miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53893_ptc-miRf12071-akr:pmrd
Length = 99
Score = 121 bits (61), Expect = 1e-28
Identities = 89/97 (91%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||||||
Sbjct: 2 ttgaccggaaagtgttttctgttgaccaactttcctaatggcaaacaaacacaggaaagt 61
Query: 61 ttggaaggtgg-ttcccggaaaccactttctaggaaa 96
|||||| |||| ||||||||||| |||||| ||||||
Sbjct: 62 ttggaaagtggtttcccggaaactactttccaggaaa 98
>51977_ptc-miRf10155-akr:pmrd
Length = 140
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagt 103
Query: 61 ttggaaggtggtt 73
|||||| ||||||
Sbjct: 104 ttggaaagtggtt 116
>53991_ptc-miRf12169-akr:pmrd
Length = 97
Score = 107 bits (54), Expect = 1e-24
Identities = 82/90 (91%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
|||||||||||||||||||||||||||| ||||||||| | ||| |||| ||||||||||
Sbjct: 1 ttgactggaaagtgttttccgttgaccacctttcctaatgacaaacaaatacaggaaagt 60
Query: 61 ttggaaggtgg-ttcccggaaaccactttc 89
|||||| |||| ||||||||||| ||||||
Sbjct: 61 ttggaaagtggtttcccggaaactactttc 90
>53742_ptc-miRf11920-akr:pmrd
Length = 114
Score = 107 bits (54), Expect = 1e-24
Identities = 82/90 (91%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 11 ttgaccggaaagtgttttccgttgaccaactttcctaatggcaaacaaacacaggaaagt 70
Query: 61 ttggaaggtgg-ttcccggaaaccactttc 89
|| ||| |||| || |||||||| ||||||
Sbjct: 71 ttagaaagtggttttccggaaactactttc 100
>52983_ptc-miRf11161-akr:pmrd
Length = 114
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||| |||||||||||||||||||||| ||||||||| ||||| |||||||||||||||
Sbjct: 11 ttgaccggaaagtgttttccgttgaccacctttcctaatggcaaacaaacacaggaaagt 70
Query: 61 ttggaaggtggttcccgg 78
|||||| |||||| ||||
Sbjct: 71 ttggaaagtggtttccgg 88
>52589_ptc-miRf10767-akr:pmrd
Length = 155
Score = 107 bits (54), Expect = 1e-24
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||
Sbjct: 51 ttgactggaaagtgttttccgttgaccaacttttctaatggcagacaaacacaggaaagt 110
Query: 61 ttggaaggtgg-ttcccggaaa 81
|||||| |||| ||||||||||
Sbjct: 111 ttggaaagtggcttcccggaaa 132
>52118_ptc-miRf10296-akr:pmrd
Length = 140
Score = 107 bits (54), Expect = 1e-24
Identities = 76/82 (92%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 44 ttgactggaaagtgttttccgttgaccaactttcctagtggcaaataaacacaggaaagt 103
Query: 61 ttggaaggtgg-ttcccggaaa 81
|||||| |||| ||||||||||
Sbjct: 104 ttggaaagtggtttcccggaaa 125
>53301_ptc-miRf11479-akr:pmrd
Length = 113
Score = 103 bits (52), Expect = 2e-23
Identities = 77/84 (91%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 7 ggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagtttggaa 66
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 24 ggaaagtgttttccgttgaccaactttcctcgtggcaaacaaacacaggaaagtttggaa 83
Query: 67 ggtgg-ttcccggaaaccactttc 89
|||| |||||||||| |||||||
Sbjct: 84 agtggtttcccggaaatcactttc 107
>52530_ptc-miRf10708-akr:pmrd
Length = 117
Score = 103 bits (52), Expect = 2e-23
Identities = 77/84 (91%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 7 ggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagtttggaa 66
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 92 ggaaagtgttttccgttgaccaactttcctcgtggcaaacaaacacaggaaagtttggaa 33
Query: 67 ggtgg-ttcccggaaaccactttc 89
|||| |||||||||| |||||||
Sbjct: 32 agtggtttcccggaaatcactttc 9
>53786_ptc-miRf11964-akr:pmrd
Length = 99
Score = 99.6 bits (50), Expect = 4e-22
