miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52427_ptc-miRf10605-akr:pmrd
Length = 116
Score = 208 bits (105), Expect = 9e-55
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 71
Query: 61 tgtggggttgggcgtggacgcgtctaggtacaacatggggttggt 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tgtggggttgggcgtggacgcgtctaggtacaacatggggttggt 116
Score = 73.8 bits (37), Expect = 4e-14
Identities = 85/101 (84%)
Strand = Plus / Plus
Query: 60 atgtggggttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtcta 119
||||||||||||||||||||||||| |||| ||| ||||||||| | | ||||| ||
Sbjct: 5 atgtggggttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgttta 64
Query: 120 gacccaacatggggttgggcgtggacgtgtccaggtccaac 160
|||| || |||||||||||||||||| ||| |||| ||||
Sbjct: 65 gacctaatgtggggttgggcgtggacgcgtctaggtacaac 105
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 96 tggggttggtcggggacgcgtctagacccaacatggggttgg 137
||||||||| || |||||||||||| ||||||||||||||
Sbjct: 74 tggggttgggcgtggacgcgtctaggtacaacatggggttgg 115
>52428_ptc-miRf10606-akr:pmrd
Length = 94
Score = 186 bits (94), Expect = 3e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
Query: 61 tgtggggttgggcgtggacgcgtctaggtacaac 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtggggttgggcgtggacgcgtctaggtacaac 94
Score = 60.0 bits (30), Expect = 5e-10
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 67 gttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaa 126
|||||||||||||||||| |||| ||| ||||||||| | | ||||| |||||| ||
Sbjct: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
Query: 127 catggggttgggcgtggacgtgtccaggtccaac 160
|||||||||||||||||| ||| |||| ||||
Sbjct: 61 tgtggggttgggcgtggacgcgtctaggtacaac 94
>52751_ptc-miRf10929-akr:pmrd
Length = 119
Score = 99.6 bits (50), Expect = 6e-22
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 59 aatgtggggttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtct 118
||||||||||||||||| || |||||||||| |||||||| | ||| | | |||||||
Sbjct: 98 aatgtggggttgggcgtagaggcgtctaggtccaacatggtggtggacacagtcgcgtct 39
Query: 119 agacccaacatggggttgggcgtggacgtgtccaggtc 156
||||||||||| |||||||||| |||||||||||||||
Sbjct: 38 agacccaacatagggttgggcgaggacgtgtccaggtc 1
>53932_ptc-miRf12110-akr:pmrd
Length = 94
Score = 83.8 bits (42), Expect = 4e-17
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 67 gttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaa 126
||||||||||||||| || |||| ||||||| ||||| || |||||||| ||||||||
Sbjct: 1 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 60
Query: 127 catggggttgggcgtggacgtgtccaggtccaac 160
| || ||||||||||||| |||| ||||||||||
Sbjct: 61 cgtgaggttgggcgtggaagtgttcaggtccaac 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
||||||||||||||| |||||||| ||| || ||||||| | ||||| ||||| ||
Sbjct: 1 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 60
Query: 61 tgtggggttgggcgtgga 78
||| |||||||||||||
Sbjct: 61 cgtgaggttgggcgtgga 78
>53931_ptc-miRf12109-akr:pmrd
Length = 94
Score = 83.8 bits (42), Expect = 4e-17
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 67 gttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaa 126
||||||||||||||| || |||| ||||||| ||||| || |||||||| ||||||||
Sbjct: 1 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 60
Query: 127 catggggttgggcgtggacgtgtccaggtccaac 160
| || ||||||||||||| |||| ||||||||||
