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata-gattttggttc 59
|||||||||||||| ||||| ||||||||| |||| |||||| | | | ||| |||||||
Sbjct: 1 ggttaaaggggatcgccggacgggatctcaggttagcccaaccacacaggatattggttc 60
Query: 60 tggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||| ||||||| | ||||||||||| |||||
Sbjct: 61 tggttaaaggggatcgccggacgggatctcaggttagcc 99
>54202_ptc-miRf12380-akr:pmrd
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 85/99 (85%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata-gattttggttc 59
|||||||||||||| ||||| ||||||||| |||| |||||| | | | ||| |||||||
Sbjct: 1 ggttaaaggggatcgccggacgggatctcaggttagcccaaccacacaggatattggttc 60
Query: 60 tggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||| ||||||| | ||||||||||| |||||
Sbjct: 61 tggttaaaggggatcgccggacgggatctcaggttagcc 99
>53589_ptc-miRf11767-akr:pmrd
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 85/99 (85%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatata-gattttggttc 59
|||||||||||||| ||||| ||||||||| |||| |||||| | | | ||| |||||||
Sbjct: 1 ggttaaaggggatcgccggacgggatctcaggttagcccaaccacacaggatattggttc 60
Query: 60 tggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||| ||||||| | ||||||||||| |||||
Sbjct: 61 tggttaaaggggatcgccggacgggatctcaggttagcc 99
>53543_ptc-miRf11721-akr:pmrd
Length = 101
Score = 73.8 bits (37), Expect = 2e-14
Identities = 81/95 (85%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga---ttttggt 57
|||||||||||||| || |||||||||||| ||||||||||| | | | | | ||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttaacccaaccacacacaaaataatggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcagg 92
|||||||||||| |||||||| |||||||||||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcagg 95
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacc 38
|||||||||||||| || |||||||||||| |||||||
Sbjct: 64 ggttaaaggggatcgccagatgggatctcaggttaacc 101
>54256_ptc-miRf12434-akr:pmrd
Length = 101
Score = 69.9 bits (35), Expect = 3e-13
Identities = 85/101 (84%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga---ttttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | | | ||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacagaataatggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>54173_ptc-miRf12351-akr:pmrd
Length = 99
Score = 69.9 bits (35), Expect = 3e-13
Identities = 84/99 (84%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatatag-attttggttc 59
|||||||| ||||| ||||| ||||||||| |||| |||||| | | || || |||||||
Sbjct: 1 ggttaaagaggatcgccggacgggatctcaggttagcccaaccacacaggatattggttc 60
Query: 60 tggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||| ||||||| | ||||||||||| |||||
Sbjct: 61 tggttaaaggggatcgccggacgggatctcaggttagcc 99
>53472_ptc-miRf11650-akr:pmrd
Length = 101
Score = 69.9 bits (35), Expect = 3e-13
Identities = 85/101 (84%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga---ttttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | | | | | ||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacacacagaataatggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagatgggatctcaggttagcc 101
>53430_ptc-miRf11608-akr:pmrd
Length = 101
Score = 69.9 bits (35), Expect = 3e-13
Identities = 85/101 (84%), Gaps = 3/101 (2%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctcaagttaacccaactatataga---ttttggt 57
|||||||||||||| || |||||||||||| |||| |||||| | ||| | | ||||
Sbjct: 1 ggttaaaggggatcgccagatgggatctcaggttagcccaaccacatataaaataatggt 60
Query: 58 tctggttaaaggagatcgccatatgggatctcaggatagcc 98
|||||||||||| |||||||| | ||||||||||| |||||
Sbjct: 61 tctggttaaaggggatcgccagaagggatctcaggttagcc 101
>52384_ptc-miRf10562-akr:pmrd
Length = 95
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 60 tggttaaaggagatcgccatatgggatctca 90
||||||||||||||||||||| |||||||||
Sbjct: 57 tggttaaaggagatcgccataagggatctca 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 61 ggttaaaggagatcgccatatgggatctcag 91
||||||||| |||| ||||||||||||||||
Sbjct: 1 ggttaaaggggatcaccatatgggatctcag 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 ggttaaaggggatcaccggatgggatctca 30
||||||||||||||||| |||||||||||
Sbjct: 1 ggttaaaggggatcaccatatgggatctca 30
>53376_ptc-miRf11554-akr:pmrd
Length = 145
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 51 ttttggttctggttaaaggagatcgccatatgggatctca 90
|||||||| |||||||||||| |||||| | |||||||||
Sbjct: 56 ttttggttttggttaaaggaggtcgccagaagggatctca 95
>52661_ptc-miRf10839-akr:pmrd
Length = 138
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 51 ttttggttctggttaaaggagatcgccatatgggatctca 90
|||||||||| |||||| ||| |||||| |||||||||||
Sbjct: 92 ttttggttctagttaaatgaggtcgccagatgggatctca 131
>53157_ptc-miRf11335-akr:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 51 ttttggttctggttaaaggagatcgccatatgggatctcagg 92
|||||||| |||||||||||| |||| | | |||||||||||
Sbjct: 126 ttttggttttggttaaaggaggtcgctagaagggatctcagg 167
>52870_ptc-miRf11048-akr:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 gatgggatctcaagttaacccaac 42
|||||||||||| |||||||||||
Sbjct: 79 gatgggatctcaggttaacccaac 102
