miRNEST 2.0, an integrative microRNA resource :: BLAST
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 6 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctca 79
Query: 66 ctgaacaatgaatgcaactgtggccccgc 94
|||||||||||||||||||||||||||||
Sbjct: 80 ctgaacaatgaatgcaactgtggccccgc 108
>28223_mne-mir-181b:mirbase
Length = 110
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 6 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctca 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctca 79
Query: 66 ctgaacaatgaatgcaactgtggccccgc 94
|||||||||||||||||||||||||||||
Sbjct: 80 ctgaacaatgaatgcaactgtggccccgc 108
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 170 bits (86), Expect = 1e-43
Identities = 92/94 (97%)
Strand = Plus / Plus
Query: 3 ttcttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagc 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 17 ttcttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagc 76
Query: 63 tcactgaacaatgaatgcaactgtggccccgcat 96
|||||||||||||| |||||||||||||||||||
Sbjct: 77 tcactgaacaatgagtgcaactgtggccccgcat 110
>27579_lla-mir-181b:mirbase
Length = 110
Score = 168 bits (85), Expect = 5e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 6 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctca 65
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 20 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctca 79
Query: 66 ctgaacaatgaatgcaactgtggccccgc 94
|||||||||||||||||||||||||||||
Sbjct: 80 ctgaacaatgaatgcaactgtggccccgc 108
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 168 bits (85), Expect = 5e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 6 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctca 65
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 20 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctca 79
Query: 66 ctgaacaatgaatgcaactgtggccccgc 94
|||||||||||||||||||||||||||||
Sbjct: 80 ctgaacaatgaatgcaactgtggccccgc 108
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 168 bits (85), Expect = 5e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 6 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctca 65
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 20 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctca 79
Query: 66 ctgaacaatgaatgcaactgtggccccgc 94
|||||||||||||||||||||||||||||
Sbjct: 80 ctgaacaatgaatgcaactgtggccccgc 108
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 168 bits (85), Expect = 5e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 6 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctca 65
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 20 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctca 79
Query: 66 ctgaacaatgaatgcaactgtggccccgc 94
|||||||||||||||||||||||||||||
Sbjct: 80 ctgaacaatgaatgcaactgtggccccgc 108
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 168 bits (85), Expect = 5e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 6 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctca 65
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 20 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctca 79
Query: 66 ctgaacaatgaatgcaactgtggccccgc 94
|||||||||||||||||||||||||||||
Sbjct: 80 ctgaacaatgaatgcaactgtggccccgc 108
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 168 bits (85), Expect = 5e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 6 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctca 65
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 20 ttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctca 79
Query: 66 ctgaacaatgaatgcaactgtggccccgc 94
|||||||||||||||||||||||||||||
Sbjct: 80 ctgaacaatgaatgcaactgtggccccgc 108
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 163 bits (82), Expect = 3e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 9 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactg 68
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 82
Query: 69 aacaatgaatgcaactgtggccccgc 94
||||||||||||||||||||||||||
Sbjct: 83 aacaatgaatgcaactgtggccccgc 108
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 159 bits (80), Expect = 5e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 12 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaac 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaac 60
Query: 72 aatgaatgcaactgtggccc 91
||||||||||||||||||||
Sbjct: 61 aatgaatgcaactgtggccc 80
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 151 bits (76), Expect = 1e-37
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 11 aggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaa 70
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 aggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaa 60
Query: 71 caatgaatgcaactgtggcc 90
||||||||||||||||||||
Sbjct: 61 caatgaatgcaactgtggcc 80
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 8 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcact 67
|||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 1 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 60
Query: 68 gaacaatgaatgcaactgtggcccc 92
|||||||||||||||||||||||||
Sbjct: 61 gaacaatgaatgcaactgtggcccc 85
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 141 bits (71), Expect = 1e-34
Identities = 80/83 (96%)
Strand = Plus / Plus
Query: 10 aaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactga 69
|||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||
Sbjct: 1 aaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggacaagctcactga 60
Query: 70 acaatgaatgcaactgtggcccc 92
|||||||||||||||||||||||
Sbjct: 61 acaatgaatgcaactgtggcccc 83
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 115 bits (58), Expect = 6e-27
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 12 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaac 71
||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
Query: 72 aatgaatgcaactg 85
||||||||||||||
Sbjct: 61 aatgaatgcaactg 74