Sbjct: 61 cgtgaggttgggcgtggaagtgttcaggtccaac 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
||||||||||||||| |||||||| ||| || ||||||| | ||||| ||||| ||
Sbjct: 1 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 60
Query: 61 tgtggggttgggcgtgga 78
||| |||||||||||||
Sbjct: 61 cgtgaggttgggcgtgga 78
>53930_ptc-miRf12108-akr:pmrd
Length = 94
Score = 83.8 bits (42), Expect = 4e-17
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 67 gttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaa 126
||||||||||||||| || |||| ||||||| ||||| || |||||||| ||||||||
Sbjct: 1 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 60
Query: 127 catggggttgggcgtggacgtgtccaggtccaac 160
| || ||||||||||||| |||| ||||||||||
Sbjct: 61 cgtgaggttgggcgtggaagtgttcaggtccaac 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
||||||||||||||| |||||||| ||| || ||||||| | ||||| ||||| ||
Sbjct: 1 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 60
Query: 61 tgtggggttgggcgtgga 78
||| |||||||||||||
Sbjct: 61 cgtgaggttgggcgtgga 78
>53929_ptc-miRf12107-akr:pmrd
Length = 94
Score = 83.8 bits (42), Expect = 4e-17
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 67 gttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaa 126
||||||||||||||| || |||| ||||||| ||||| || |||||||| ||||||||
Sbjct: 1 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 60
Query: 127 catggggttgggcgtggacgtgtccaggtccaac 160
| || ||||||||||||| |||| ||||||||||
Sbjct: 61 cgtgaggttgggcgtggaagtgttcaggtccaac 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
||||||||||||||| |||||||| ||| || ||||||| | ||||| ||||| ||
Sbjct: 1 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 60
Query: 61 tgtggggttgggcgtgga 78
||| |||||||||||||
Sbjct: 61 cgtgaggttgggcgtgga 78
>52771_ptc-miRf10949-akr:pmrd
Length = 96
Score = 71.9 bits (36), Expect = 1e-13
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 63 tggggttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagac 122
|||||||||||||||| ||||| |||| ||| |||| ||| | | || |||||| |||
Sbjct: 1 tggggttgggcgtggatgcgtccaggttcaaaatggagttagatgcggtcgcgtccagat 60
Query: 123 ccaacatggggttgggcgtggacgtgtccaggtcca 158
||||||||||||||||||| |||| ||||| |||||
Sbjct: 61 ccaacatggggttgggcgttgacgcgtccaagtcca 96
>52009_ptc-miRf10187-akr:pmrd
Length = 113
Score = 71.9 bits (36), Expect = 1e-13
Identities = 82/96 (85%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 65 gggttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagaccc 124
|||||||||||||||||||| |||| |||||||| ||| | || | |||||| || ||
Sbjct: 9 gggttgggcgtggacgcgtccaggtccaacatggagttaggcgcgaacgcgt-taaggcc 67
Query: 125 aacatggggttgggcgtggacgtgtccaggtccaac 160
||||||||||||| ||||| || |||||||||||||
Sbjct: 68 aacatggggttggtcgtggtcgcgtccaggtccaac 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtccaggtc 24
||||||||||||||||||||||||
Sbjct: 11 gttgggcgtggacgcgtccaggtc 34
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 91 caacatggggttggtcggggacgcgtctagacccaacatggggttgg 137
||||||||||||||||| || |||||| || |||||| ||||||||
Sbjct: 67 caacatggggttggtcgtggtcgcgtccaggtccaacaaggggttgg 113
>52019_ptc-miRf10197-akr:pmrd
Length = 103
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 67 gttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaa 126
||||||||||||||| || |||| ||||||| ||||| || |||||||| ||||||||
Sbjct: 82 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 23
Query: 127 catggggttgggcgtgga 144
| || |||||||||||||
