miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>52029_ptc-miRf10207-akr:pmrd
          Length = 122

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 1   gttctagggggaggagaatagttcccttcgcctc 34
           ||||||||||||||||||||||||||||||||||
Sbjct: 89  gttctagggggaggagaatagttcccttcgcctc 122



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 51/57 (89%), Gaps = 1/57 (1%)
 Strand = Plus / Plus

                                                                    
Query: 72  atcggtgttatgcataatgaatagttc-cgggggaggggaacaattcccttcgcctc 127
           |||||||||||||||| ||||||||||  |||||||| ||| | |||||||||||||
Sbjct: 66  atcggtgttatgcatagtgaatagttctagggggaggagaatagttcccttcgcctc 122




>52960_ptc-miRf11138-akr:pmrd
          Length = 122

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 100 gggggaggggaacaattcccttcgcctctagaat 133
           |||||||||||||||||||| |||||||||||||
Sbjct: 122 gggggaggggaacaattcccctcgcctctagaat 89



 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 7   gggggaggagaatagttcccttcgcctctagaatacaccgacggacac 54
           |||||||| ||| | ||||| |||||||||||||||||||| ||||||
Sbjct: 122 gggggaggggaacaattcccctcgcctctagaatacaccgatggacac 75




>52034_ptc-miRf10212-akr:pmrd
          Length = 107

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                      
Query: 20 agttcccttcgcctctagaatacaccga 47
          ||||||||||||||||||||||||||||
Sbjct: 42 agttcccttcgcctctagaatacaccga 15



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 109 gaacaattcccttcgcctctagaat 133
           ||||| |||||||||||||||||||
Sbjct: 46  gaacagttcccttcgcctctagaat 22