miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53461_ptc-miRf11639-akr:pmrd
Length = 110
Score = 113 bits (57), Expect = 3e-26
Identities = 81/88 (92%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacactgttcatcatgtcaattacaaaga 79
||||||| |||||||| ||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 25 attccgttggtaaatttgttggtaaattgtgaacactgttcatcatgttaattacaaagg 84
Query: 80 gaatcaccgacagaatttattccgtcgg 107
||||||||||||||| |||||||||||
Sbjct: 85 gaatcaccgacagaa--tattccgtcgg 110
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 80 gaatcaccgacagaatttattccgt 104
||||||||||| |||||||||||||
Sbjct: 28 gaatcaccgacggaatttattccgt 4
>54001_ptc-miRf12179-akr:pmrd
Length = 125
Score = 111 bits (56), Expect = 1e-25
Identities = 86/95 (90%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacactgttcatcatgtcaattacaaaga 79
|||||||||||||||| ||| |||||| |||||| |||||||||||||||||||||||
Sbjct: 32 attccgtcggtaaatttattgataaactatgaacaatgttcatcatgtcaattacaaagg 91
Query: 80 gaatcaccgacagaatttattccgtcggtattttc 114
||||||||||| ||||| ||||||||||||||||
Sbjct: 92 gaatcaccgacggaatt--ttccgtcggtattttc 124
>53800_ptc-miRf11978-akr:pmrd
Length = 102
Score = 109 bits (55), Expect = 4e-25
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacactgttcatcatgtcaattacaaaga 79
||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 14 attccgtcggtaattccatcggtaaactgtgaacactgttcatcatgtcaattacaaagg 73
Query: 80 gaatcaccgacagaatttattccgtcggta 109
||||||||||| ||||| |||||||||||
Sbjct: 74 gaatcaccgacggaatt--ttccgtcggta 101
>53235_ptc-miRf11413-akr:pmrd
Length = 100
Score = 109 bits (55), Expect = 4e-25
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacactgttcatcatgtcaattacaaaga 79
||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 13 attccgtcggtaattccatcggtaaactgtgaacactgttcatcatgtcaattacaaagg 72
Query: 80 gaatcaccgacagaatttattccgtcggta 109
||||||||||| ||||| |||||||||||
Sbjct: 73 gaatcaccgacggaatt--ttccgtcggta 100
>53233_ptc-miRf11411-akr:pmrd
Length = 102
Score = 109 bits (55), Expect = 4e-25
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacactgttcatcatgtcaattacaaaga 79
||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 14 attccgtcggtaattccatcggtaaactgtgaacactgttcatcatgtcaattacaaagg 73
Query: 80 gaatcaccgacagaatttattccgtcggta 109
||||||||||| ||||| |||||||||||
Sbjct: 74 gaatcaccgacggaatt--ttccgtcggta 101
>52746_ptc-miRf10924-akr:pmrd
Length = 112
Score = 109 bits (55), Expect = 4e-25
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacactgttcatcatgtcaattacaaaga 79
|||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 87 attccgtcggtaaatttgttggtaaattgtgaacactgttcatcatgttaattacaaagg 28
Query: 80 gaatcaccgac 90
|||||||||||
Sbjct: 27 gaatcaccgac 17
>53820_ptc-miRf11998-akr:pmrd
Length = 114
Score = 101 bits (51), Expect = 1e-22
Identities = 81/90 (90%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacactgttcatcatgtcaattacaaaga 79
|||| ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 27 attctgtcggtaaatttgttggtaaactgtgaaaactattcatcatgtcaattacaaagg 86
Query: 80 gaatcaccgacagaatttattccgtcggta 109
||||| ||||| ||||| |||||||||||
Sbjct: 87 gaatcgccgacggaatt--ttccgtcggta 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 85 accgacagaatttattccgtcggta 109
|||||| ||||||||||||||||||
Sbjct: 2 accgacggaatttattccgtcggta 26
>54034_ptc-miRf12212-akr:pmrd
Length = 101
Score = 93.7 bits (47), Expect = 3e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 21 ttccgtcggtaaattcgttggtaaactgtgaacactgttcatcatgtcaattac-aaaga 79
||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| ||||
Sbjct: 14 ttccgtcggtaaatttgttggtaaattgtgaacactgttcatcatgttaattacaaaagg 73
Query: 80 gaatcaccgac 90
|||||||||||
Sbjct: 74 gaatcaccgac 84
>54336_ptc-miRf12514-akr:pmrd
Length = 72
Score = 89.7 bits (45), Expect = 4e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaacac 55
