miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 131 bits (66), Expect = 9e-32
Identities = 78/82 (95%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
||||||||||||||||||||||||||||||||| |||||||||||| || |||||| |||
Sbjct: 7 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgcc 66
Query: 61 gggccgggccgggtttaataac 82
||||||||||||||||||||||
Sbjct: 67 gggccgggccgggtttaataac 88
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 129 bits (65), Expect = 3e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
||||||||||||||||||||||||||||||||| |||||||||||| || |||||| |||
Sbjct: 4 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgcc 63
Query: 61 gggccgggccgggtttaataa 81
|||||||||||||||||||||
Sbjct: 64 gggccgggccgggtttaataa 84
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 127 bits (64), Expect = 1e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
||||| ||||||||||||||||||||||||||| |||||||||||| || |||||| |||
Sbjct: 4 cttttgttaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgcc 63
Query: 61 gggccgggccgggtttaataacag 84
||||||||||||||||||||||||
Sbjct: 64 gggccgggccgggtttaataacag 87
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccggg 63
|||||||||||||||||||||||||||||| |||||||||||| || |||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 64 ccgggccgggtttaataa 81
||||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccggg 63
|||||||||||||||||||||||||||||| |||||||||||| || |||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 64 ccgggccgggtttaataa 81
||||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccggg 63
|||||||||||||||||||||||||||||| |||||||||||| || |||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 64 ccgggccgggtttaataa 81
||||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccggg 63
|||||||||||||||||||||||||||||| |||||||||||| || |||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 64 ccgggccgggtttaataa 81
||||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 123 bits (62), Expect = 2e-29
Identities = 77/82 (93%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
||||||||||||||||||||||||||||||||| |||||||||||| || |||||| |||
Sbjct: 8 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgcc 67
Query: 61 gggccgggccgggtttaataac 82
||||||| ||||||||||||||
Sbjct: 68 gggccggaccgggtttaataac 89
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 115 bits (58), Expect = 5e-27
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
||||||||||||||||||||||||||||||||| |||| ||||||| || |||||| |||
Sbjct: 7 cttttattaaacccggaccggtccagccaccgggtcgatcgggtcccgggtcgacccgcc 66
Query: 61 gggccgggccgggtttaataac 82
|||||||| |||||||||||||
Sbjct: 67 gggccgggtcgggtttaataac 88
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 111 bits (56), Expect = 8e-26
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
||||| ||||||||||||||||||||||||||| |||||||||||| || |||||| |||
Sbjct: 4 cttttgttaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgcc 63
Query: 61 gggccgggccgggtttaataacag 84
||||| | ||||||||||||||||
Sbjct: 64 gggccagaccgggtttaataacag 87
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 109 bits (55), Expect = 3e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 7 ttaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccgggccg 66
||||||||||||||||||||||||||| |||||||||||| || | |||| |||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggttgacccgccgggccg 63
Query: 67 ggccgggtttaataa 81
|||||||||||||||
Sbjct: 64 ggccgggtttaataa 78
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccggg 63
|||||||||||||||||||||||||||||| ||||| |||||| || |||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
Query: 64 ccgggccgggtttaataa 81
|||||||| |||||||||
Sbjct: 61 ccgggccgagtttaataa 78
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 105 bits (53), Expect = 5e-24
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
|||||| ||||||||||||||||||||||||||||||||| ||||| || |||||| ||
Sbjct: 4 cttttagtaaacccggaccggtccagccaccggatcgaccaggtcccgggtcgacccgct 63
Query: 61 gggccgggccgggtttaataa 81
||| |||||||||||||||||
Sbjct: 64 gggtcgggccgggtttaataa 84
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 103 bits (52), Expect = 2e-23
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
||||||||||||||||||||||||||||||||| | |||||||||| | |||||| ||
Sbjct: 84 cttttattaaacccggaccggtccagccaccgggttgaccgggtcccgattcgacccacc 25
Query: 61 gggccgggccgggtttaataacag 84
|||||||||||||||||||||||
Sbjct: 24 aggccgggccgggtttaataacag 1
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 101 bits (51), Expect = 8e-23
