miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52006_ptc-miRf10184-akr:pmrd
Length = 97
Score = 52.0 bits (26), Expect = 8e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 47 aaaaaatcagcttgggatttggcccagcaaaacccggtcgac 88
||||| ||||| |||||||||||| ||||||||||||||||
Sbjct: 50 aaaaactcagccagggatttggcccggcaaaacccggtcgac 91
>52238_ptc-miRf10416-akr:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 20 cggggctggaaccaggtcgggtttaagaaaaaatcagcttgggatttggcccagcaaaac 79
||||||||||||| |||||||| | ||||||| | | ||||||||| || | |||||
Sbjct: 35 cggggctggaaccgagtcgggttgatgaaaaaaccggtcagggatttggtccggtaaaac 94
Query: 80 ccggtcga 87
||||||||
Sbjct: 95 ccggtcga 102
>52020_ptc-miRf10198-akr:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 37 cgggtttaagaaaaaatcagcttgggatttggcccagcaaaacccggtcgac 88
||||| |||| ||||| | || ||||| ||||| |||| |||||||||||||
Sbjct: 45 cgggtctaagcaaaaacccgcctgggagttggctcagcgaaacccggtcgac 96