|||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 20 aattaccgacggaatttattccgtcggtaaatttgttggtaaactgtgaacac 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcggta 109
|||| |||||| ||||||||||||||||||
Sbjct: 19 gaattaccgacggaatttattccgtcggta 48
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||| ||||||||||||| | ||||||||||
Sbjct: 49 ttaccgacggaataaattccgtcggtaattccgttggtaaa 9
>54253_ptc-miRf12431-akr:pmrd
Length = 106
Score = 89.7 bits (45), Expect = 4e-19
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 45 actgtgaacactgttcatcatgtcaattacaaagagaatcaccgacagaattt 97
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 63 actgtgaacactgttcatcatgtcaattacaaagggaatcaccgacggaattt 11
>54096_ptc-miRf12274-akr:pmrd
Length = 70
Score = 87.7 bits (44), Expect = 2e-18
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaaca 54
|||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 19 aattaccgacggaatttattccgtcggtaaatttgttggtaaactgtgaaca 70
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcggta 109
|||| |||||| ||||||||||||||||||
Sbjct: 18 gaattaccgacggaatttattccgtcggta 47
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||| ||||||||||||| | ||||||||||
Sbjct: 48 ttaccgacggaataaattccgtcggtaattccgttggtaaa 8
>53530_ptc-miRf11708-akr:pmrd
Length = 113
Score = 87.7 bits (44), Expect = 2e-18
Identities = 62/67 (92%), Gaps = 2/67 (2%)
Strand = Plus / Minus
Query: 43 aaactgtgaacactgttcatcatgtcaattacaaagagaatcaccgacagaatttattcc 102
|||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 65 aaactgtgaacattgttcatcatgtcaattacaaagggaatcaccgacggaatt--ttcc 8
Query: 103 gtcggta 109
|||||||
Sbjct: 7 gtcggta 1
>54009_ptc-miRf12187-akr:pmrd
Length = 72
Score = 73.8 bits (37), Expect = 2e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaacac 55
|||||| |||||||||| || |||||||||||| |||||||||||||||||||
Sbjct: 20 aattaccgacggaatttttttcgtcggtaaatttgttggtaaactgtgaacac 72
>53223_ptc-miRf11401-akr:pmrd
Length = 72
Score = 73.8 bits (37), Expect = 2e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaacac 55
|||||| |||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 20 aattaccgacggaataaattccatcggtaaattcgttggtaaactgtgaacac 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 13 ggaatttattccgtcggtaaattcgttggtaaa 45
|||||||||||||||||||| | ||||||||||
Sbjct: 41 ggaatttattccgtcggtaattccgttggtaaa 9
>53139_ptc-miRf11317-akr:pmrd
Length = 100
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 25 gtcggtaaattcgttggtaaactgtgaacactgttcatcat 65
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 60 gtcggtaaattcgttggtaaattgtgaacactgttcatcat 100
>52917_ptc-miRf11095-akr:pmrd
Length = 72
Score = 73.8 bits (37), Expect = 2e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaacac 55
|||||| |||||||||| || |||||||||||| |||||||||||||||||||
Sbjct: 20 aattaccgacggaatttttttcgtcggtaaatttgttggtaaactgtgaacac 72
>53909_ptc-miRf12087-akr:pmrd
Length = 72
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaaca 54
|||||| |||||||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 20 aattaccgacggaatttattccgtcggaaaaatcgttggtaaactatgaaca 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 10 gacggaatttattccgtcggtaaattcgttggtaaa 45
|||||||| ||||||||||||| | ||||||||||
Sbjct: 44 gacggaataaattccgtcggtaattccgttggtaaa 9
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcgg 107
|||| |||||| ||||||||||||||||
Sbjct: 19 gaattaccgacggaatttattccgtcgg 46
>53577_ptc-miRf11755-akr:pmrd
Length = 72
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaaca 54
|||||| |||||||||||||||||||| ||| ||||||||||||| ||||||
Sbjct: 20 aattaccgacggaatttattccgtcggaaaaatcgttggtaaactatgaaca 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 10 gacggaatttattccgtcggtaaattcgttggtaaa 45
|||||||| ||||||||||||| | ||||||||||
Sbjct: 44 gacggaataaattccgtcggtaattccgttggtaaa 9
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcgg 107
|||| |||||| ||||||||||||||||
Sbjct: 19 gaattaccgacggaatttattccgtcgg 46
