miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 115 bits (58), Expect = 4e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 4 cttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggttt 63
Query: 61 aataac 66
||||||
Sbjct: 64 aataac 69
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 111 bits (56), Expect = 6e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||
Sbjct: 7 cttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgagttt 66
Query: 61 aataacag 68
||||||||
Sbjct: 67 aataacag 74
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 111 bits (56), Expect = 6e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||
Sbjct: 4 cttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccgggttt 63
Query: 61 aataacag 68
||||||||
Sbjct: 64 aataacag 71
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggtttaat 63
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 60
Query: 64 aa 65
||
Sbjct: 61 aa 62
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggtttaat 63
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 60
Query: 64 aa 65
||
Sbjct: 61 aa 62
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 103 bits (52), Expect = 1e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
||||||||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||
Sbjct: 5 cttttattaaacccggaccggtccagccaccgggtcgacccgccggaccgggccgagttt 64
Query: 61 aataacag 68
||||||||
Sbjct: 65 aataacag 72
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 103 bits (52), Expect = 1e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
||||||||||||||||||||||| | ||||||| |||||| |||||||||||||||||||
Sbjct: 68 cttttattaaacccggaccggtccaaccaccgggtcgacctgccgggccgggccgggttt 9
Query: 61 aataacag 68
||||||||
Sbjct: 8 aataacag 1
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 101 bits (51), Expect = 6e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 7 ttaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggtttaataa 65
||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaataa 62
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 101 bits (51), Expect = 6e-23
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
||||||||||||||||||||||| ||||||||| |||||| || ||||||||||||||||
Sbjct: 72 cttttattaaacccggaccggtccagccaccgggtcgacctgctgggccgggccgggttt 13
Query: 61 aataaca 67
|||||||
Sbjct: 12 aataaca 6
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 97.6 bits (49), Expect = 9e-22
Identities = 66/71 (92%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccg---ccgggccgggccggg 57
||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagctaccggatcgaccgggttccgggccgggccggg 60
Query: 58 tttaataacag 68
|||||||||||
Sbjct: 61 tttaataacag 71
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 97.6 bits (49), Expect = 9e-22
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 68 cttttattaaacccggaccggtccagccaccgggtcgacttgccgggccgggccgggttt 9
Query: 61 aataa 65
|||||
Sbjct: 8 aataa 4
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 93.7 bits (47), Expect = 1e-20
Identities = 66/72 (91%), Gaps = 4/72 (5%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtctagccaccgga----tcgacccgccgggccgggccgg 56
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 72 cttttattaaacccggaccggtccagccaccggtcgggtcgacccgccgggccgggccgg 13
Query: 57 gtttaataacag 68
||||||||||||
Sbjct: 12 gtttaataacag 1
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 91.7 bits (46), Expect = 6e-20
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggtttaat 63
|||||||||||||||||||| ||||||||| || ||| ||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcaacctgccgggccgggccgggtttaat 60
Query: 64 aa 65
||
Sbjct: 61 aa 62
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 81.8 bits (41), Expect = 5e-17
Identities = 64/71 (90%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccg---ccgggccgggccggg 57
||||||||||||||||||||||| ||||||||| |||||| | |||||||||||| ||
Sbjct: 4 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccagg 63
Query: 58 tttaataacag 68
|||||||||||
Sbjct: 64 tttaataacag 74
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 81.8 bits (41), Expect = 5e-17
Identities = 66/75 (88%), Gaps = 7/75 (9%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccacc-------ggatcgacccgccgggccgggc 53
||||||||||||||||||||||||||||||| || ||||||||||||||||| |
Sbjct: 1 cttttattaaacccggaccggtctagccaccgggtcttgggtcgacccgccgggccggac 60
Query: 54 cgggtttaataacag 68
|||||||||||||||
Sbjct: 61 cgggtttaataacag 75
