miRNEST 2.0, an integrative microRNA resource :: BLAST
>31757_mmu-let-7d:mirbase
Length = 103
Score = 192 bits (97), Expect = 4e-50
Identities = 100/101 (99%)
Strand = Plus / Plus
Query: 11 tgggttcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgggttcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 62
Query: 71 gaggtaactatacgacctgctgcctttcttagggccttatt 111
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 63 gagttaactatacgacctgctgcctttcttagggccttatt 103
>32643_rno-let-7d:mirbase
Length = 98
Score = 178 bits (90), Expect = 6e-46
Identities = 96/98 (97%)
Strand = Plus / Plus
Query: 11 tgggttcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 70
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggctcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 60
Query: 71 gaggtaactatacgacctgctgcctttcttagggcctt 108
||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 gagttaactatacgacctgctgcctttcttagggcctt 98
>33099_rno-mir-3596b:mirbase
Length = 95
Score = 172 bits (87), Expect = 4e-44
Identities = 90/91 (98%)
Strand = Plus / Minus
Query: 16 tcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggt 75
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 91 tcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtt 32
Query: 76 aactatacgacctgctgcctttcttagggcc 106
|||||||||||||||||||||||||||||||
Sbjct: 31 aactatacgacctgctgcctttcttagggcc 1
>27634_mml-let-7d:mirbase
Length = 87
Score = 165 bits (83), Expect = 9e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 17 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggta 76
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 77 actatacgacctgctgcctttcttagg 103
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>28344_hsa-let-7d:mirbase
Length = 87
Score = 165 bits (83), Expect = 9e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 17 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggta 76
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 77 actatacgacctgctgcctttcttagg 103
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>30736_ppy-let-7d:mirbase
Length = 87
Score = 165 bits (83), Expect = 9e-42
Identities = 86/87 (98%)
Strand = Plus / Plus
Query: 17 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggta 76
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60
Query: 77 actatacgacctgctgcctttcttagg 103
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>30131_ptr-let-7d:mirbase
Length = 86
Score = 163 bits (82), Expect = 4e-41
Identities = 85/86 (98%)
Strand = Plus / Plus
Query: 18 ctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggtaa 77
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggtaa 60
Query: 78 ctatacgacctgctgcctttcttagg 103
||||||||||||||||||||||||||
Sbjct: 61 ctatacgacctgctgcctttcttagg 86
>27322_mdo-let-7d:mirbase
Length = 106
Score = 159 bits (80), Expect = 6e-40
Identities = 98/104 (94%)
Strand = Plus / Plus
Query: 11 tgggttcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 70
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3 tgggctcctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaag 62
Query: 71 gaggtaactatacgacctgctgcctttcttagggccttattatt 114
||| ||||||||| ||||||||||||||||||||| |||||||
Sbjct: 63 gagttaactatacaacctgctgcctttcttagggctctattatt 106
>26932_eca-let-7d:mirbase
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 17 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggta 76
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60
Query: 77 actatacgacctgctgcctttcttagg 103
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>33113_bta-let-7d:mirbase
Length = 87
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 17 cctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggta 76
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 1 cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60
Query: 77 actatacgacctgctgcctttcttagg 103
|||||||||||||||||||||||||||
Sbjct: 61 actatacgacctgctgcctttcttagg 87
>25873_gga-let-7d:mirbase
Length = 103
Score = 153 bits (77), Expect = 3e-38
Identities = 95/101 (94%)
Strand = Plus / Plus
Query: 11 tgggttcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 70
|||| ||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||
Sbjct: 3 tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62
Query: 71 gaggtaactatacgacctgctgcctttcttagggccttatt 111
||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 63 gaggtaactatacaacctgctgcctttcttagggctttatt 103
>26382_tgu-let-7d:mirbase
Length = 92