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 7 ttaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccgggccg 66
||||||||||||||||||||||||||| ||||||| |||| || |||||| ||||||| |
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgagtcccgggtcgacccgccgggctg 63
Query: 67 ggccgggtttaataa 81
|||||||||||||||
Sbjct: 64 ggccgggtttaataa 78
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 101 bits (51), Expect = 8e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 8 taaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccgggccgg 67
|||||||||||||||||||||||||| |||||||||||| || |||||| ||||||||||
Sbjct: 11 taaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggccgg 70
Query: 68 gccgggtttaa 78
||||||||||
Sbjct: 71 tccgggtttaa 81
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccggg 63
||||||||||||||||||||||||||| || |||| ||||||| || |||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccactgggtcgatcgggtcccgggtcgacccgccggg 60
Query: 64 ccgggccgggtttaataa 81
|||| |||||||||||||
Sbjct: 61 ccggaccgggtttaataa 78
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 99.6 bits (50), Expect = 3e-22
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
|||||||||||||||||||| |||||| ||||| |||| ||||||| || |||||| |||
Sbjct: 5 cttttattaaacccggaccg-tccagcgaccgggtcgatcgggtcccgggtcgacccgcc 63
Query: 61 gggccgggccgggtttaataac 82
||||||||||||||||||||||
Sbjct: 64 gggccgggccgggtttaataac 85
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 97.6 bits (49), Expect = 1e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
|||||||||||||||||||||||||||||| || |||||||||||| || ||||| |||
Sbjct: 7 cttttattaaacccggaccggtccagccactgggtcgaccgggtcccgggtcgactcgcc 66
Query: 61 gggccgggccgggtttaataa 81
||||| |||||||| ||||||
Sbjct: 67 gggccaggccgggtgtaataa 87
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 95.6 bits (48), Expect = 5e-21
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
||||||||||||||||||||||||||||||||| |||||||| ||| | || ||| |||
Sbjct: 7 cttttattaaacccggaccggtccagccaccgggtcgaccggatcccaggtctacccgcc 66
Query: 61 gggccgggccgggtttaataacag 84
||||||| || |||||||||||||
Sbjct: 67 gggccggaccaggtttaataacag 90
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 95.6 bits (48), Expect = 5e-21
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 3 tttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccgg 62
||||||||||||||||||||||||||||||| |||||| ||||| || |||||| |||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccgg 67
Query: 63 gccgggccgggtttaataac 82
| |||||||||||||||||
Sbjct: 68 cctgggccgggtttaataac 87
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 83.8 bits (42), Expect = 2e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcc 46
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcc 49
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 83.8 bits (42), Expect = 2e-17
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcc 46
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 75 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcc 30
>52818_ptc-miRf10996-akr:pmrd
Length = 78
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 4 ttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccggg 63
|||||||||||| |||| ||||||||| | ||||||||||| ||||||| ||| || |||
Sbjct: 78 ttattaaacccgaaccgatccagccactgaatcgaccgggttctggatcaacccgctggg 19
Query: 64 ccgggccgggtttaataa 81
|||| |||||||||||||
Sbjct: 18 ccggaccgggtttaataa 1
>52817_ptc-miRf10995-akr:pmrd
Length = 78
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 4 ttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccggg 63
|||||||||||| |||| ||||||||| | ||||||||||| ||||||| ||| || |||
Sbjct: 78 ttattaaacccgaaccgatccagccactgaatcgaccgggttctggatcaacccgctggg 19
Query: 64 ccgggccgggtttaataa 81
|||| |||||||||||||
Sbjct: 18 ccggaccgggtttaataa 1
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 83.8 bits (42), Expect = 2e-17
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcc 46
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 82 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcc 37
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 77.8 bits (39), Expect = 1e-15
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 30 ccggatcgaccgggtcctggatcgacctgccgggccgggccgggtttaataacag 84
|||| |||||||||||| || |||||| |||||||||||||||||||||||||||
Sbjct: 55 ccgggtcgaccgggtcccgggtcgacccgccgggccgggccgggtttaataacag 1
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 71.9 bits (36), Expect = 7e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgacc 40
