miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53194_ptc-miRf11372-akr:pmrd
Length = 104
Score = 206 bits (104), Expect = 2e-54
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 1 ctggtttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggtttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacgga 60
Query: 61 tttcattgctatcaccgacggaattaatccgtcggtaaaactgg 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcattgctatcaccgacggaattaatccgtcggtaaaactgg 104
>53345_ptc-miRf11523-akr:pmrd
Length = 104
Score = 182 bits (92), Expect = 3e-47
Identities = 101/104 (97%)
Strand = Plus / Plus
Query: 1 ctggtttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacgga 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggtttaccgacggaacacttccgtcggtgaatccgtcggtattggtttcaccgacgga 60
Query: 61 tttcattgctatcaccgacggaattaatccgtcggtaaaactgg 104
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcattgctatcaccgacggaattaatccgtcggtaaaactgg 104
>54061_ptc-miRf12239-akr:pmrd
Length = 104
Score = 151 bits (76), Expect = 1e-37
Identities = 97/104 (93%)
Strand = Plus / Plus
Query: 1 ctggtttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacgga 60
|||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctggtttaccgacggagcacttccgtcggtgaatccgtcggtattgttttcaccgacgga 60
Query: 61 tttcattgctatcaccgacggaattaatccgtcggtaaaactgg 104
|||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 61 tttcattgctttcaccgatggaattaatccgtcggtaaaactgg 104
>54297_ptc-miRf12475-akr:pmrd
Length = 104
Score = 143 bits (72), Expect = 3e-35
Identities = 96/104 (92%)
Strand = Plus / Plus
Query: 1 ctggtttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacgga 60
|||||| ||||||||| | |||||||||||| |||||||||||| |||||||||||||
Sbjct: 1 ctggttgaccgacggagcacttccgtcggtgaagccgtcggtattgttttcaccgacgga 60
Query: 61 tttcattgctatcaccgacggaattaatccgtcggtaaaactgg 104
|||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 tttcattgctgtcaccgacggaattaatccgtcggtaaaactgg 104
>53882_ptc-miRf12060-akr:pmrd
Length = 104
Score = 143 bits (72), Expect = 3e-35
Identities = 96/104 (92%)
Strand = Plus / Plus
Query: 1 ctggtttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacgga 60
|||||| ||||||||| | |||||||||||| |||||||||||| |||||||||||||
Sbjct: 1 ctggttgaccgacggagcacttccgtcggtgaagccgtcggtattgttttcaccgacgga 60
Query: 61 tttcattgctatcaccgacggaattaatccgtcggtaaaactgg 104
|||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 tttcattgctgtcaccgacggaattaatccgtcggtaaaactgg 104
>53681_ptc-miRf11859-akr:pmrd
Length = 99
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Plus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 20 tccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctatcaccgacgg 79
Query: 82 aattaatccgtcggtaaaac 101
||||||||||||||||||||
Sbjct: 80 aattaatccgtcggtaaaac 99
>53270_ptc-miRf11448-akr:pmrd
Length = 99
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 80 tccgtcggtgaatccgtcggtattgttttcaccgacggagttcattgctatcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
>53106_ptc-miRf11284-akr:pmrd
Length = 104
Score = 143 bits (72), Expect = 3e-35
Identities = 96/104 (92%)
Strand = Plus / Plus
Query: 1 ctggtttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacgga 60
|||||||||||||||| | ||||||||||||||||||||||||| |||||||||| ||
Sbjct: 1 ctggtttaccgacggatcacttccgtcggtgaatccgtcggtattgttttcaccgacaga 60
Query: 61 tttcattgctatcaccgacggaattaatccgtcggtaaaactgg 104
|||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 61 tttcattgctgtcaccgacggaattaatccgtcagtaaaactgg 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 72 tcaccgacggaattaatccgtcggtaaa 99