Sbjct: 22 cgtgaggttgggcgtgga 5
Score = 60.0 bits (30), Expect = 5e-10
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 119 agacccaacatggggttgggcgtggacgtgtccaggtccaac 160
||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 96 agacccaacatggagttgggcgtggacgcatccaggtccaac 55
Score = 44.1 bits (22), Expect = 3e-05
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
||||||||||||||| |||||||| ||| || ||||||| | ||||| ||||| ||
Sbjct: 82 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 23
Query: 61 tgtggggttgggcgtgga 78
||| |||||||||||||
Sbjct: 22 cgtgaggttgggcgtgga 5
>52018_ptc-miRf10196-akr:pmrd
Length = 103
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 67 gttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaa 126
||||||||||||||| || |||| ||||||| ||||| || |||||||| ||||||||
Sbjct: 82 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 23
Query: 127 catggggttgggcgtgga 144
| || |||||||||||||
Sbjct: 22 cgtgaggttgggcgtgga 5
Score = 60.0 bits (30), Expect = 5e-10
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 119 agacccaacatggggttgggcgtggacgtgtccaggtccaac 160
||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 96 agacccaacatggagttgggcgtggacgcatccaggtccaac 55
Score = 44.1 bits (22), Expect = 3e-05
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
||||||||||||||| |||||||| ||| || ||||||| | ||||| ||||| ||
Sbjct: 82 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 23
Query: 61 tgtggggttgggcgtgga 78
||| |||||||||||||
Sbjct: 22 cgtgaggttgggcgtgga 5
>52017_ptc-miRf10195-akr:pmrd
Length = 103
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 67 gttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaa 126
||||||||||||||| || |||| ||||||| ||||| || |||||||| ||||||||
Sbjct: 82 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 23
Query: 127 catggggttgggcgtgga 144
| || |||||||||||||
Sbjct: 22 cgtgaggttgggcgtgga 5
Score = 60.0 bits (30), Expect = 5e-10
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 119 agacccaacatggggttgggcgtggacgtgtccaggtccaac 160
||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 96 agacccaacatggagttgggcgtggacgcatccaggtccaac 55
Score = 44.1 bits (22), Expect = 3e-05
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
||||||||||||||| |||||||| ||| || ||||||| | ||||| ||||| ||
Sbjct: 82 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 23
Query: 61 tgtggggttgggcgtgga 78
||| |||||||||||||
Sbjct: 22 cgtgaggttgggcgtgga 5
>52016_ptc-miRf10194-akr:pmrd
Length = 103
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 67 gttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaa 126
||||||||||||||| || |||| ||||||| ||||| || |||||||| ||||||||
Sbjct: 82 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 23
Query: 127 catggggttgggcgtgga 144
| || |||||||||||||
Sbjct: 22 cgtgaggttgggcgtgga 5
Score = 60.0 bits (30), Expect = 5e-10
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 119 agacccaacatggggttgggcgtggacgtgtccaggtccaac 160
||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 96 agacccaacatggagttgggcgtggacgcatccaggtccaac 55
Score = 44.1 bits (22), Expect = 3e-05
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttgggcattgtcgcgtttagacctaa 60
||||||||||||||| |||||||| ||| || ||||||| | ||||| ||||| ||
Sbjct: 82 gttgggcgtggacgcatccaggtccaacatgcagttgggcgaagacgcgtccagacccaa 23
Query: 61 tgtggggttgggcgtgga 78
||| |||||||||||||
