miRNEST 2.0, an integrative microRNA resource :: BLAST
>31917_mmu-mir-196b:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 60
Query: 68 gacactgccttcattacttcagttg 92
|||||||||||||||||||||||||
Sbjct: 61 gacactgccttcattacttcagttg 85
>32784_rno-mir-196b:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 60
Query: 68 gacactgccttcattacttcagttg 92
|||||||||||||||||||||||||
Sbjct: 61 gacactgccttcattacttcagttg 85
>33270_bta-mir-196b:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcac 60
Query: 68 gacactgccttcattacttcagttg 92
|||||||||||||||||||||||||
Sbjct: 61 gacactgccttcattacttcagttg 85
>28509_hsa-mir-196b:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 9 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 60
Query: 69 acactgccttcattacttcagttg 92
||||||||||||||||||||||||
Sbjct: 61 acactgccttcattacttcagttg 84
>30889_ppy-mir-196b:mirbase
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 9 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 60
Query: 69 acactgccttcattacttcagttg 92
||||||||||||||||||||||||
Sbjct: 61 acactgccttcattacttcagttg 84
>30273_ptr-mir-196b:mirbase
Length = 83
Score = 165 bits (83), Expect = 7e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 9 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 60
Query: 69 acactgccttcattacttcagtt 91
|||||||||||||||||||||||
Sbjct: 61 acactgccttcattacttcagtt 83
>27081_eca-mir-196b:mirbase
Length = 84
Score = 159 bits (80), Expect = 5e-40
Identities = 83/84 (98%)
Strand = Plus / Plus
Query: 9 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 68
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttgggatccagctttctctcgacagcacg 60
Query: 69 acactgccttcattacttcagttg 92
||||||||||||||||||||||||
Sbjct: 61 acactgccttcattacttcagttg 84
>34027_ssc-mir-196b:mirbase
Length = 80
Score = 159 bits (80), Expect = 5e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 10 ctggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacga 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacga 60
Query: 70 cactgccttcattacttcag 89
||||||||||||||||||||
Sbjct: 61 cactgccttcattacttcag 80
>34028_ssc-mir-196b:mirbase
Length = 80
Score = 159 bits (80), Expect = 5e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 10 ctggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacga 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacga 60
Query: 70 cactgccttcattacttcag 89
||||||||||||||||||||
Sbjct: 61 cactgccttcattacttcag 80
>27792_mml-mir-196b:mirbase
Length = 75
Score = 149 bits (75), Expect = 4e-37
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 9 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actggtcggtgatttaggtagtttcctgttgttgggatccacctttctctcgacagcacg 60
Query: 69 acactgccttcatta 83
|||||||||||||||
Sbjct: 61 acactgccttcatta 75
>31526_oan-mir-196b:mirbase
Length = 85
Score = 137 bits (69), Expect = 2e-33
Identities = 82/85 (96%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttggga-tccacctttctctcgacagca 66
|||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aactggtctgtgatttaggtagtttcctgttgttggggctccacctttctctcgacagca 60
Query: 67 cgacactgccttcattacttcagtt 91
|||||||||||||||||||||||||
Sbjct: 61 cgacactgccttcattacttcagtt 85
>27416_mdo-mir-196b:mirbase
Length = 86
Score = 131 bits (66), Expect = 1e-31
Identities = 82/86 (95%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttggga-tccacctttctctcgacagca 66
|||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 aactggtctgtgatttaggtagtttcctgttgttggggctccacctttctctcgacagca 60
Query: 67 cgacactgccttcattacttcagttg 92
||| ||||||||||||||||||||||
Sbjct: 61 cgatactgccttcattacttcagttg 86
>26754_cfa-mir-196b:mirbase
Length = 58
Score = 115 bits (58), Expect = 6e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 23 taggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttca 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taggtagtttcctgttgttgggatccacctttctctcgacagcacgacactgccttca 58
>25986_gga-mir-196-2:mirbase
Length = 94
Score = 93.7 bits (47), Expect = 2e-20
Identities = 78/87 (89%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 8 aactggtcggtgatttaggtagtttcctgttgttggga-tccacctttctctcgacagca 66
||||| || ||| ||||||||||||| |||||||||| |||||||||||||| ||||||
Sbjct: 1 aactgctctgtggtttaggtagtttcatgttgttggggctccacctttctctctacagca 60