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||| ||||||||||||| ||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 2 ttgaccggaaagtgttttctgttgaccaacttttctaatgacaaacaaacacaggaaagt 61
Query: 61 ttggaaggtgg-ttcccggaaaccactttc 89
|||||| |||| |||||| |||||||||||
Sbjct: 62 ttggaaagtggtttcccgaaaaccactttc 91
>53785_ptc-miRf11963-akr:pmrd
Length = 99
Score = 99.6 bits (50), Expect = 4e-22
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||| ||||||||||||| ||||||||||||| |||| | ||| |||||||||||||||
Sbjct: 2 ttgaccggaaagtgttttctgttgaccaacttttctaatgacaaacaaacacaggaaagt 61
Query: 61 ttggaaggtgg-ttcccggaaaccactttc 89
|||||| |||| |||||| |||||||||||
Sbjct: 62 ttggaaagtggtttcccgaaaaccactttc 91
>53673_ptc-miRf11851-akr:pmrd
Length = 106
Score = 99.6 bits (50), Expect = 4e-22
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
|||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 101 ttgactggaaagtgttttccgttgaccaactttcctaataacaaacaaacacatgaaagt 42
Query: 61 ttggaaggtgg-ttcccggaaaccactttc 89
|||||| |||| || | |||||||||||||
Sbjct: 41 ttggaaagtggtttacaggaaaccactttc 12
>53871_ptc-miRf12049-akr:pmrd
Length = 140
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||||||||||||||||||||||||||||| |||| ||||| |||||| | ||||||
Sbjct: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
Query: 61 ttggaaggtggtt 73
|||||| ||||||
Sbjct: 104 ttggaaagtggtt 116
>53870_ptc-miRf12048-akr:pmrd
Length = 140
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||||||||||||||||||||||||||||| |||| ||||| |||||| | ||||||
Sbjct: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
Query: 61 ttggaaggtggtt 73
|||||| ||||||
Sbjct: 104 ttggaaagtggtt 116
>52852_ptc-miRf11030-akr:pmrd
Length = 114
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||| ||||||||||||||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 11 ttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagt 70
Query: 61 ttggaaggtggtt 73
||| || ||||||
Sbjct: 71 ttgaaaagtggtt 83
>52389_ptc-miRf10567-akr:pmrd
Length = 140
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||||||||||||||||||||||||||||| |||| ||||| |||||| | ||||||
Sbjct: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaaagaaagt 103
Query: 61 ttggaaggtggtt 73
|||||| ||||||
Sbjct: 104 ttggaaagtggtt 116
>51914_ptc-miRf10092-akr:pmrd
Length = 157
Score = 95.6 bits (48), Expect = 5e-21
Identities = 76/84 (90%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 7 ggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagtttggaa 66
|||||||||||| | |||||||||||| |||| ||||| |||||||||||||||||||||
Sbjct: 69 ggaaagtgtttttcattgaccaacttttctaatggcaaacaaacacaggaaagtttggaa 128
Query: 67 ggtgg-ttcccggaaaccactttc 89
|||| |||| |||||||||||||
Sbjct: 129 agtggtttcctggaaaccactttc 152
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttga 25
|||||||||||||||||||||||||
Sbjct: 42 ttgactggaaagtgttttccgttga 66
>54345_ptc-miRf12523-akr:pmrd
Length = 231
Score = 91.7 bits (46), Expect = 9e-20
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||||||||||||||||||||||||||||| | || | ||| |||||||||||||||
Sbjct: 108 ttgactggaaagtgttttccgttgaccaacttttcaaatgtcaaacaaacacaggaaagt 49
Query: 61 ttggaa 66
||||||
Sbjct: 48 ttggaa 43
>53949_ptc-miRf12127-akr:pmrd
Length = 128
Score = 91.7 bits (46), Expect = 9e-20
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 38 ttgactgaaaagtgttttccgttgaccaacttttctagtggcaaataaacacaggaaagt 97
Query: 61 ttggaaggtgg-ttcccggaaa 81
|||||| |||| ||||||||||