>52853_ptc-miRf11031-akr:pmrd
Length = 84
Score = 67.9 bits (34), Expect = 2e-12
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 10 gacggaatttattccgtcggtaaattcgttggtaaactgtgaacac 55
|||||||||| ||||||||||||||| ||||||||| |||||||||
Sbjct: 39 gacggaatttgttccgtcggtaaatttgttggtaaattgtgaacac 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcggta 109
||||||||||| |||||| |||||||||||
Sbjct: 31 gaatcaccgacggaatttgttccgtcggta 60
>54060_ptc-miRf12238-akr:pmrd
Length = 124
Score = 65.9 bits (33), Expect = 6e-12
Identities = 60/68 (88%), Gaps = 2/68 (2%)
Strand = Plus / Plus
Query: 47 tgtgaacactgttcatcatgtcaattacaaagagaatcaccgacagaatttattccgtcg 106
|||||||||| |||||||||||||||||||| |||| |||||| ||||| |||||||
Sbjct: 59 tgtgaacactattcatcatgtcaattacaaaaggaattaccgacggaatt--gtccgtcg 116
Query: 107 gtattttc 114
||||||||
Sbjct: 117 gtattttc 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcggta 109
|||| |||||| ||||||||||||||||||
Sbjct: 2 gaattaccgacggaatttattccgtcggta 31
>53954_ptc-miRf12132-akr:pmrd
Length = 72
Score = 65.9 bits (33), Expect = 6e-12
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaacac 55
|||||| ||| |||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 20 aattaccgacagaataaatttcgtcggtaaattcgttggtaaactgtgaacac 72
>54167_ptc-miRf12345-akr:pmrd
Length = 87
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattc 36
|||||| |||||||||||||||||||||||||||
Sbjct: 21 aattaccgacggaatttattccgtcggtaaattc 54
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaact 47
|||||||| |||||||||||||||||||
Sbjct: 51 attccgtcagtaaattcgttggtaaact 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcggta 109
|||| |||||| ||||||||||||||||||
Sbjct: 20 gaattaccgacggaatttattccgtcggta 49
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||| ||||||||||||| | ||||||||||
Sbjct: 50 ttaccgacggaataaattccgtcggtaattccgttggtaaa 10
>54035_ptc-miRf12213-akr:pmrd
Length = 70
Score = 60.0 bits (30), Expect = 4e-10
Identities = 48/53 (90%), Gaps = 2/53 (3%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaacac 55
|||||| |||||||||| |||||||||||||| ||||||||| |||||||||
Sbjct: 20 aattaccgacggaattt--tccgtcggtaaatttgttggtaaattgtgaacac 70
>54108_ptc-miRf12286-akr:pmrd
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaacac 55
|||||| ||||||| |||||||||||||||| ||||||||| |||||||||
Sbjct: 20 aattaccgacggaacaaattccgtcggtaaatttgttggtaaattgtgaacac 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||||| |||||||||||| | ||||||||||
Sbjct: 49 ttaccgacggaatttgttccgtcggtaattccgttggtaaa 9
>53495_ptc-miRf11673-akr:pmrd
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaactgtgaacac 55
|||||| |||||||| | ||||||||||||| |||||||||| |||||||||
Sbjct: 20 aattaccgacggaataaaatccgtcggtaaatccgttggtaaattgtgaacac 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||| |||||||||||||||| | ||||||||||
Sbjct: 49 ttaccgacggattttattccgtcggtaattccgttggtaaa 9
>54120_ptc-miRf12298-akr:pmrd
Length = 84
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacac 55
|||||||||||||||| ||||||||| |||||||||
Sbjct: 49 attccgtcggtaaatttgttggtaaattgtgaacac 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||||| |||||||||||| | ||| ||||||
Sbjct: 22 ttaccgacggaatttgttccgtcggtaattccgtcggtaaa 62
>54059_ptc-miRf12237-akr:pmrd
Length = 96
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacac 55
|||||||||||||||| ||||||||| |||||||||
Sbjct: 61 attccgtcggtaaatttgttggtaaattgtgaacac 96
>54028_ptc-miRf12206-akr:pmrd
Length = 82
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacac 55
||||||||||||| ||||| ||||||||||||||||
Sbjct: 47 attccgtcggtaatttcgtcggtaaactgtgaacac 82
>53878_ptc-miRf12056-akr:pmrd
Length = 72
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacac 55
|||||||||||||||| ||||||||| |||||||||
Sbjct: 37 attccgtcggtaaatttgttggtaaattgtgaacac 72
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||||| |||||||||||| | ||| ||||||
