miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52513_ptc-miRf10691-akr:pmrd
Length = 128
Score = 54.0 bits (27), Expect = 3e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 37 gacttgacaatcatccaagtccaagataatatgagtttggcaaacatgccagacc 91
|||||||| ||| ||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 21 gacttgactgtcagccaagtccaagataacgtgagtttgacaaacatgtcagacc 75
>52961_ptc-miRf11139-akr:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 81 catgccagacccaagacattaggacttggcagc 113
|||||||||||||||||| | ||||||||||||
Sbjct: 85 catgccagacccaagacacttggacttggcagc 53
>53889_ptc-miRf12067-akr:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 77 caaacatgccagacccaagacattaggacttgg 109
|||||||| ||||||||||||| | ||||||||
Sbjct: 103 caaacatgtcagacccaagacacttggacttgg 135
>51994_ptc-miRf10172-akr:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 77 caaacatgccagacccaagacattaggacttgg 109
|||||||| ||||||||||||| | ||||||||
Sbjct: 42 caaacatgtcagacccaagacacttggacttgg 10
>51993_ptc-miRf10171-akr:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 77 caaacatgccagacccaagacattaggacttgg 109
|||||||| ||||||||||||| | ||||||||
Sbjct: 36 caaacatgtcagacccaagacacttggacttgg 4
