miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>51907_ptc-miRf10085-akr:pmrd
          Length = 132

 Score = 56.0 bits (28), Expect = 3e-09
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 11  aacccaagaatgttgggtctagcagctcattagacctatatatacttgggct 62
           |||||||| |||||||||||||||||||  ||||   |||||||||||||||
Sbjct: 123 aacccaaggatgttgggtctagcagctcgctagattcatatatacttgggct 72




>52316_ptc-miRf10494-akr:pmrd
          Length = 92

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                           
Query: 23 ttgggtctagcagctcattagacctatatatacttgggcttagcgcgta 71
          |||||||| | |||||  |||||||| || |||||||||||||| ||||
Sbjct: 1  ttgggtctggtagctcgctagacctagatgtacttgggcttagcacgta 49