|||||||||||| | |||||||||||||
Sbjct: 32 tcaccgacggaagtgatccgtcggtaaa 5
>52114_ptc-miRf10292-akr:pmrd
Length = 99
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 80 tccgtcggtgaatccgtcggtattgttttcaccgacggagttcattgctatcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
>54335_ptc-miRf12513-akr:pmrd
Length = 99
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 20 tccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 79
Query: 82 aattaatccgtcggtaaaac 101
||||||||||||||||||||
Sbjct: 80 aattaatccgtcggtaaaac 99
>53526_ptc-miRf11704-akr:pmrd
Length = 98
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
|||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 80 tccgtcggtgaagccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
>53027_ptc-miRf11205-akr:pmrd
Length = 98
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
|||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 80 tccgtcggtgaagccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
>52858_ptc-miRf11036-akr:pmrd
Length = 99
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 20 tccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 79
Query: 82 aattaatccgtcggtaaaac 101
||||||||||||||||||||
Sbjct: 80 aattaatccgtcggtaaaac 99
>52831_ptc-miRf11009-akr:pmrd
Length = 105
Score = 135 bits (68), Expect = 7e-33
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 5 tttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatttc 64
|||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6 tttaccgacggatcacttccgtcggtgaatccgtcggtattgttttcaccgacggattta 65
Query: 65 attgctatcaccgacggaattaatccgtcggtaaaactgg 104
|||| | |||||||||||||||||||||||||||||||||
Sbjct: 66 attgttgtcaccgacggaattaatccgtcggtaaaactgg 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 72 tcaccgacggaattaatccgtcggtaaa 99
|||||||||||| | |||||||||||||
Sbjct: 33 tcaccgacggaagtgatccgtcggtaaa 6
>53438_ptc-miRf11616-akr:pmrd
Length = 99
Score = 129 bits (65), Expect = 4e-31
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 5 tttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatttc 64
|||||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 3 tttaccgacggatcacgtccgtcggtgaatccgtcggtattgttttcaccgacggagtta 62
Query: 65 attgctatcaccgacggaattaatccgtcggtaaaac 101
|||||||||||||||||||| || |||||||||||||
Sbjct: 63 attgctatcaccgacggaatgaacccgtcggtaaaac 99
>53326_ptc-miRf11504-akr:pmrd
Length = 93
Score = 129 bits (65), Expect = 4e-31
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
|||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 17 tccgtcggtgaagccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 76
Query: 82 aattaatccgtcggtaa 98
|||||||||||||||||
Sbjct: 77 aattaatccgtcggtaa 93
>53487_ptc-miRf11665-akr:pmrd
Length = 99
Score = 125 bits (63), Expect = 7e-30
Identities = 87/95 (91%)
Strand = Plus / Plus
Query: 7 taccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatttcat 66
||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 5 taccgacggaatggttccgtcggtgagtccgtcggtattattttcaccgacggatttcat 64
Query: 67 tgctatcaccgacggaattaatccgtcggtaaaac 101
|||| ||||||||||||| ||||||||||||||||
Sbjct: 65 tgctgtcaccgacggaatgaatccgtcggtaaaac 99
>52619_ptc-miRf10797-akr:pmrd
Length = 99
Score = 125 bits (63), Expect = 7e-30
Identities = 87/95 (91%)
Strand = Plus / Minus
Query: 7 taccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatttcat 66
||||||||||| | ||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 95 taccgacggaatggttccgtcggtgagtccgtcggtattattttcaccgacggatttcat 36
Query: 67 tgctatcaccgacggaattaatccgtcggtaaaac 101
|||| ||||||||||||| ||||||||||||||||