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 7 cttttattaaacccggaccggtccagccaccgggtcgacc 46
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 51 tcgacctgccgggccgggccgggtttaataacag 84
|||||| |||||||||||||| ||||||||||||
Sbjct: 41 tcgacccgccgggccgggccgagtttaataacag 74
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 71.9 bits (36), Expect = 7e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgacc 40
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5 cttttattaaacccggaccggtccagccaccgggtcgacc 44
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 51 tcgacctgccgggccgggccgggtttaataacag 84
|||||| ||||| |||||||| ||||||||||||
Sbjct: 39 tcgacccgccggaccgggccgagtttaataacag 72
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 71.9 bits (36), Expect = 7e-14
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgacc 40
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 72 cttttattaaacccggaccggtccagccaccgggtcgacc 33
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 51 tcgacctgccgggccgggccgggtttaataaca 83
||||||||| |||||||||||||||||||||||
Sbjct: 38 tcgacctgctgggccgggccgggtttaataaca 6
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 71.9 bits (36), Expect = 7e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgacc 40
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4 cttttattaaacccggaccggtccagccaccgggtcgacc 43
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 51 tcgacctgccgggccgggccgggtttaataacag 84
|||||| ||| |||||||||||||||||||||||
Sbjct: 38 tcgacccgccaggccgggccgggtttaataacag 71
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 71.9 bits (36), Expect = 7e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgacc 40
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagccaccggatcgacc 40
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 48 ggatcgacctgccgggccgggccgggtttaataacag 84
||||||||| |||||||||||||||||||||||||||
Sbjct: 32 ggatcgacccgccgggccgggccgggtttaataacag 68
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 71.9 bits (36), Expect = 7e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgacc 40
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4 cttttattaaacccggaccggtccagccaccgggtcgacc 43
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 51 tcgacctgccgggccgggccgggtttaataac 82
|||||| |||||||||||||||||||||||||
Sbjct: 38 tcgacccgccgggccgggccgggtttaataac 69
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 71.9 bits (36), Expect = 7e-14
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggt 44
||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagctaccggatcgaccgggt 44
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 69.9 bits (35), Expect = 3e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgac 39
||||||||||||||||||||||||||||||||| |||||
Sbjct: 68 cttttattaaacccggaccggtccagccaccgggtcgac 30
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 51 tcgacctgccgggccgggccgggtttaataa 81
||||| |||||||||||||||||||||||||
Sbjct: 34 tcgacttgccgggccgggccgggtttaataa 4
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 67.9 bits (34), Expect = 1e-12
Identities = 69/82 (84%), Gaps = 9/82 (10%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
||||||||||||||| ||||||||||||||||| |||| || |||||| |||
Sbjct: 1 cttttattaaacccgaaccggtccagccaccgg---------gtcccgggtcgacccgcc 51
Query: 61 gggccgggccgggtttaataac 82
||||||||||||||||||||||
Sbjct: 52 gggccgggccgggtttaataac 73
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 51 tcgacctgccgggccgggccgggtttaataacag 84
||||||||||||||||||||||||||||||||||
Sbjct: 34 tcgacctgccgggccgggccgggtttaataacag 1
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgacc 40
||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 68 cttttattaaacccggaccggtccaaccaccgggtcgacc 29
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtccagccaccgg 33
|||||||||||||||||||||||||||||||||
Sbjct: 72 cttttattaaacccggaccggtccagccaccgg 40
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 51 tcgacctgccgggccgggccgggtttaataacag 84
|||||| |||||||||||||||||||||||||||
Sbjct: 34 tcgacccgccgggccgggccgggtttaataacag 1
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccaccggatcgacc 40
|||||||||||||||||||||||||||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 tcgacctgccgggccgggccgggtttaataa 81
|||||| ||||||||||||||||||||||||
Sbjct: 32 tcgacccgccgggccgggccgggtttaataa 62
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccaccggatcgacc 40
|||||||||||||||||||||||||||||| ||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 tcgacctgccgggccgggccgggtttaataa 81