Sbjct: 98 ttggaaagtggtttcccggaaa 119
>52895_ptc-miRf11073-akr:pmrd
Length = 101
Score = 91.7 bits (46), Expect = 9e-20
Identities = 80/90 (88%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||| ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||
Sbjct: 3 ttgaccggaaagtgttttccgttgaccaattttcctaatggcaaacaaacacaagaaagt 62
Query: 61 ttggaaggtgg-ttcccggaaaccactttc 89
|| ||| |||| |||||| |||| ||||||
Sbjct: 63 ttagaaagtggtttcccgaaaacgactttc 92
>52894_ptc-miRf11072-akr:pmrd
Length = 114
Score = 91.7 bits (46), Expect = 9e-20
Identities = 80/90 (88%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||| ||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||
Sbjct: 11 ttgaccggaaagtgttttccgttgaccaattttcctaatggcaaacaaacacaagaaagt 70
Query: 61 ttggaaggtgg-ttcccggaaaccactttc 89
|| ||| |||| |||||| |||| ||||||
Sbjct: 71 ttagaaagtggtttcccgaaaacgactttc 100
>54212_ptc-miRf12390-akr:pmrd
Length = 141
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
|||| ||||||||||||||| ||||||||||||||||| | ||| ||||||||||||| |
Sbjct: 45 ttgattggaaagtgttttccattgaccaactttcctaatgtcaaacaaacacaggaaaat 104
Query: 61 ttggaaggtggtt 73
|||||| ||||||
Sbjct: 105 ttggaaagtggtt 117
>53446_ptc-miRf11624-akr:pmrd
Length = 137
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
|||| ||||||||||||||| ||||||||||||||||| | ||| ||||||||||||| |
Sbjct: 95 ttgattggaaagtgttttccattgaccaactttcctaatgtcaaacaaacacaggaaaat 36
Query: 61 ttggaaggtggtt 73
|||||| ||||||
Sbjct: 35 ttggaaagtggtt 23
>53899_ptc-miRf12077-akr:pmrd
Length = 126
Score = 83.8 bits (42), Expect = 2e-17
Identities = 79/90 (87%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
|||||| ||||||||||| |||||||||||||| |||| | ||| |||| ||||||||||
Sbjct: 37 ttgactagaaagtgtttttcgttgaccaacttttctaatgacaaacaaatacaggaaagt 96
Query: 61 ttggaaggtgg-ttcccggaaaccactttc 89
|||||| |||| |||| ||| |||||||||
Sbjct: 97 ttggaaagtggtttccaggacaccactttc 126
>53744_ptc-miRf11922-akr:pmrd
Length = 128
Score = 83.8 bits (42), Expect = 2e-17
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||||||||| |||| |||||| ||||||| |||| |||| |||||||||||||||
Sbjct: 38 ttgactggaaagtatttttcgttgatcaacttttctaatagcaaacaaacacaggaaagt 97
Query: 61 ttggaaggtgg-ttcccggaaa 81
|||||| |||| ||||||||||
Sbjct: 98 ttggaaagtggtttcccggaaa 119
>51902_ptc-miRf10080-akr:pmrd
Length = 178
Score = 83.8 bits (42), Expect = 2e-17
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||| ||||||||||||||||||||||||| ||| ||||| |||||| |||||||
Sbjct: 98 ttgactgaaaagtgttttccgttgaccaacttttttaatggcaaacaaacatgggaaagt 39
Query: 61 ttggaaggtgg-ttcccggaaa 81
|||||| |||| ||||||||||
Sbjct: 38 ttggaaagtggtttcccggaaa 17
>52002_ptc-miRf10180-akr:pmrd
Length = 115
Score = 75.8 bits (38), Expect = 5e-15
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
|||||| |||||||||| | |||||||| ||||||||| ||||| |||||| ||||||||
Sbjct: 32 ttgactagaaagtgttt-ctgttgaccagctttcctaatggcaaacaaacataggaaagt 90
Query: 61 ttggaaggtgg-ttcccggaaa 81
|||||| |||| ||||||||||
Sbjct: 91 ttggaaagtggtttcccggaaa 112
>53331_ptc-miRf11509-akr:pmrd
Length = 107
Score = 69.9 bits (35), Expect = 3e-13
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 15 ttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagtttggaaggtggtt 73
|||| |||||||||||||| || | ||||| ||||||||||||||||||||| ||||||
Sbjct: 31 tttttcgttgaccaacttttcttatggcaaacaaacacaggaaagtttggaaagtggtt 89
>51908_ptc-miRf10086-akr:pmrd