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 81.8 bits (41), Expect = 5e-17
Identities = 60/66 (90%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccaccgga----tcgacccgccgggccgggccgggtt 59
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccggtcgggtcgacccgccgggccgggccgggtt 60
Query: 60 taataa 65
||||||
Sbjct: 61 taataa 66
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 81.8 bits (41), Expect = 5e-17
Identities = 64/71 (90%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccg---ccgggccgggccggg 57
||||||||||||||||||||||| ||||||||| |||||| | |||||||||||| ||
Sbjct: 75 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccagg 16
Query: 58 tttaataacag 68
|||||||||||
Sbjct: 15 tttaataacag 5
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 81.8 bits (41), Expect = 5e-17
Identities = 64/71 (90%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccg---ccgggccgggccggg 57
||||||||||||||||||||||| ||||||||| |||||| | |||||||||||| ||
Sbjct: 82 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccagg 23
Query: 58 tttaataacag 68
|||||||||||
Sbjct: 22 tttaataacag 12
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 71.9 bits (36), Expect = 5e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 cttttattaaacccggaccggtccagccaccggatcgacc 40
Score = 65.9 bits (33), Expect = 3e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 32 ggatcgacccgccgggccgggccgggtttaataacag 68
||||||||| |||||||||||||||||||||||||||
Sbjct: 48 ggatcgacctgccgggccgggccgggtttaataacag 84
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 71.9 bits (36), Expect = 5e-14
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
||||||||||||||||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 4 cttttattaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggttt 62
Query: 61 aataacag 68
||||||||
Sbjct: 63 aataacag 70
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 69.9 bits (35), Expect = 2e-13
Identities = 63/73 (86%), Gaps = 7/73 (9%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatc-------gacccgccgggccgggc 53
||||||||||||||| ||||||| ||||||||| || |||||||||||||||||
Sbjct: 1 cttttattaaacccgaaccggtccagccaccgggtcccgggtcgacccgccgggccgggc 60
Query: 54 cgggtttaataac 66
|||||||||||||
Sbjct: 61 cgggtttaataac 73
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 69.9 bits (35), Expect = 2e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataacag 68
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataacag 87
Score = 56.0 bits (28), Expect = 3e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
||||| ||||||||||||||||| ||||||||| ||||||
Sbjct: 4 cttttgttaaacccggaccggtccagccaccgggtcgacc 43
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 69.9 bits (35), Expect = 2e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataacag 68
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 39 ccgggtcgacccgccgggccgggccgggtttaataacag 1
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 65.9 bits (33), Expect = 3e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataac 66
|||| ||||||||||||||||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataac 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccg 20
||||||||||||||||||||
Sbjct: 5 cttttattaaacccggaccg 24
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 65.9 bits (33), Expect = 3e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataac 66
|||| ||||||||||||||||||||||||||||||||
Sbjct: 52 ccgggtcgacccgccgggccgggccgggtttaataac 88
Score = 63.9 bits (32), Expect = 1e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 7 cttttattaaacccggaccggtccagccaccgggtcgacc 46
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 65.9 bits (33), Expect = 3e-12
Identities = 64/75 (85%), Gaps = 7/75 (9%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtctagccacc-------ggatcgacccgccgggccgggc 53
||||||||||||||||||||||| ||||||| || ||||||| || ||||||||
Sbjct: 78 cttttattaaacccggaccggtccagccaccaggtcccgggtcgacccaccaggccgggc 19
Query: 54 cgggtttaataacag 68
|||||||||||||||
Sbjct: 18 cgggtttaataacag 4
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 63.9 bits (32), Expect = 1e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
|||||| |||||||||||||||| ||||||||||||||||
Sbjct: 4 cttttagtaaacccggaccggtccagccaccggatcgacc 43
Score = 48.1 bits (24), Expect = 8e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
|||| ||||||||| ||| |||||||||||||||||
Sbjct: 49 ccgggtcgacccgctgggtcgggccgggtttaataa 84
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