Sbjct: 49 ttaccgacggaattttttccgtcggtaagtccgtcggtaaa 9
>53821_ptc-miRf11999-akr:pmrd
Length = 62
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 gaaattactgacggaatttattccgtcggtaa 32
|||||||| |||||||||||||||||||||||
Sbjct: 14 gaaattaccgacggaatttattccgtcggtaa 45
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||||| |||||||| ||||||||||||| ||||| ||||||
Sbjct: 47 aattaccgacggaataaattccgtcggtaatttcgtcggtaaa 5
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 85 accgacagaatttattccgtcggta 109
|||||| ||||||||||||||||||
Sbjct: 20 accgacggaatttattccgtcggta 44
>53664_ptc-miRf11842-akr:pmrd
Length = 84
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacac 55
|||||||||||||||| ||||||||| |||||||||
Sbjct: 49 attccgtcggtaaatttgttggtaaattgtgaacac 84
>53337_ptc-miRf11515-akr:pmrd
Length = 84
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacac 55
|||||||||||||||| ||||||||| |||||||||
Sbjct: 49 attccgtcggtaaatttgttggtaaattgtgaacac 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||||| |||||||||||| | ||| ||||||
Sbjct: 22 ttaccgacggaatttgttccgtcggtaattccgtcggtaaa 62
>54305_ptc-miRf12483-akr:pmrd
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaa 33
|||||| ||||||||||||||||||||||||
Sbjct: 23 aattaccgacggaatttattccgtcggtaaa 53
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcggta 109
|||| |||||| ||||||||||||||||||
Sbjct: 22 gaattaccgacggaatttattccgtcggta 51
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||| ||||||||||||| | ||||||||||
Sbjct: 52 ttaccgacggaataaattccgtcggtaattccgttggtaaa 12
>54024_ptc-miRf12202-akr:pmrd
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaaca 54
|||||||||||||||| ||||||||| ||||||||
Sbjct: 61 attccgtcggtaaatttgttggtaaattgtgaaca 95
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcggt 108
||||||||||| |||||| ||||||||||
Sbjct: 31 gaatcaccgacggaatttgttccgtcggt 59
>53269_ptc-miRf11447-akr:pmrd
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaa 33
|||||| ||||||||||||||||||||||||
Sbjct: 21 aattaccgacggaatttattccgtcggtaaa 51
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcggta 109
|||| |||||| ||||||||||||||||||
Sbjct: 20 gaattaccgacggaatttattccgtcggta 49
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||| ||||||||||||| | ||||||||||
Sbjct: 50 ttaccgacggaataaattccgtcggtaattccgttggtaaa 10
>53151_ptc-miRf11329-akr:pmrd
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaa 33
|||||| ||||||||||||||||||||||||
Sbjct: 21 aattaccgacggaatttattccgtcggtaaa 51
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 gaatcaccgacagaatttattccgtcggta 109
|||| |||||| ||||||||||||||||||
Sbjct: 20 gaattaccgacggaatttattccgtcggta 49
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 22 tccgtcggtaaattcgttggtaaact 47
||||||||||||| ||||||||||||
Sbjct: 53 tccgtcggtaaatccgttggtaaact 78
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||| ||||||||||||| | ||||||||||
Sbjct: 50 ttaccgacggaataaattccgtcggtaattccgttggtaaa 10
>53140_ptc-miRf11318-akr:pmrd
Length = 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 25 gtcggtaaattcgttggtaaactgtgaacac 55
||||||||||||||||||||| |||||||||
Sbjct: 52 gtcggtaaattcgttggtaaattgtgaacac 82
>52604_ptc-miRf10782-akr:pmrd
Length = 157
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 3 aattactgacggaatttattccgtcggtaaa 33
|||||| ||||||||||||||||||||||||
Sbjct: 40 aattaccgacggaatttattccgtcggtaaa 10
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gacggaatttattccgtcggtaaa 33
||||||||||||||||||||||||
Sbjct: 125 gacggaatttattccgtcggtaaa 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 80 gaatcaccgacagaatttattccgtcggta 109
|||| |||||| ||||||||||||||||||
Sbjct: 41 gaattaccgacggaatttattccgtcggta 12
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| |||||||| ||||||||||||| | ||||||||||
Sbjct: 11 ttaccgacggaataaattccgtcggtaattccgttggtaaa 51
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 85 accgacagaatttattccgtcggta 109