Length = 164
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcc 35
|||||||||||||||||||||||||||||||||||
Sbjct: 130 ttgactggaaagtgttttccgttgaccaactttcc 164
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
|||||||||||||||||||||||||||
Sbjct: 89 ttgactggaaagtgttttccgttgacc 115
>52896_ptc-miRf11074-akr:pmrd
Length = 106
Score = 67.9 bits (34), Expect = 1e-12
Identities = 77/90 (85%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
||||||||||| ||||||| ||||||||||||| |||| | ||| ||||| || ||||||
Sbjct: 101 ttgactggaaaatgttttctgttgaccaacttttctaatgacaaacaaacgcatgaaagt 42
Query: 61 ttggaaggtgg-ttcccggaaaccactttc 89
|| ||| |||| |||| | |||||||||||
Sbjct: 41 ttagaaagtggtttccagaaaaccactttc 12
>53122_ptc-miRf11300-akr:pmrd
Length = 144
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcc 35
||||| |||||||||||||||||||||||||||||
Sbjct: 110 ttgaccggaaagtgttttccgttgaccaactttcc 144
>52523_ptc-miRf10701-akr:pmrd
Length = 144
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcc 35
||||| |||||||||||||||||||||||||||||
Sbjct: 110 ttgaccggaaagtgttttccgttgaccaactttcc 144
>52140_ptc-miRf10318-akr:pmrd
Length = 144
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcc 35
||||| |||||||||||||||||||||||||||||
Sbjct: 110 ttgaccggaaagtgttttccgttgaccaactttcc 144
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
|||||||||||||||||||||||||||
Sbjct: 89 ttgactggaaagtgttttccgttgacc 115
>52053_ptc-miRf10231-akr:pmrd
Length = 144
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcc 35
||||| |||||||||||||||||||||||||||||
Sbjct: 110 ttgaccggaaagtgttttccgttgaccaactttcc 144
>51961_ptc-miRf10139-akr:pmrd
Length = 144
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcc 35
||||| |||||||||||||||||||||||||||||
Sbjct: 110 ttgaccggaaagtgttttccgttgaccaactttcc 144
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
|||||||||||||||||||||||||||
Sbjct: 89 ttgactggaaagtgttttccgttgacc 115
>53759_ptc-miRf11937-akr:pmrd
Length = 149
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaa 38
||||| ||||||||||||||||||||||||||| ||||
Sbjct: 112 ttgaccggaaagtgttttccgttgaccaacttttctaa 149
>52487_ptc-miRf10665-akr:pmrd
Length = 152
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttc 34
||||| ||||||||||||||||||||||||||||
Sbjct: 119 ttgaccggaaagtgttttccgttgaccaactttc 152
>52458_ptc-miRf10636-akr:pmrd
Length = 138
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 ttgactggaaagtgttttccgttgaccaacttt 33
||||| |||||||||||||||||||||||||||
Sbjct: 33 ttgaccggaaagtgttttccgttgaccaacttt 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 7 ggaaagtgttttccgttgac 26
||||||||||||||||||||
Sbjct: 89 ggaaagtgttttccgttgac 70
>52319_ptc-miRf10497-akr:pmrd
Length = 138
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 ttgactggaaagtgttttccgttgaccaactt 32
||||| ||||||||||||||||||||||||||
Sbjct: 32 ttgaccggaaagtgttttccgttgaccaactt 1
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1 ttgactggaaagtgttttccgttgacc 27
|||||||||||||||||||||||||||
Sbjct: 53 ttgactggaaagtgttttccgttgacc 27
>54077_ptc-miRf12255-akr:pmrd
Length = 143
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
|||||||||||||||||||||||||||
Sbjct: 89 ttgactggaaagtgttttccgttgacc 115
Score = 42.1 bits (21), Expect = 7e-05
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaacttt 33
||||| ||||||||||| |||||||||||||||
Sbjct: 110 ttgaccggaaagtgttt-ccgttgaccaacttt 141