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 115 bits (58), Expect = 6e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 22 aacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaacaatgaatgca 81
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaacaatgaatgca 60
Query: 82 ac 83
||
Sbjct: 61 ac 62
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 9 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactg 68
||||||||||||||||||||||||||||||||||||| |||||| | || |||||||||
Sbjct: 1 aaaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggaagagctcactg 60
Query: 69 aacaatgaatgcaactgtg 87
||| |||||||||||||||
Sbjct: 61 aacgatgaatgcaactgtg 79
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 9 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactg 68
||||||||||||||||||||||||||||||||||||| |||||| | || |||||||||
Sbjct: 1 aaaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggaagagctcactg 60
Query: 69 aacaatgaatgcaactgtg 87
||| |||||||||||||||
Sbjct: 61 aacgatgaatgcaactgtg 79
>31511_oan-mir-181b:mirbase
Length = 110
Score = 105 bits (53), Expect = 6e-24
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 9 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactg 68
||||||| |||| |||||||||||||||||||||||| |||| || |||||||||||||
Sbjct: 14 aaaggtcccaatgaacattcattgctgtcggtgggtttaactctgaggacaagctcactg 73
Query: 69 aacaatgaatgcaactgtggc 89
||||||||||| |||||||||
Sbjct: 74 aacaatgaatggaactgtggc 94
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 93.7 bits (47), Expect = 2e-20
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 10 aaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactga 69
|||||||||||||||||||||||||||||||||||||| | | | |||||||| ||||
Sbjct: 1 aaggtcacaatcaacattcattgctgtcggtgggttgagttaagaacacaagctcgctga 60
Query: 70 acaatgaatgcaactgtggcccc 92
|| ||||||||||||||| ||||
Sbjct: 61 acgatgaatgcaactgtgtcccc 83
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 73.8 bits (37), Expect = 2e-14
Identities = 78/89 (87%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 3 ttcttaaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagc 62
||||| |||||||| |||||||||||||||||||||||||||| | |||| || |||
Sbjct: 18 ttcttcaaaggtcataatcaacattcattgctgtcggtgggtttagtcttgta-ac-agc 75
Query: 63 tcactgaacaatgaatgcaactgtggccc 91
|| |||||||||||||| |||||||||||
Sbjct: 76 tctctgaacaatgaatgtaactgtggccc 104
>27772_mml-mir-181d:mirbase
Length = 137
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 10 aaggtcacaatcaacattcattgctgtcggtgggttg 46
||||||||||||||||||||||| |||||||||||||
Sbjct: 24 aaggtcacaatcaacattcattgttgtcggtgggttg 60
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 10 aaggtcacaatcaacattcattgctgtcggtgggttg 46
||||||||||||||||||||||| |||||||||||||
Sbjct: 23 aaggtcacaatcaacattcattgttgtcggtgggttg 59
>33249_bta-mir-181d:mirbase
Length = 113
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 10 aaggtcacaatcaacattcattgctgtcggtgggttg 46
||||||||||||||||||||||| |||||||||||||
Sbjct: 23 aaggtcacaatcaacattcattgttgtcggtgggttg 59
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 11 aggtcacaatcaacattcattgctgtcggtgggttg 46
|||||||||||||||||||||| |||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgttgtcggtgggttg 60
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 11 aggtcacaatcaacattcattgctgtcggtgggttg 46
|||||||||||||||||||||| |||||||||||||
Sbjct: 24 aggtcacaatcaacattcattgttgtcggtgggttg 59
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 8e-11
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaacaatga 76
|||| ||||||||||||||||||||||||| | || |||| ||||||| ||| ||||||
Sbjct: 9 caataaacattcattgctgtcggtgggttgta--gtttagaaaagctcattgatcaatga 66
Query: 77 atgcaa 82
||||||
Sbjct: 67 atgcaa 72
>31512_oan-mir-181c:mirbase
Length = 95
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 13 gtcacaatcaacattcattgctgtcggtgggttg 46
||||||||||||||||||| ||||||||||||||
Sbjct: 10 gtcacaatcaacattcattactgtcggtgggttg 43
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggtt 45
|||||||||||||||||||||||||||||
Sbjct: 11 caatcaacattcattgctgtcggtgggtt 39
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggtt 45
|||||||||||||||||||||||||||||
Sbjct: 6 caatcaacattcattgctgtcggtgggtt 34
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 14 tcacaatcaacattcattgctgtcggtgggttg 46
||||||||||||||||||| |||||||||||||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggttg 33
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 14 tcacaatcaacattcattgctgtcggtgggttg 46
||||||||||||||||||| |||||||||||||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggttg 33
>32767_rno-mir-181d:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 12 ggtcacaatcaacattcattgctgtcggtgggttg 46
||||||||| ||||||||||| |||||||||||||
Sbjct: 1 ggtcacaattaacattcattgttgtcggtgggttg 35
>27062_eca-mir-181b:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggtt 38
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggtt 38
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tcaacattcattgctgtcggtgggtt 45
||||||||||||||||||||||||||
Sbjct: 11 tcaacattcattgctgtcggtgggtt 36
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggtt 45
|||| ||||||||||||||||||||||||
Sbjct: 11 caataaacattcattgctgtcggtgggtt 39
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggtt 45
|||| ||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggtt 34
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 caatcaacattcattgctgtcggtgggtt 45
|||| ||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggtt 34
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 aacattcattgctgtcggtgggtt 45
||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtt 24
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 16 acaatcaacattcattgctgtcggtgggttg 46
||||| ||||||||||| |||||||||||||
Sbjct: 1 acaattaacattcattgttgtcggtgggttg 31
>34332_dre-mir-181c:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 acattcattgctgtcggtgggtt 45
|||||||||||||||||||||||
Sbjct: 13 acattcattgctgtcggtgggtt 35
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 aacattcattgctgtcggtgggttg 46
||||||||||| |||||||||||||
Sbjct: 1 aacattcattgttgtcggtgggttg 25
