miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>52662_ptc-miRf10840-akr:pmrd
          Length = 113

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                     
Query: 37 acccaagaaaattgggttctgatgcaagattcattagccttgg 79
          ||||||||  ||||||| || |||||||||||||||| |||||
Sbjct: 65 acccaagagcattgggtgctaatgcaagattcattagtcttgg 23




>52124_ptc-miRf10302-akr:pmrd
          Length = 113

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                     
Query: 37 acccaagaaaattgggttctgatgcaagattcattagccttgg 79
          ||||||||  ||||||| || |||||||||||||||| |||||
Sbjct: 65 acccaagagcattgggtgctaatgcaagattcattagtcttgg 23




>53297_ptc-miRf11475-akr:pmrd
          Length = 110

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 8  gacccaagagaaatgagtcttgacgc 33
          |||||||||||| |||||||||||||
Sbjct: 92 gacccaagagaattgagtcttgacgc 67