>54076_ptc-miRf12254-akr:pmrd
Length = 151
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
|||||||||||||||||||||||||||
Sbjct: 93 ttgactggaaagtgttttccgttgacc 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcctaa 38
||||| ||||||||||| ||||||||||||||| ||||
Sbjct: 114 ttgaccggaaagtgttt-ccgttgaccaacttttctaa 150
>52395_ptc-miRf10573-akr:pmrd
Length = 166
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgaccaactttcc 35
||||| |||||||||||||||||||||| ||||||
Sbjct: 132 ttgaccggaaagtgttttccgttgaccacctttcc 166
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacca 28
||||||||||||||||||||||| ||||
Sbjct: 90 ttgactggaaagtgttttccgttaacca 117
>52085_ptc-miRf10263-akr:pmrd
Length = 161
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
|||||||||||||||||||||||||||
Sbjct: 93 ttgactggaaagtgttttccgttgacc 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacca 28
||||| ||||||||||||||||||||||
Sbjct: 134 ttgaccggaaagtgttttccgttgacca 161
>51880_ptc-miRf10058-akr:pmrd
Length = 151
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
|||||||||||||||||||||||||||
Sbjct: 83 ttgactggaaagtgttttccgttgacc 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacca 28
||||| ||||||||||||||||||||||
Sbjct: 124 ttgaccggaaagtgttttccgttgacca 151
>54023_ptc-miRf12201-akr:pmrd
Length = 66
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttga 25
|||||||||||||||||||||||||
Sbjct: 42 ttgactggaaagtgttttccgttga 66
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
|||||||||||| ||||||||||||||
Sbjct: 1 ttgactggaaagcgttttccgttgacc 27
>52909_ptc-miRf11087-akr:pmrd
Length = 115
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttga 25
|||||||||||||||||||||||||
Sbjct: 12 ttgactggaaagtgttttccgttga 36
>52524_ptc-miRf10702-akr:pmrd
Length = 131
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacca 28
||||| ||||||||||||||||||||||
Sbjct: 104 ttgaccggaaagtgttttccgttgacca 131
>52110_ptc-miRf10288-akr:pmrd
Length = 131
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacca 28
||||| ||||||||||||||||||||||
Sbjct: 104 ttgaccggaaagtgttttccgttgacca 131
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
|||||||||||||||||| ||||||||
Sbjct: 83 ttgactggaaagtgtttttcgttgacc 109
>52052_ptc-miRf10230-akr:pmrd
Length = 131
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacca 28
||||| ||||||||||||||||||||||
Sbjct: 104 ttgaccggaaagtgttttccgttgacca 131
>53581_ptc-miRf11759-akr:pmrd
Length = 75
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
||||||||||| |||||||||||||||
Sbjct: 5 ttgactggaaaatgttttccgttgacc 31
>53267_ptc-miRf11445-akr:pmrd
Length = 75
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
||||||||||| |||||||||||||||
Sbjct: 5 ttgactggaaaatgttttccgttgacc 31
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
||||||||||| |||||||||||||||
Sbjct: 46 ttgactggaaaatgttttccgttgacc 72
>53153_ptc-miRf11331-akr:pmrd
Length = 143
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1 ttgactggaaagtgttttccgttgacc 27
||||||||||||||||||| |||||||
Sbjct: 55 ttgactggaaagtgttttctgttgacc 29
>51924_ptc-miRf10102-akr:pmrd
Length = 120
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttgacc 27
||||| |||||||||||||||||||||
Sbjct: 93 ttgaccggaaagtgttttccgttgacc 119
>51859_ptc-miRf10037-akr:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttgactggaaagtgttttccgttga 25
||||| |||||||||||||||||||
Sbjct: 105 ttgaccggaaagtgttttccgttga 129