|||| |||||||||||||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
Score = 58.0 bits (29), Expect = 8e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccaccggatcgacc 40
|||||||||||||||||||| ||||||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 63.9 bits (32), Expect = 1e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 7 cttttattaaacccggaccggtccagccaccgggtcgacc 46
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 38 acccgccgggccgggccgggtttaataacag 68
|||||||||||||| || |||||||||||||
Sbjct: 60 acccgccgggccggaccaggtttaataacag 90
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 63.9 bits (32), Expect = 1e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 4 cttttattaaacccggaccggtccagccaccgggtcgacc 43
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
|||| |||||||||||||||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataa 84
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
|||| |||||||||||||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
Score = 58.0 bits (29), Expect = 8e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccaccggatcgacc 40
|||||||||||||||||||| ||||||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
|||| |||||||||||||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
Score = 58.0 bits (29), Expect = 8e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccaccggatcgacc 40
|||||||||||||||||||| ||||||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
|||| |||||||||||||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
Score = 58.0 bits (29), Expect = 8e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccaccggatcgacc 40
|||||||||||||||||||| ||||||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 63.9 bits (32), Expect = 1e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 8 cttttattaaacccggaccggtccagccaccgggtcgacc 47
Score = 58.0 bits (29), Expect = 8e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataac 66
|||| ||||||||||||||||| ||||||||||||||
Sbjct: 53 ccgggtcgacccgccgggccggaccgggtttaataac 89
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 60.0 bits (30), Expect = 2e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 3 tttattaaacccggaccggtctagccaccggatcgacc 40
||||||||||||||||||||| ||||||||| ||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataac 66
|||| |||||||||||| | |||||||||||||||||
Sbjct: 51 ccgggtcgacccgccggcctgggccgggtttaataac 87
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 60.0 bits (30), Expect = 2e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcga 38
||||||||||||||||||||||| ||||||||| ||||
Sbjct: 7 cttttattaaacccggaccggtccagccaccgggtcga 44
Score = 58.0 bits (29), Expect = 8e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataac 66
|||| |||||||||||||||||| |||||||||||||
Sbjct: 52 ccgggtcgacccgccgggccgggtcgggtttaataac 88
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 58.0 bits (29), Expect = 8e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 37 gacccgccgggccgggccgggtttaataa 65
|||||||||||||||||||||||||||||
Sbjct: 50 gacccgccgggccgggccgggtttaataa 78
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 7 ttaaacccggaccggtctagccaccggatcgacc 40
||||||||||||||||| ||||||||| ||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacc 37
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 58.0 bits (29), Expect = 8e-10
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtctagccaccgg 33
||||||||||||||||||||||| |||||||||
Sbjct: 84 cttttattaaacccggaccggtccagccaccgg 52
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 35 tcgacccgccgggccgggccgggtttaataacag 68
||||||| || |||||||||||||||||||||||
Sbjct: 34 tcgacccaccaggccgggccgggtttaataacag 1
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 56.0 bits (28), Expect = 3e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
|||| |||||||||||||| ||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggctgggccgggtttaataa 78
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 7 ttaaacccggaccggtctagccaccggatcgacc 40
||||||||||||||||| ||||||||| ||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacc 37
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 56.0 bits (28), Expect = 3e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 2 ttttattaaacccggaccggtctagccaccgg 33
|||||||||||||||||||||| |||||||||
Sbjct: 5 ttttattaaacccggaccggtccagccaccgg 36
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 56.0 bits (28), Expect = 3e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
