miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>52127_ptc-miRf10305-akr:pmrd
          Length = 108

 Score =  214 bits (108), Expect = 1e-56
 Identities = 108/108 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcaaccacaccagacccaaacagcttggatctggcaactatttcaagcccaagcgtcata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gcaaccacaccagacccaaacagcttggatctggcaactatttcaagcccaagcgtcata 60

                                                           
Query: 61  ggtctggaacgactccatacccaagctgcttgggtctggcgtggttgt 108
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggtctggaacgactccatacccaagctgcttgggtctggcgtggttgt 108




>54099_ptc-miRf12277-akr:pmrd
          Length = 106

 Score =  210 bits (106), Expect = 2e-55
 Identities = 106/106 (100%)
 Strand = Plus / Minus

                                                                       
Query: 2   caaccacaccagacccaaacagcttggatctggcaactatttcaagcccaagcgtcatag 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 caaccacaccagacccaaacagcttggatctggcaactatttcaagcccaagcgtcatag 47

                                                         
Query: 62  gtctggaacgactccatacccaagctgcttgggtctggcgtggttg 107
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  gtctggaacgactccatacccaagctgcttgggtctggcgtggttg 1