Sbjct: 22 cgtgaggttgggcgtgga 5
>51898_ptc-miRf10076-akr:pmrd
Length = 139
Score = 65.9 bits (33), Expect = 9e-12
Identities = 97/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 44 gtcgcgtttagacctaatgtggggttgggcgtggacgcgtctaggtacaacatggggttg 103
||||||| ||||| || ||| ||||||| |||||||| || | | |||| ||| ||||
Sbjct: 121 gtcgcgtccagacccaacgtgaggttgggtgtggacgcatccaaggccaacctggagttg 62
Query: 104 gtcggggacgcgtctagacccaacatggggttgggcgtggacgtgtccaggtccaac 160
| |||| ||||||| || |||||| |||| ||||||||||||||||||| |||||||
Sbjct: 61 ggcgggaacgcgtccag-cccaacgtgggattgggcgtggacgtgtccaagtccaac 6
>54019_ptc-miRf12197-akr:pmrd
Length = 83
Score = 63.9 bits (32), Expect = 3e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 113 gcgtctagacccaacatggggttgggcgtggacgtgtccaggtccaac 160
||||| ||||||||| |||||||||||| ||||| |||||||||||||
Sbjct: 25 gcgtccagacccaacgtggggttgggcgcggacgcgtccaggtccaac 72
Score = 56.0 bits (28), Expect = 8e-09
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 53 agacctaatgtggggttgggcgtggacgcgtctaggtacaacatggggttgg 104
||||| || ||||||||||||| ||||||||| |||| ||||||| ||||||
Sbjct: 31 agacccaacgtggggttgggcgcggacgcgtccaggtccaacatgtggttgg 82
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtccaggtctaacgtggggttggg 39
|||||||| ||||||||||||||| ||| || |||||||
Sbjct: 45 gttgggcgcggacgcgtccaggtccaacatgtggttggg 83
>52859_ptc-miRf11037-akr:pmrd
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 63 tggggttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagac 122
|||||||||||| |||| |||| ||| |||||||| | ||| || || |||||| ||||
Sbjct: 88 tggggttgggcgaggacacgtcccggtccaacatggaggtggacgcggtcgcgtccagac 29
Query: 123 ccaacatggggttgggcgtggacg 146
|||||||||| ||||||| |||||
Sbjct: 28 ccaacatgggattgggcggggacg 5
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 110 gacgcgtctagacccaacatggggttgggcgtggacgtgtccaggtccaac 160
|||||||| || ||||||||||||||||||| |||| |||| ||||||||
Sbjct: 107 gacgcgtccaggcccaacatggggttgggcgaggacacgtcccggtccaac 57
>54053_ptc-miRf12231-akr:pmrd
Length = 73
Score = 61.9 bits (31), Expect = 1e-10
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 101 ttggtcggggacgcgtctagacccaacatggggttgggcgtggacgtgtccaggtccaa 159
|||| |||||||||||| ||||||| | ||||||||||| |||| | ||||||||||||
Sbjct: 7 ttggacggggacgcgtccagacccaccgtggggttgggcatggatgcgtccaggtccaa 65
>53021_ptc-miRf11199-akr:pmrd
Length = 128
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 86 aggtacaacatggggttggtcggggacgcgtctagacccaacatggggttgggcgtggac 145
|||| |||||||| ||||| || || ||||||||||||||| |||||||| ||||| ||
Sbjct: 56 aggtccaacatggcgttggacgtggtcgcgtctagacccaatgtggggttgtgcgtgcac 115
Query: 146 gtgtcca 152
|||||||
Sbjct: 116 gtgtcca 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 19 caggtctaacgtggggttgggcattgtcgcgtttagacctaatgtggggttgggcgtg 76
|||||| ||| ||| ||||| | | ||||||| |||||| |||||||||||| |||||
Sbjct: 55 caggtccaacatggcgttggacgtggtcgcgtctagacccaatgtggggttgtgcgtg 112
>54323_ptc-miRf12501-akr:pmrd
Length = 84
Score = 60.0 bits (30), Expect = 5e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 72 gcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaacatgg 131
||||||||||||| |||| |||||||| ||||| ||||||||||| | | ||||| ||
Sbjct: 1 gcgtggacgcgtccaggtccaacatggagttgggtggggacgcgtccaaatccaacttga 60
Query: 132 ggttgggcgtggac 145
|||| |||||||||
Sbjct: 61 ggttaggcgtggac 74
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 6 gcgtggacgcgtccaggtctaacgtggggttggg 39