|||||| ||||||||||||||||||
Sbjct: 122 accgacggaatttattccgtcggta 146
>52806_ptc-miRf10984-akr:pmrd
Length = 85
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 22 tccgtcggtaaattcgttggtaaactgtgaacac 55
||||||||||||||| |||||||||| |||||||
Sbjct: 52 tccgtcggtaaattcattggtaaactatgaacac 85
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaa 33
|||||| ||||||||||||||| ||||||||
Sbjct: 20 aattaccgacggaatttattccatcggtaaa 50
>53755_ptc-miRf11933-akr:pmrd
Length = 74
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| ||||||| ||||||||||||||| | ||||||||||
Sbjct: 50 ttaccgacggaacttattccgtcggtaattccgttggtaaa 10
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaa 44
|||||| |||||||| |||||||||||||| |||||||||
Sbjct: 21 aattaccgacggaataagttccgtcggtaaatccgttggtaa 62
>53754_ptc-miRf11932-akr:pmrd
Length = 74
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| ||||||| ||||||||||||||| | ||||||||||
Sbjct: 50 ttaccgacggaacttattccgtcggtaattccgttggtaaa 10
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaa 44
|||||| |||||||| |||||||||||||| |||||||||
Sbjct: 21 aattaccgacggaataagttccgtcggtaaatccgttggtaa 62
>53214_ptc-miRf11392-akr:pmrd
Length = 75
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 5 ttactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||| ||||||| ||||||||||||||| | ||||||||||
Sbjct: 50 ttaccgacggaagttattccgtcggtaattccgttggtaaa 10
>53135_ptc-miRf11313-akr:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||||||||||||
Sbjct: 73 tattccgtcggtaaattcgttggta 97
>52924_ptc-miRf11102-akr:pmrd
Length = 78
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 23 ccgtcggtaaattcgttggtaaactgtgaacac 55
||||||||||||| ||||||||| |||||||||
Sbjct: 46 ccgtcggtaaatttgttggtaaattgtgaacac 78
>52058_ptc-miRf10236-akr:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||||||||||||
Sbjct: 71 tattccgtcggtaaattcgttggta 95
>54017_ptc-miRf12195-akr:pmrd
Length = 70
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacac 55
||||||||||||| | ||| ||||||||||||||||
Sbjct: 35 attccgtcggtaattccgtcggtaaactgtgaacac 70
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/43 (88%), Gaps = 2/43 (4%)
Strand = Plus / Minus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaaa 45
|||||| |||||||||| ||||||||||| | ||||||||||
Sbjct: 49 aattaccgacggaattt--tccgtcggtaattccgttggtaaa 9
>54168_ptc-miRf12346-akr:pmrd
Length = 146
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 ttattccgtcggtaaattcgttggta 43
||||||||||||||||| ||||||||
Sbjct: 113 ttattccgtcggtaaatccgttggta 138
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 85 accgacagaatttattccgtcggta 109
|||||||||| ||||||||||||||
Sbjct: 102 accgacagaaattattccgtcggta 126
>53365_ptc-miRf11543-akr:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 2 aaattactgacggaatttattccgtcggtaaattcgttggta 43
||||||| |||||||| | |||||||||||||| ||||||||
Sbjct: 58 aaattaccgacggaatat-ttccgtcggtaaatccgttggta 98
>53226_ptc-miRf11404-akr:pmrd
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaa 45
|||||||||||||||| |||||||||
Sbjct: 43 attccgtcggtaaatttgttggtaaa 68
>52808_ptc-miRf10986-akr:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 3 aattactgacggaatttattccgtcggtaaattcgttggtaa 44
|||||||||||| |||| |||||||| ||| ||||| |||||
Sbjct: 63 aattactgacggcatttcttccgtcgataatttcgtcggtaa 22
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaa 45
|||||||||||||||| |||||||||
Sbjct: 61 attccgtcggtaaatttgttggtaaa 86
>52705_ptc-miRf10883-akr:pmrd
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaa 45
|||||||||||||||| |||||||||
Sbjct: 43 attccgtcggtaaatttgttggtaaa 68
>52142_ptc-miRf10320-akr:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 2 aaattactgacggaatttattccgtcggtaaattcgttggta 43
||||||| |||||||| | |||||||||||||| ||||||||
Sbjct: 58 aaattaccgacggaatat-ttccgtcggtaaatccgttggta 98
>54260_ptc-miRf12438-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 74 tattccgtcggtaaatccgttggta 98
