miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52733_ptc-miRf10911-akr:pmrd
Length = 85
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 gtctggacacgtccacgcccagcttggagtgtgggtctggacgcctctagaaccaacttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctggacacgtccacgcccagcttggagtgtgggtctggacgcctctagaaccaacttc 60
Query: 61 gagttgggtgtggacgcctccagac 85
|||||||||||||||||||||||||
Sbjct: 61 gagttgggtgtggacgcctccagac 85
>53652_ptc-miRf11830-akr:pmrd
Length = 120
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1 gtctggacacgtccacgcccagcttggagtg 31
|||||||||||||||||||||||||||||||
Sbjct: 31 gtctggacacgtccacgcccagcttggagtg 1
>53650_ptc-miRf11828-akr:pmrd
Length = 120
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1 gtctggacacgtccacgcccagcttggagtg 31
|||||||||||||||||||||||||||||||
Sbjct: 31 gtctggacacgtccacgcccagcttggagtg 1
>52787_ptc-miRf10965-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 ctggacacgtccacgcccagcttgg 27
|||||| ||||||||||||||||||
Sbjct: 10 ctggacgcgtccacgcccagcttgg 34
>52786_ptc-miRf10964-akr:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 3 ctggacacgtccacgcccagcttgg 27
|||||| ||||||||||||||||||
Sbjct: 11 ctggacgcgtccacgcccagcttgg 35
>52426_ptc-miRf10604-akr:pmrd
Length = 160
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 3 ctggacacgtccacgccca 21
|||||||||||||||||||
Sbjct: 153 ctggacacgtccacgccca 135
