miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51945_ptc-miRf10123-akr:pmrd
Length = 186
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 108 cactccggtcattattggtgaccttccttagtgttgttggat 149
||||||||||| |||||||||||||||| ||| |||||||
Sbjct: 124 cactccggtcaccattggtgaccttccttgatgtcgttggat 165
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 9 acatcaaggaaggtcaccaat 29
|||||||||||||||||||||
Sbjct: 157 acatcaaggaaggtcaccaat 137
>52944_ptc-miRf11122-akr:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 acatcaaggaaggtcaccaa 28
||||||||||||||||||||
Sbjct: 13 acatcaaggaaggtcaccaa 32
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 atccaataacatcaaggaaggtca 24
|||||| |||||||||||||||||
Sbjct: 148 atccaacaacatcaaggaaggtca 125
>52519_ptc-miRf10697-akr:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 116 tcattattggtgaccttccttagtgttg 143
||||||||||||||||| ||| ||||||
Sbjct: 97 tcattattggtgacctttcttggtgttg 124