Sbjct: 35 tgctgtcaccgacggaatgaatccgtcggtaaaac 1
>51848_ptc-miRf10026-akr:pmrd
Length = 99
Score = 125 bits (63), Expect = 7e-30
Identities = 90/99 (90%)
Strand = Plus / Minus
Query: 3 ggtttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatt 62
|||| ||||||||| || |||||||||||| ||||||||||| |||||||||||||||
Sbjct: 99 ggttcaccgacggatagattccgtcggtgaagccgtcggtatttctttcaccgacggatt 40
Query: 63 tcattgctatcaccgacggaattaatccgtcggtaaaac 101
|||| ||||||||| ||||||||||||||||||||||||
Sbjct: 39 tcatggctatcaccaacggaattaatccgtcggtaaaac 1
>53918_ptc-miRf12096-akr:pmrd
Length = 99
Score = 121 bits (61), Expect = 1e-28
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 5 tttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatttc 64
|||||||||||| | ||||||||||| || |||||||||| ||||||| |||||||||
Sbjct: 3 tttaccgacggatcacttccgtcggtgagtctgtcggtattgttttcaccaacggatttc 62
Query: 65 attgctatcaccgacggaattaatccgtcggtaaaac 101
|||||| ||||||||||||||||||||||||||||||
Sbjct: 63 attgctgtcaccgacggaattaatccgtcggtaaaac 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 72 tcaccgacggaattaatccgtcggtaaaac 101
|||||||||||| | |||||||||||||||
Sbjct: 30 tcaccgacggaagtgatccgtcggtaaaac 1
>52376_ptc-miRf10554-akr:pmrd
Length = 99
Score = 119 bits (60), Expect = 4e-28
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||| ||||| ||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 80 tccgttggtgagtccgtcgatattgttttcaccgacggatttcattgctgtcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
>52088_ptc-miRf10266-akr:pmrd
Length = 99
Score = 117 bits (59), Expect = 2e-27
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 3 ggtttaccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatt 62
|||| ||||||||| || |||||||||||| ||||||||||| |||||||||||||||
Sbjct: 99 ggttcaccgacggatagattccgtcggtgaagccgtcggtatttctttcaccgacggatt 40
Query: 63 tcattgctatcaccgacggaattaatccgtcggtaaaac 101
|||| ||||||||||||||||||||||||||||||||
Sbjct: 39 tcatgtttatcaccgacggaattaatccgtcggtaaaac 1
>52229_ptc-miRf10407-akr:pmrd
Length = 95
Score = 111 bits (56), Expect = 1e-25
Identities = 83/92 (90%)
Strand = Plus / Minus
Query: 8 accgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatttcatt 67
||||||||| || |||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 92 accgacggatagattccgtcggtgaagccgtcggtatttctttcaccgacggatttcatg 33
Query: 68 gctatcaccgacggaattaatccgtcggtaaa 99
|||||||||||||||||||| ||||||||||
Sbjct: 32 gctatcaccgacggaattaagtcgtcggtaaa 1
>53620_ptc-miRf11798-akr:pmrd
Length = 98
Score = 109 bits (55), Expect = 4e-25
Identities = 86/95 (90%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 7 taccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatttcat 66
|||||||||| | |||||||||||| || |||||||| | |||||||||||||||||||
Sbjct: 5 taccgacggatcacgtccgtcggtgattctgtcggtatggttttcaccgacggatttcat 64
Query: 67 tgctatcaccgacggaattaatccgtcggtaaaac 101
|||| ||||| ||||||||||||||||||||||||
Sbjct: 65 tgctgtcacc-acggaattaatccgtcggtaaaac 98
>52517_ptc-miRf10695-akr:pmrd
Length = 104
Score = 109 bits (55), Expect = 4e-25
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
|||||| |||| ||||||||||| |||||||||||||||| ||||||| ||||||||||
Sbjct: 22 tccgtctgtgatgccgtcggtatttgtttcaccgacggattgcattgctgtcaccgacgg 81
Query: 82 aattaatccgtcggtaaaactgg 104
||||| |||||||||||||||||
Sbjct: 82 aattagtccgtcggtaaaactgg 104
>54104_ptc-miRf12282-akr:pmrd
Length = 99
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
|||||| |||| ||| || |||||| ||||||||||||||| ||||||| ||||||||||
Sbjct: 80 tccgtcagtgagtccatctgtattgttttcaccgacggattgcattgctgtcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