>54249_ptc-miRf12427-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 74 tattccgtcggtaaatccgttggta 98
>54012_ptc-miRf12190-akr:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 115 tattccgtcggtaaatccgttggta 139
>53917_ptc-miRf12095-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 74 tattccgtcggtaaatccgttggta 98
>53822_ptc-miRf12000-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 74 tattccgtcggtaaatccgttggta 98
>53779_ptc-miRf11957-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 114 tattccgtcggtaaatccgttggta 138
>53778_ptc-miRf11956-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 74 tattccgtcggtaaatccgttggta 98
>53769_ptc-miRf11947-akr:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 20 attccgtcggtaaattcgttggtaa 44
||||||||||||||||||| |||||
Sbjct: 45 attccgtcggtaaattcgtcggtaa 21
>53659_ptc-miRf11837-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 114 tattccgtcggtaaatccgttggta 138
>53571_ptc-miRf11749-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 74 tattccgtcggtaaatccgttggta 98
>53529_ptc-miRf11707-akr:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 115 tattccgtcggtaaatccgttggta 139
>53512_ptc-miRf11690-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 114 tattccgtcggtaaatccgttggta 138
>53329_ptc-miRf11507-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 74 tattccgtcggtaaatccgttggta 98
>53328_ptc-miRf11506-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 114 tattccgtcggtaaatccgttggta 138
>53230_ptc-miRf11408-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 114 tattccgtcggtaaatccgttggta 138
>53161_ptc-miRf11339-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 71 tattccgtcggtaaatccgttggta 95
>53160_ptc-miRf11338-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 114 tattccgtcggtaaatccgttggta 138
>53133_ptc-miRf11311-akr:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 113 tattccgtcggtaaatccgttggta 137
>52597_ptc-miRf10775-akr:pmrd
Length = 182
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 151 tattccgtcggtaaatccgttggta 175
>52416_ptc-miRf10594-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 74 tattccgtcggtaaatccgttggta 98
>52139_ptc-miRf10317-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 tattccgtcggtaaattcgttggta 43
|||||||||||||||| ||||||||
Sbjct: 74 tattccgtcggtaaatccgttggta 98
>54000_ptc-miRf12178-akr:pmrd
Length = 62
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 10 gacggaatttattccgtcggtaaattcgttggtaaa 45
|||| ||||| |||||||||||| | ||||||||||
Sbjct: 40 gacgaaatttgttccgtcggtaattccgttggtaaa 5
>53968_ptc-miRf12146-akr:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 tccgtcggtaaattcgttggtaaa 45
||||||||||||| ||||||||||
Sbjct: 21 tccgtcggtaaatccgttggtaaa 44
>53628_ptc-miRf11806-akr:pmrd
Length = 146
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 ttccgtcggtaaattcgttggtaa 44
|||||||||||||| |||||||||
Sbjct: 68 ttccgtcggtaaatccgttggtaa 91
>53477_ptc-miRf11655-akr:pmrd
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 20 attccgtcggtaaattcgttggtaaactgtgaacac 55
||||| ||||||| | ||| ||||||||||||||||
Sbjct: 48 attccctcggtaattccgtcggtaaactgtgaacac 83
>53128_ptc-miRf11306-akr:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 22 tccgtcggtaaattcgttggtaaa 45
||||||||||||| ||||||||||
Sbjct: 125 tccgtcggtaaatccgttggtaaa 102
>51929_ptc-miRf10107-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 21 ttccgtcggtaaattcgttggtaa 44
|||||||||| |||||||||||||
Sbjct: 24 ttccgtcggtgaattcgttggtaa 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 tttattccgtcggtaaattcgttggtaa 44
|||| ||||||||||||| |||||||||
Sbjct: 57 tttagtccgtcggtaaatccgttggtaa 84
>51866_ptc-miRf10044-akr:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Minus
Query: 82 atcaccgacagaatttattccgtcggtatttt 113
||||||||| ||||| ||||||||||||||||
Sbjct: 107 atcaccgacggaatt-attccgtcggtatttt 77