Score = 147 bits (74), Expect = 2e-36
Identities = 86/90 (95%)
Strand = Plus / Plus
Query: 16 tcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggt 75
||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||
Sbjct: 3 tcctaggaagaggtagtaggttgcatagttttagggcagggattttgctcagaaggaggt 62
Query: 76 aactatacgacctgctgcctttcttagggc 105
|||||||| |||||||||||||||||||||
Sbjct: 63 aactatacaacctgctgcctttcttagggc 92
>31411_oan-let-7d:mirbase
Length = 116
Score = 143 bits (72), Expect = 3e-35
Identities = 96/104 (92%)
Strand = Plus / Plus
Query: 11 tgggttcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 70
|||| ||||||||||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct: 11 tgggctcctaggaagaggtagtaggttgcatagttttagggcagtgattttgctcataag 70
Query: 71 gaggtaactatacgacctgctgcctttcttagggccttattatt 114
| | ||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 71 gtgttaactatacaacctgctgcctttcttagggctttattatt 114
>26375_tgu-let-7a-1:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttagggc 52
|||||||||||||| |||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttagggc 39
>25868_gga-let-7a-1:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 14 gaggtagtaggttgtatagttttaggg 40
>25870_gga-let-7a-3:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 5 gaggtagtaggttgtatagttttaggg 31
>26377_tgu-let-7a-3:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 62 gaggtagtaggttgtatagttttaggg 88
>27318_mdo-let-7a-1:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 16 gaggtagtaggttgtatagttttaggg 42
>27629_mml-let-7a-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 7 gaggtagtaggttgtatagttttaggg 33
>28339_hsa-let-7a-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 7 gaggtagtaggttgtatagttttaggg 33
>30126_ptr-let-7a-1:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 6 gaggtagtaggttgtatagttttaggg 32
>30731_ppy-let-7a-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 7 gaggtagtaggttgtatagttttaggg 33
>31752_mmu-let-7a-1:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 14 gaggtagtaggttgtatagttttaggg 40
>32638_rno-let-7a-1:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 14 gaggtagtaggttgtatagttttaggg 40
>33108_bta-let-7a-1:mirbase
Length = 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 7 gaggtagtaggttgtatagttttaggg 33
>33899_ssc-let-7a-2:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttaggg 38
>34165_dre-let-7a-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 12 gaggtagtaggttgtatagttttaggg 38
>34526_fru-let-7a-2:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 5 gaggtagtaggttgtatagttttaggg 31
>34674_tni-let-7a-2:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttaggg 51
|||||||||||||| ||||||||||||
Sbjct: 13 gaggtagtaggttgtatagttttaggg 39
>25871_gga-let-7b:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 20 aggaagaggtagtaggttgcatagttttagggcagagattttgccc--acaaggaggtaa 77
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 2 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 61
Query: 78 ctatacgacctgctgcctt 96
|||||| |||| |||||||
Sbjct: 62 ctatacaacctactgcctt 80
>26379_tgu-let-7b:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 65/79 (82%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 20 aggaagaggtagtaggttgcatagttttagggcagagattttgccc--acaaggaggtaa 77
|||| |||||||||||||| | |||| |||| || |||||||||| | ||||| |||
Sbjct: 7 aggatgaggtagtaggttgtgtggtttcagggtagtgattttgccccaatcaggagataa 66
Query: 78 ctatacgacctgctgcctt 96
|||||| |||| |||||||
Sbjct: 67 ctatacaacctactgcctt 85
>27632_mml-let-7b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggtaactatacg 84
|||||||||||||| | |||| ||||||| ||| |||||| || || |||||||||
Sbjct: 7 gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcagaagataactataca 66
Query: 85 acctgctgcctt 96
|||| |||||||
Sbjct: 67 acctactgcctt 78
>30129_ptr-let-7b:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 4e-04
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggtaactatacg 84
|||||||||||||| | |||| ||||||| ||| |||||| || || |||||||||
Sbjct: 6 gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcagaagataactataca 65
Query: 85 acctgctgcctt 96
|||| |||||||
Sbjct: 66 acctactgcctt 77
>30734_ppy-let-7b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 25 gaggtagtaggttgcatagttttagggcagagattttgcccacaaggaggtaactatacg 84
|||||||||||||| | |||| ||||||| ||| |||||| || || |||||||||
Sbjct: 7 gaggtagtaggttgtgtggtttcagggcagtgatgttgcccctcagaagataactataca 66
Query: 85 acctgctgcctt 96
|||| |||||||
Sbjct: 67 acctactgcctt 78