>53254_ptc-miRf11432-akr:pmrd
Length = 98
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
|||||| |||| ||||||||||| |||||||||||||||| ||||||| ||||||||||
Sbjct: 80 tccgtctgtgatgccgtcggtatttgtttcaccgacggattgcattgctgtcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||| ||||||||||||||
Sbjct: 20 aattagtccgtcggtaaaac 1
>52673_ptc-miRf10851-akr:pmrd
Length = 99
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
|||||||| || |||||||||||| ||| ||||||||||||||||||| ||||||||||
Sbjct: 80 tccgtcggcgagtccgtcggtattatttttaccgacggatttcattgctgtcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||| ||||||||||||||
Sbjct: 20 aattagtccgtcggtaaaac 1
>52637_ptc-miRf10815-akr:pmrd
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 34 tccgtcggtattggtttcaccgacggatttcattgctatcaccgacggaattaatccgtc 93
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 68 tccgtcggtatgtttttcaccgacggatttcattgctgtcaccgacggaattaatccgtc 9
Query: 94 ggtaaaac 101
||||||||
Sbjct: 8 ggtaaaac 1
>52325_ptc-miRf10503-akr:pmrd
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 34 tccgtcggtattggtttcaccgacggatttcattgctatcaccgacggaattaatccgtc 93
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 68 tccgtcggtatgattttcaccgacggatttcattgctgtcaccgacggaattaatccgtc 9
Query: 94 ggtaaaac 101
||||||||
Sbjct: 8 ggtaaaac 1
>52264_ptc-miRf10442-akr:pmrd
Length = 99
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||||| | | ||||||||||| ||| |||||||||||||| |||| ||||||||||
Sbjct: 80 tccgtcggtaatttcgtcggtattgtttttaccgacggatttcaatgctgtcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
>53644_ptc-miRf11822-akr:pmrd
Length = 91
Score = 101 bits (51), Expect = 1e-22
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 7 taccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatttcat 66
|||||||||||| | ||||||||||| ||||||||||| ||||||||||||||| |||
Sbjct: 1 taccgacggaaccattccgtcggtgagtccgtcggtatgattttcaccgacggattgcat 60
Query: 67 tgctatcaccgacggaattaatccgtcggta 97
|||| ||||||||||||| | ||||||||||
Sbjct: 61 tgctttcaccgacggaatgagtccgtcggta 91
>53602_ptc-miRf11780-akr:pmrd
Length = 100
Score = 101 bits (51), Expect = 1e-22
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 24 cgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacggaa 83
||||||||| ||||||||| || |||||||||||||||||||| || ||||||||||||
Sbjct: 79 cgtcggtgaggccgtcggtaatgatttcaccgacggatttcattcctgtcaccgacggaa 20
Query: 84 ttaatccgtcggtaaaact 102
||| |||||||||||||||
Sbjct: 19 ttagtccgtcggtaaaact 1
>52732_ptc-miRf10910-akr:pmrd
Length = 91
Score = 101 bits (51), Expect = 1e-22
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 7 taccgacggaacgagtccgtcggtgaatccgtcggtattggtttcaccgacggatttcat 66
|||||||||||| | ||||||||||| ||||||||||| ||||||||||||||| |||
Sbjct: 1 taccgacggaaccattccgtcggtgagtccgtcggtatgattttcaccgacggattgcat 60
Query: 67 tgctatcaccgacggaattaatccgtcggta 97
|||| ||||||||||||| | ||||||||||
Sbjct: 61 tgctttcaccgacggaatgagtccgtcggta 91
>52912_ptc-miRf11090-akr:pmrd
Length = 99
Score = 95.6 bits (48), Expect = 6e-21
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||||||| ||||| |||||| |||||||||||||||||||| || ||||||||||
Sbjct: 80 tccgtcggtgattccgttggtattattttcaccgacggatttcattactgtcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||| | ||||||||||||||
Sbjct: 20 aatgattccgtcggtaaaac 1
>52483_ptc-miRf10661-akr:pmrd
Length = 99
Score = 89.7 bits (45), Expect = 4e-19
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 25 gtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacggaat 84
|||||||| ||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 77 gtcggtgagtccgtcggtatgattttcaccgacggatttcattgctgtcaccgacagaat 18