||||||||||||||||||| ||| ||| ||||||
Sbjct: 1 gcgtggacgcgtccaggtccaacatggagttggg 34
>53433_ptc-miRf11611-akr:pmrd
Length = 105
Score = 60.0 bits (30), Expect = 5e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 53 agacctaatgtggggttgggcgtggacgcgtctaggtacaacatgg 98
||||| || |||||||||||||||||||||| ||||| ||||||||
Sbjct: 16 agacccaacgtggggttgggcgtggacgcgtataggtccaacatgg 61
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 119 agacccaacatggggttgggcgtggacgtgtccaggtccaac 160
||||||||| |||||||||||||||||| || |||||||||
Sbjct: 16 agacccaacgtggggttgggcgtggacgcgtataggtccaac 57
>52310_ptc-miRf10488-akr:pmrd
Length = 109
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 91 caacatggggttggtcggggacgcgtctagacccaacatgg 131
|||||||||||||| | |||||||||| |||||||||||||
Sbjct: 109 caacatggggttgggcagggacgcgtccagacccaacatgg 69
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 119 agacccaacatggggttgggcgtggac 145
|||| ||||||||||||||||||||||
Sbjct: 48 agactcaacatggggttgggcgtggac 22
>53668_ptc-miRf11846-akr:pmrd
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 63 tggggttgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagac 122
|||| ||||||||||||||||| ||| |||||| | ||||| || | |||||| | ||
Sbjct: 5 tgggattgggcgtggacgcgtccaggcccaacatagagttggacgcagtcgcgtccaaac 64
Query: 123 ccaacatggggttgggcgtggacgtgtccaggtccaac 160
|||| ||||||||| ||||||||||| ||||||||
Sbjct: 65 ccaatgtggggttggctttggacgtgtcccggtccaac 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 125 aacatggggttgggcgtggacgtgtccaggtccaac 160
|||||||| ||||||||||||| ||||||| |||||
Sbjct: 1 aacatgggattgggcgtggacgcgtccaggcccaac 36
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 ttgggcgtggacgcgtccagg 22
|||||||||||||||||||||
Sbjct: 10 ttgggcgtggacgcgtccagg 30
>52500_ptc-miRf10678-akr:pmrd
Length = 127
Score = 52.0 bits (26), Expect = 1e-07
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 79 cgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaacatggggttggg 138
|||||| |||| |||||||| ||||| || || |||||| |||||| ||||| |||||
Sbjct: 13 cgcgtccaggttcaacatggcgttggacgcgggcgcgtccagacccgacatgaagttgga 72
Query: 139 cgtggacgtgtccaggtccaac 160
|| |||||||||||| |||||
Sbjct: 73 cgccgacgtgtccaggcccaac 94
>52728_ptc-miRf10906-akr:pmrd
Length = 123
Score = 50.1 bits (25), Expect = 5e-07
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 69 tgggcgtggacgcgtctaggtacaacatggggttggtcggggacgcgtctagacccaaca 128
|||||||||||||||| |||| |||||| ||||||| | ||||| | | || ||||||
Sbjct: 1 tgggcgtggacgcgtccaggtccaacatagggttggacatggacgtgcccaggcccaacg 60
Query: 129 tggggttgg 137
|||||||||
Sbjct: 61 tggggttgg 69
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 3 tgggcgtggacgcgtccaggtctaacgtggggttgg 38
|||||||||||||||||||||| ||| | |||||||
Sbjct: 1 tgggcgtggacgcgtccaggtccaacatagggttgg 36
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 135 tgggcgtggacgtgtccaggtccaac 160
|||||||||||| |||||||||||||
Sbjct: 1 tgggcgtggacgcgtccaggtccaac 26
>52764_ptc-miRf10942-akr:pmrd
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 72 gcgtggacgcgtctaggtacaacatggggttggtcg 107
||||||||||||| |||| |||||||| ||||||||
Sbjct: 100 gcgtggacgcgtccaggtccaacatggagttggtcg 65
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 6 gcgtggacgcgtccaggtctaacgtggggttgg 38
||||||||||||||||||| ||| ||| |||||
Sbjct: 100 gcgtggacgcgtccaggtccaacatggagttgg 68