|||| ||||||||||||||||| |||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccggaccgggtttaataa 78
Score = 46.1 bits (23), Expect = 3e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccac 30
|||||||||||||||||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccac 27
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 56.0 bits (28), Expect = 3e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
||||| ||||||||||||||||| ||||||||| ||||||
Sbjct: 4 cttttgttaaacccggaccggtccagccaccgggtcgacc 43
Score = 54.0 bits (27), Expect = 1e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataacag 68
|||| ||||||||||||||| | ||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccagaccgggtttaataacag 87
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 56.0 bits (28), Expect = 3e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccaccggatcgac 39
|||||||||||||||||||| ||||||||| |||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
Score = 56.0 bits (28), Expect = 3e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
|||| ||||||||||||||||||||| |||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 56.0 bits (28), Expect = 3e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
||||||||||||||||||||||| |||||| || ||||||
Sbjct: 7 cttttattaaacccggaccggtccagccactgggtcgacc 46
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 35 tcgacccgccgggccgggccgggtttaataa 65
||||||||||||||||| |||||||||||||
Sbjct: 31 tcgacccgccgggccggtccgggtttaataa 1
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 taaacccggaccggtctagccaccggatcgacc 40
|||||||||||||||| ||||||||| ||||||
Sbjct: 11 taaacccggaccggtccagccaccgggtcgacc 43
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggtttaa 62
|||| ||||||||||||||||| ||||||||||
Sbjct: 49 ccgggtcgacccgccgggccggtccgggtttaa 81
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtctagccaccgg 33
|||||||||||||| |||||||| |||||||||
Sbjct: 64 cttttattaaacccagaccggtccagccaccgg 96
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 4 ttattaaacccggaccggtctagccaccggatcgacc 40
|||||||||||||||||||| ||| ||||| ||||||
Sbjct: 78 ttattaaacccggaccggtccagctaccgggtcgacc 42
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 48.1 bits (24), Expect = 8e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 2 ttttattaaacccggaccggtctagccaccgg 33
||||| |||||||||||||||| |||||||||
Sbjct: 5 ttttagtaaacccggaccggtccagccaccgg 36
>53131_ptc-miRf11309-akr:pmrd
Length = 56
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtctagccacc 31
|||||||||||||||||||| |||||||
Sbjct: 1 ttattaaacccggaccggtccagccacc 28
>52543_ptc-miRf10721-akr:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 3e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 17 accggtctagccaccggatcgacccgccgggccgg 51
||||||| | ||||||| |||||||||||||||||
Sbjct: 38 accggtccaaccaccgggtcgacccgccgggccgg 4
>53864_ptc-miRf12042-akr:pmrd
Length = 79
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 31 cggatcgacccgccgggccgggccgggttt 60
||||||||||| | ||||||||||||||||
Sbjct: 35 cggatcgaccctctgggccgggccgggttt 6
>52818_ptc-miRf10996-akr:pmrd
Length = 78
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 32 ggatcgacccgccgggccgggccgggtttaataa 65
||||| |||||| ||||||| |||||||||||||
Sbjct: 34 ggatcaacccgctgggccggaccgggtttaataa 1
>52817_ptc-miRf10995-akr:pmrd
Length = 78
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 32 ggatcgacccgccgggccgggccgggtttaataa 65
||||| |||||| ||||||| |||||||||||||
Sbjct: 34 ggatcaacccgctgggccggaccgggtttaataa 1
>52391_ptc-miRf10569-akr:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 11 acccggaccggtctagccaccggatcgacccgccgggc 48
||||||||||||| |||||||| | ||||||||||||
Sbjct: 38 acccggaccggtccagccaccgcgttgacccgccgggc 1
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
|||| |||||| ||||||||| |||||||||||||
Sbjct: 45 ccgggtcgacctgccgggccgatccgggtttaataa 10
>52394_ptc-miRf10572-akr:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 9 aaacccggaccggtctagccaccggatcgacccgccgggc 48
||||| ||||||||||||||||| |||||| |||||||
Sbjct: 47 aaaccaggaccggtctagccacctagtcgacctgccgggc 8
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 38.2 bits (19), Expect = 7e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 30 ccggatcgacccgccgggccgggccgggttt 60
|||| ||||||||||||||||| |||||||
Sbjct: 106 ccgggtcgacccgccgggccggttcgggttt 136
>52238_ptc-miRf10416-akr:pmrd
Length = 122
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 35 tcgacccgccgggccgggc 53
|||||||||||||||||||
Sbjct: 23 tcgacccgccgggccgggc 5