Query: 85 taatccgtcggtaaaac 101
| ||||||||||||||
Sbjct: 17 gagtccgtcggtaaaac 1
>53168_ptc-miRf11346-akr:pmrd
Length = 98
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/80 (88%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||| ||| ||||||||| | |||||||||||||||||||| |||||||||||||
Sbjct: 80 tccgtcgatgaggccgtcggtaattatttcaccgacggatttcattcctatcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||| || |||||||||||
Sbjct: 20 aattagtctgtcggtaaaac 1
>52330_ptc-miRf10508-akr:pmrd
Length = 87
Score = 87.7 bits (44), Expect = 1e-18
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 34 tccgtcggtattggtttcaccgacggatttcattgctatcaccgacggaattaatccgtc 93
|||||||||||| |||||||||||||| |||||||| ||||||||||||| | ||||||
Sbjct: 68 tccgtcggtattattttcaccgacggatgtcattgctgtcaccgacggaatgagtccgtc 9
Query: 94 ggtaaaac 101
||||||||
Sbjct: 8 ggtaaaac 1
>52255_ptc-miRf10433-akr:pmrd
Length = 104
Score = 85.7 bits (43), Expect = 6e-18
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||| ||||| ||||||||| | ||||||||||||||||||||| | ||||||||||
Sbjct: 22 tccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacgg 81
Query: 82 aattaatccgtcggtaaaactgg 104
||||| |||||||||||| ||||
Sbjct: 82 aattagtccgtcggtaaagctgg 104
>52480_ptc-miRf10658-akr:pmrd
Length = 107
Score = 79.8 bits (40), Expect = 4e-16
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 48 tttcaccgacggatttcattgctatcaccgacggaattaatccgtcggtaaaactg 103
||||||||||||| |||||| || ||||||||||||||| ||||||||||||||||
Sbjct: 50 tttcaccgacggagttcattcctgtcaccgacggaattagtccgtcggtaaaactg 105
>52071_ptc-miRf10249-akr:pmrd
Length = 105
Score = 79.8 bits (40), Expect = 4e-16
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 48 tttcaccgacggatttcattgctatcaccgacggaattaatccgtcggtaaaactg 103
||||||||||||| |||||| || ||||||||||||||| ||||||||||||||||
Sbjct: 57 tttcaccgacggagttcattcctgtcaccgacggaattagtccgtcggtaaaactg 2
>53349_ptc-miRf11527-akr:pmrd
Length = 105
Score = 75.8 bits (38), Expect = 6e-15
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
|||||||||||| || |||||| | ||||||||| ||| |||||| || |||| |||||
Sbjct: 83 tccgtcggtgaagccatcggtaattatttcaccgatggagttcattcctgtcactgacgg 24
Query: 82 aattaatccgtcggtaaaactg 103
||||| ||||||||||||||||
Sbjct: 23 aattagtccgtcggtaaaactg 2
>52166_ptc-miRf10344-akr:pmrd
Length = 99
Score = 71.9 bits (36), Expect = 9e-14
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||| ||| ||||||||| | ||||||||||||| |||||| || ||||||||||
Sbjct: 80 tccgtcgatgaggccgtcggtaattatttcaccgacggagttcattcctgtcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||||| ||||||| ||||||
Sbjct: 20 aattagtccgtcgataaaac 1
>54224_ptc-miRf12402-akr:pmrd
Length = 105
Score = 67.9 bits (34), Expect = 1e-12
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||||||| ||||||||| ||||||||||||| |||||| || ||||||| ||
Sbjct: 83 tccgtcggtgaggccgtcggtaaatatttcaccgacggagttcattcctgtcaccgatgg 24
Query: 82 aattaatccgtcggtaaaactg 103
||| | ||||||||||||||||
Sbjct: 23 aatgagtccgtcggtaaaactg 2
>53887_ptc-miRf12065-akr:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||||||| ||||||||| | ||| ||||||||| |||| || ||||||||||
Sbjct: 82 tccgtcggtgagaccgtcggtaataattttaccgacggaggtcatgcctttcaccgacgg 23
Query: 82 aattaatccgtcggtaaaact 102
||||| |||||||||||||||
Sbjct: 22 aattagtccgtcggtaaaact 2
>53422_ptc-miRf11600-akr:pmrd
Length = 91
Score = 65.9 bits (33), Expect = 5e-12
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||| ||| ||||||||| | ||||||||||||| |||||| || ||||||||||
Sbjct: 76 tccgtcgatgaggccgtcggtaattatttcaccgacggagttcattcctgtcaccgacgg 17