>51865_ptc-miRf10043-akr:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 72 gcgtggacgcgtctaggtacaacatggggttggtcg 107
||||||||||||| |||| |||||||| ||||||||
Sbjct: 96 gcgtggacgcgtccaggtccaacatggagttggtcg 61
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 6 gcgtggacgcgtccaggtctaacgtggggttgg 38
||||||||||||||||||| ||| ||| |||||
Sbjct: 96 gcgtggacgcgtccaggtccaacatggagttgg 64
>51864_ptc-miRf10042-akr:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 72 gcgtggacgcgtctaggtacaacatggggttggtcg 107
||||||||||||| |||| |||||||| ||||||||
Sbjct: 94 gcgtggacgcgtccaggtccaacatggagttggtcg 59
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 6 gcgtggacgcgtccaggtctaacgtggggttgg 38
||||||||||||||||||| ||| ||| |||||
Sbjct: 94 gcgtggacgcgtccaggtccaacatggagttgg 62
>52279_ptc-miRf10457-akr:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 132 ggttgggcgtggacgtgtccaggtcca 158
||||||| |||||||||||||||||||
Sbjct: 17 ggttgggtgtggacgtgtccaggtcca 43
>52011_ptc-miRf10189-akr:pmrd
Length = 165
Score = 46.1 bits (23), Expect = 8e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 115 gtctagacccaacatggggttgggcgtggac 145
||||||||||||| ||||||||||||||||
Sbjct: 1 gtctagacccaactgggggttgggcgtggac 31
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 64 ggggttgggcgtggacgcgtctag 87
|||||||||||||||| |||||||
Sbjct: 16 ggggttgggcgtggacacgtctag 39
>53953_ptc-miRf12131-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtccagg 22
||||||||||||||||||||||
Sbjct: 14 gttgggcgtggacgcgtccagg 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 120 gacccaacatggggttgggcgtggacgtgtccaggtccaac 160
|||||||| | | |||||||||||||| ||||||| |||||
Sbjct: 1 gacccaacttagagttgggcgtggacgcgtccaggcccaac 41
>53050_ptc-miRf11228-akr:pmrd
Length = 130
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 119 agacccaacatggggttgggcgtggacgtgtcca 152
||||||||| ||||||||||| |||||| |||||
Sbjct: 5 agacccaacgtggggttgggcatggacgcgtcca 38
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 53 agacctaatgtggggttgggcgtggacgcgtc 84
||||| || |||||||||||| ||||||||||
Sbjct: 5 agacccaacgtggggttgggcatggacgcgtc 36
>53049_ptc-miRf11227-akr:pmrd
Length = 147
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 119 agacccaacatggggttgggcgtggacgtgtcca 152
||||||||| ||||||||||| |||||| |||||
Sbjct: 14 agacccaacgtggggttgggcatggacgcgtcca 47
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 53 agacctaatgtggggttgggcgtggacgcgtc 84
||||| || |||||||||||| ||||||||||
Sbjct: 14 agacccaacgtggggttgggcatggacgcgtc 45
>52787_ptc-miRf10965-akr:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 135 tgggcgtggacgtgtccaggtccaac 160
|||||||||||| |||||||||||||
Sbjct: 28 tgggcgtggacgcgtccaggtccaac 3
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 tgggcgtggacgcgtccaggtc 24
||||||||||||||||||||||
Sbjct: 28 tgggcgtggacgcgtccaggtc 7
>52786_ptc-miRf10964-akr:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 135 tgggcgtggacgtgtccaggtccaac 160
|||||||||||| |||||||||||||
Sbjct: 29 tgggcgtggacgcgtccaggtccaac 4
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 3 tgggcgtggacgcgtccaggtc 24
||||||||||||||||||||||
Sbjct: 29 tgggcgtggacgcgtccaggtc 8
>52425_ptc-miRf10603-akr:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 aatgtggggttgggcgtggacgcgtc 84
||||||||||||||||||||| ||||
Sbjct: 76 aatgtggggttgggcgtggacacgtc 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 141 tggacgtgtccaggtccaac 160