Query: 67 cgacactgccttcattacttcagttga 93
||| |||||||| ||||||||||||||
Sbjct: 61 cgaaactgccttaattacttcagttga 87
>25817_xtr-mir-196b:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttggg-atccacctttctctcgacagcacgacactgccttc 79
|||||||||||| |||||||||| || |||||||||||| ||| || || ||||||||
Sbjct: 14 tttaggtagttttatgttgttgggcattcacctttctctctacaacaagaaactgcctta 73
Query: 80 attacttcagt 90
||||| |||||
Sbjct: 74 attacatcagt 84
>25985_gga-mir-196-1:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 6 agaactggtcggtgatttaggtagtttcctgttgttggg 44
||||||| || |||| |||||||||||| ||||||||||
Sbjct: 7 agaactgctctgtgaattaggtagtttcatgttgttggg 45
>25816_xtr-mir-196a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttgggat 46
||||||||||||| ||||||||||||
Sbjct: 23 tttaggtagtttcatgttgttgggat 48
>25987_gga-mir-196-3:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttgggat 46
||||||||||||| ||||||||||||
Sbjct: 22 tttaggtagtttcatgttgttgggat 47
>34347_dre-mir-196a-1:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttgggat 46
||||||||||||| ||||||||||||
Sbjct: 19 tttaggtagtttcatgttgttgggat 44
>34348_dre-mir-196a-2:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttgggat 46
||||||||||||| ||||||||||||
Sbjct: 9 tttaggtagtttcatgttgttgggat 34
>27515_age-mir-196:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>27580_lla-mir-196:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>27791_mml-mir-196a-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>28324_ggo-mir-196-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>28508_hsa-mir-196a-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>30112_ppa-mir-196:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>30272_ptr-mir-196a-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>30888_ppy-mir-196-2:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>31525_oan-mir-196a:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 28 ttaggtagtttcatgttgttgggat 52
>31916_mmu-mir-196a-2:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 15 ttaggtagtttcatgttgttgggat 39
>32783_rno-mir-196a:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 24 ttaggtagtttcatgttgttgggat 48
>33269_bta-mir-196a-2:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 15 ttaggtagtttcatgttgttgggat 39
>34026_ssc-mir-196a:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 ttaggtagtttcctgttgttgggat 46
|||||||||||| ||||||||||||
Sbjct: 21 ttaggtagtttcatgttgttgggat 45
>34623_fru-mir-196a-2:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttgggatcca 49
||||||||||||| |||||||||| ||||
Sbjct: 9 tttaggtagtttcatgttgttggggtcca 37
>34770_tni-mir-196a-2:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttgggatcca 49
||||||||||||| |||||||||| ||||
Sbjct: 9 tttaggtagtttcatgttgttggggtcca 37
>26752_cfa-mir-196a-1:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 9 gtgaattaggtagtttcatgttgttggg 36
>26753_cfa-mir-196a-2:mirbase
Length = 59
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 23 taggtagtttcctgttgttgggat 46
||||||||||| ||||||||||||
Sbjct: 1 taggtagtttcatgttgttgggat 24
>27080_eca-mir-196a:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgagttaggtagtttcatgttgttggg 28
>27790_mml-mir-196a-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>28323_ggo-mir-196-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>28507_hsa-mir-196a-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>30887_ppy-mir-196-1:mirbase
Length = 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 1 gtgaattaggtagtttcatgttgttggg 28
>33268_bta-mir-196a-1:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||| |||||||||||| ||||||||||
Sbjct: 18 gtgaattaggtagtttcatgttgttggg 45
>34349_dre-mir-196b:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
||||||||||||||||| |||||||||
Sbjct: 5 gtgatttaggtagtttcaagttgttggg 32
>34351_dre-mir-196d:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gtgatttaggtagtttcctgttgttggg 44
|||||||||||||||| ||||||||||
Sbjct: 2 gtgatttaggtagttttatgttgttggg 29
>34622_fru-mir-196a-1:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttggg 44
||||||||||||| ||||||||||
Sbjct: 14 tttaggtagtttcatgttgttggg 37
>34769_tni-mir-196a-1:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tttaggtagtttcctgttgttggg 44
||||||||||||| ||||||||||
Sbjct: 14 tttaggtagtttcatgttgttggg 37