Query: 82 aattaatccgtcg 94
||||| |||||||
Sbjct: 16 aattagtccgtcg 4
>52197_ptc-miRf10375-akr:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 5e-12
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 52 accgacggatttcattgctatcaccgacggaattaatccgtcggtaaaa 100
||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 51 accgacggatttcatgccttacaccgacggaattaatccgtcggtaaaa 99
>52567_ptc-miRf10745-akr:pmrd
Length = 99
Score = 63.9 bits (32), Expect = 2e-11
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||||||| || |||||| | |||||||||| || || ||| |||||||||||||
Sbjct: 80 tccgtcggtgaggccatcggtaattatttcaccgacagagttgatttctatcaccgacgg 21
Query: 82 aattaatccgtcggtaaaac 101
||| | ||||||||||||||
Sbjct: 20 aatgagtccgtcggtaaaac 1
>54311_ptc-miRf12489-akr:pmrd
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 25 gtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacggaat 84
|||||||| ||||||||| | ||||||||| ||| ||| || || ||||||||||||
Sbjct: 78 gtcggtgaggccgtcggtaattatttcaccgatggagttcgttcctgtcaccgacggaag 19
Query: 85 taatccgtcggtaaaact 102
|| |||||||||||||||
Sbjct: 18 tagtccgtcggtaaaact 1
>54178_ptc-miRf12356-akr:pmrd
Length = 99
Score = 60.0 bits (30), Expect = 3e-10
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 48 tttcaccgacggatttcattgctatcaccgacggaattaatccgtcggtaaaac 101
||||||||||||| |||||| || |||||||| |||||| ||| ||||||||||
Sbjct: 54 tttcaccgacggagttcattcctgtcaccgacagaattagtccatcggtaaaac 1
>53201_ptc-miRf11379-akr:pmrd
Length = 105
Score = 60.0 bits (30), Expect = 3e-10
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||| ||||| ||||||||| | |||||||||| | | |||| || ||||||||||
Sbjct: 83 tccgttggtgaggccgtcggtaattatttcaccgacaaagtgcattcctgtcaccgacgg 24
Query: 82 aattaatccgtcggtaaaactg 103
||||| ||||||||||||||||
Sbjct: 23 aattagtccgtcggtaaaactg 2
>52296_ptc-miRf10474-akr:pmrd
Length = 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 73 caccgacggaattaatccgtcggtaaaact 102
||||||||||||||||||||||||||||||
Sbjct: 30 caccgacggaattaatccgtcggtaaaact 1
>52130_ptc-miRf10308-akr:pmrd
Length = 108
Score = 54.0 bits (27), Expect = 2e-08
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
||||||| |||| ||||||| | | |||| || ||||| ||||| ||||||||||| |
Sbjct: 83 tccgtcgatgaaaccgtcgggaataatttctccaacggagttcatgcctatcaccgacag 24
Query: 82 aattaatccgtcggtaaaa 100
||||| |||||||||||||
Sbjct: 23 aattagtccgtcggtaaaa 5
>51991_ptc-miRf10169-akr:pmrd
Length = 99
Score = 52.0 bits (26), Expect = 8e-08
Identities = 47/54 (87%)
Strand = Plus / Minus
Query: 48 tttcaccgacggatttcattgctatcaccgacggaattaatccgtcggtaaaac 101
||||||||||||| ||||| || | |||||| |||||| ||||||||||||||
Sbjct: 54 tttcaccgacggagttcatgcctgttaccgacagaattagtccgtcggtaaaac 1
>52644_ptc-miRf10822-akr:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 7 taccgacggaacgagtccgtcggtgaatccgtcggta 43
||||||||||||| |||||||||||| ||| ||||||
Sbjct: 53 taccgacggaacgtgtccgtcggtgattccatcggta 17
>52553_ptc-miRf10731-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 71 atcaccgacggaattaatccgtcggta 97
|||||||||||||||| ||||||||||
Sbjct: 102 atcaccgacggaattattccgtcggta 76
>51866_ptc-miRf10044-akr:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 71 atcaccgacggaattaatccgtcggta 97
|||||||||||||||| ||||||||||
Sbjct: 107 atcaccgacggaattattccgtcggta 81
>53978_ptc-miRf12156-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 73 caccgacggaattaatccgtcggtaaaact 102
||||||||||||| |||||||||||||||
Sbjct: 72 caccgacggaatttgtccgtcggtaaaact 101
>52674_ptc-miRf10852-akr:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 73 caccgacggaattaatccgtcggtaaaact 102
||||||||||||| |||||||||||||||