||||||||||||||||||||
Sbjct: 1 tggacgtgtccaggtccaac 20
>52301_ptc-miRf10479-akr:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 44 gtcgcgtttagacctaatgtggggttgggcgtggacgcgtctaggt 89
||||||| ||| || || ||||||||||| ||||||||||| ||||
Sbjct: 40 gtcgcgtctaggcccaaagtggggttgggtgtggacgcgtccaggt 85
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtccaggtc 24
|||||| |||||||||||||||||
Sbjct: 63 gttgggtgtggacgcgtccaggtc 86
>52213_ptc-miRf10391-akr:pmrd
Length = 77
Score = 44.1 bits (22), Expect = 3e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 109 ggacgcgtctagacccaacatggggttgggcgtggacg 146
|||||||||||| |||||| ||||| ||||||||||||
Sbjct: 5 ggacgcgtctag-cccaacttgggggtgggcgtggacg 41
>51873_ptc-miRf10051-akr:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 59 aatgtggggttgggcgtggacgcgtc 84
||||||||||||||||||||| ||||
Sbjct: 76 aatgtggggttgggcgtggacacgtc 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 141 tggacgtgtccaggtccaac 160
||||||||||||||||||||
Sbjct: 1 tggacgtgtccaggtccaac 20
>53421_ptc-miRf11599-akr:pmrd
Length = 98
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 108 gggacgcgtctagacccaacatggggttgggcgtggacgtgtcca 152
||||||| || ||||||||| || ||||||| ||||||||||||
Sbjct: 12 gggacgcatcaagacccaacttgtggttggggttggacgtgtcca 56
>53057_ptc-miRf11235-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 122 cccaacatggggttgggcgtggacg 146
|||||| ||||||||||||||||||
Sbjct: 25 cccaacgtggggttgggcgtggacg 49
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 gtggggttgggcgtggacgc 81
||||||||||||||||||||
Sbjct: 31 gtggggttgggcgtggacgc 50
>53056_ptc-miRf11234-akr:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 122 cccaacatggggttgggcgtggacg 146
|||||| ||||||||||||||||||
Sbjct: 25 cccaacgtggggttgggcgtggacg 49
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 62 gtggggttgggcgtggacgc 81
||||||||||||||||||||
Sbjct: 31 gtggggttgggcgtggacgc 50
>52198_ptc-miRf10376-akr:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 gtccaggtctaacgtggggttgggc 40
||||||||| |||||||||||||||
Sbjct: 74 gtccaggtccaacgtggggttgggc 98
>54165_ptc-miRf12343-akr:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 110 gacgcgtctagacccaacatggggttgggcgtggac 145
|||||||||||||||||| | ||| ||||| |||||
Sbjct: 121 gacgcgtctagacccaacttaggggtgggcatggac 86
>53733_ptc-miRf11911-akr:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtcca 20
||||||||||||||||||||
Sbjct: 11 gttgggcgtggacgcgtcca 30
>53732_ptc-miRf11910-akr:pmrd
Length = 81
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gttgggcgtggacgcgtcca 20
||||||||||||||||||||
Sbjct: 11 gttgggcgtggacgcgtcca 30
>53604_ptc-miRf11782-akr:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 122 cccaacatggggttgggcgtggacgtgtccag 153
|||||| ||| |||||||||||||| ||||||
Sbjct: 57 cccaacttggagttgggcgtggacgagtccag 88
>52885_ptc-miRf11063-akr:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 122 cccaacatggggttgggcgtggacgtgtccag 153
|||||| ||| |||||||||||||| ||||||
Sbjct: 57 cccaacttggagttgggcgtggacgagtccag 88
>52147_ptc-miRf10325-akr:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 110 gacgcgtctagacccaacatggggttgggcgtggac 145
|||||||||||||||||| | ||| ||||| |||||
Sbjct: 7 gacgcgtctagacccaacttaggggtgggcatggac 42
>51936_ptc-miRf10114-akr:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 63 tggggttgggcgtggacgcg 82
||||||||||||||||||||
Sbjct: 27 tggggttgggcgtggacgcg 8