Sbjct: 31 caccgacggaatttttccgtcggtaaaact 2
>52594_ptc-miRf10772-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 73 caccgacggaattaatccgtcggtaaaact 102
||||||||||||| |||||||||||||||
Sbjct: 72 caccgacggaatttgtccgtcggtaaaact 101
>52463_ptc-miRf10641-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 73 caccgacggaattaatccgtcggtaaaact 102
||||||||||||| |||||||||||||||
Sbjct: 72 caccgacggaatttgtccgtcggtaaaact 101
>52442_ptc-miRf10620-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 73 caccgacggaattaatccgtcggtaaaact 102
||||||||||||| |||||||||||||||
Sbjct: 72 caccgacggaattgttccgtcggtaaaact 101
>52251_ptc-miRf10429-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 73 caccgacggaattaatccgtcggtaaaact 102
||||||||||||| |||||||||||||||
Sbjct: 74 caccgacggaatttttccgtcggtaaaact 103
>52092_ptc-miRf10270-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 73 caccgacggaattaatccgtcggtaaaact 102
||||||||||||| |||||||||||||||
Sbjct: 72 caccgacggaatttttccgtcggtaaaact 101
>51874_ptc-miRf10052-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 73 caccgacggaattaatccgtcggtaaaact 102
||||||||||||| |||||||||||||||
Sbjct: 72 caccgacggaatttttccgtcggtaaaact 101
>54079_ptc-miRf12257-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 74 accgacggaattaatccgtcg 94
|||||||||||||||||||||
Sbjct: 91 accgacggaattaatccgtcg 71
>53679_ptc-miRf11857-akr:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 73 caccgacggaattaatccgtcggta 97
|||||||||||||| ||||||||||
Sbjct: 1 caccgacggaattattccgtcggta 25
>53220_ptc-miRf11398-akr:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 74 accgacggaattaatccgtcggtaa 98
||||||||||||| |||||||||||
Sbjct: 102 accgacggaattattccgtcggtaa 78
>52595_ptc-miRf10773-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 73 caccgacggaattaatccgtcggtaaaac 101
||||||| |||||||||||||| ||||||
Sbjct: 29 caccgacagaattaatccgtcgataaaac 1
>52326_ptc-miRf10504-akr:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 74 accgacggaattaatccgtcg 94
|||||||||||||||||||||
Sbjct: 131 accgacggaattaatccgtcg 111
>52258_ptc-miRf10436-akr:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 77 gacggaattaatccgtcggta 97
|||||||||||||||||||||
Sbjct: 80 gacggaattaatccgtcggta 60
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 74 accgacggaattaatccgtcg 94
|||||||||||||||||||||
Sbjct: 141 accgacggaattaatccgtcg 121
>54293_ptc-miRf12471-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 accgacggaattaatccgtcggta 97
||||||||||| ||||||||||||
Sbjct: 45 accgacggaataaatccgtcggta 68
>54196_ptc-miRf12374-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 accgacggaattaatccgtcggta 97
||||||||||||| ||||||||||
Sbjct: 9 accgacggaattattccgtcggta 32
>53325_ptc-miRf11503-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 accgacggaattaatccgtcggta 97
||||||||||||| ||||||||||
Sbjct: 9 accgacggaattattccgtcggta 32
>52853_ptc-miRf11031-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 5 tttaccgacggaacgagt-ccgtcggtgaatccgtcggta 43
|||||||||||||| | | |||||||||| ||||||||||
Sbjct: 62 tttaccgacggaacaaattccgtcggtgattccgtcggta 23
>52542_ptc-miRf10720-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 74 accgacggaattaatccgtcggta 97
||||||||||||| ||||||||||
Sbjct: 101 accgacggaattattccgtcggta 78
>52492_ptc-miRf10670-akr:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 74 accgacggaattaatccgtcggta 97
||||||||||||| ||||||||||
Sbjct: 98 accgacggaattagtccgtcggta 75
>52164_ptc-miRf10342-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 74 accgacggaattaatccgtcggta 97
||||||||||||| ||||||||||
Sbjct: 101 accgacggaattattccgtcggta 78