|||||| ||||||||||||||||||||||||
Sbjct: 32 tcgacccgccgggccgggccgggtttaataa 62
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccgg 33
|||||||||||||||||||||||||||||||||
Sbjct: 4 cttttattaaacccggaccggtccagccaccgg 36
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 58 gccgggccgggccgggtttaataacag 84
|||||||||||||||||||||||||||
Sbjct: 44 gccgggccgggccgggtttaataacag 70
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 2 ttttattaaacccggaccggtccagccaccgg 33
||||||||||||||||||||||||||||||||
Sbjct: 5 ttttattaaacccggaccggtccagccaccgg 36
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 63.9 bits (32), Expect = 2e-11
Identities = 70/84 (83%), Gaps = 9/84 (10%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgcc 60
||||||||||||||||||||||| ||||||||| ||| ||| |||||| |||
Sbjct: 1 cttttattaaacccggaccggtctagccaccgg---------gtcttgggtcgacccgcc 51
Query: 61 gggccgggccgggtttaataacag 84
||||||| ||||||||||||||||
Sbjct: 52 gggccggaccgggtttaataacag 75
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtccagccacc 31
|||||||||||||||||||||||||||||||
Sbjct: 78 cttttattaaacccggaccggtccagccacc 48
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 60.0 bits (30), Expect = 3e-10
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 9 aaacccggaccggtccagccacc-ggatcgaccgggtcctggatcgacctgccgggccgg 67
||||||| |||||||||||||| |||| ||||||||| || ||||||||||||||||
Sbjct: 82 aaacccgaaccggtccagccactaggata-accgggtcccgggtcgacctgccgggccga 24
Query: 68 gccgggtttaataa 81
|||||||||||||
Sbjct: 23 tccgggtttaataa 10
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccaccgg 33
||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgg 30
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 tcgacctgccgggccgggccgggtttaataa 81
|||||| ||||||||||||||||||||||||
Sbjct: 36 tcgacccgccgggccgggccgggtttaataa 66
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 7 ttaaacccggaccggtccagccaccggatcgacc 40
||||||||||||||||||||||||||| ||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacc 37
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 51 tcgacctgccgggccgggccgggtttaataa 81
|||||| ||||||||||||||||||||||||
Sbjct: 32 tcgacccgccgggccgggccgggtttaataa 62
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 60.0 bits (30), Expect = 3e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcc 46
|||||| ||||||| |||||||||||||||||| |||| |||||||
Sbjct: 71 cttttaataaacccagaccggtccagccaccgggtcgatcgggtcc 116
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccaccgg 33
||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgg 30
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 54 acctgccgggccgggccgggtttaataa 81
||||||||||||||||||||||||||||
Sbjct: 35 acctgccgggccgggccgggtttaataa 62
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 60.0 bits (30), Expect = 3e-10
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 4 ttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccggg 63
|||||||||||||||||||||||| ||||| |||||| ||| | | | |||| |||| |
Sbjct: 78 ttattaaacccggaccggtccagctaccgggtcgaccaggttccaggttgacccgccgag 19
Query: 64 ccgggccgggtttaataa 81
||| |||| |||||||||
Sbjct: 18 ccgagccgagtttaataa 1
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 58.0 bits (29), Expect = 1e-09
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 9 aaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccgggccggg 68
||||||| |||||||||| |||| ||| |||||||| | |||||| ||||||||||
Sbjct: 73 aaacccgaaccggtccaggtcccgggtcggccgggtcccgagtcgacccgccgggccggt 14
Query: 69 ccgggtttaataa 81
|||||||||||||
Sbjct: 13 ccgggtttaataa 1
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 cttttattaaacccggaccggtccagccaccgg 33
|||||||||||||| ||||||||||||||||||
Sbjct: 64 cttttattaaacccagaccggtccagccaccgg 96
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 2 ttttattaaacccggaccggtccagccaccgg 33
||||| ||||||||||||||||||||||||||
Sbjct: 5 ttttagtaaacccggaccggtccagccaccgg 36
>53131_ptc-miRf11309-akr:pmrd
Length = 56
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 4 ttattaaacccggaccggtccagccacc 31
||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccacc 28
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 gggccgggccgggtttaataa 81
|||||||||||||||||||||
Sbjct: 36 gggccgggccgggtttaataa 56
>51920_ptc-miRf10098-akr:pmrd
Length = 84
Score = 52.0 bits (26), Expect = 6e-08
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 2 ttttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccg 61
||||| ||||||||||||||||| || || || |||||||||||| | |||||| |||
Sbjct: 81 ttttagtaaacccggaccggtccggctactgggtcgaccgggtcccgagtcgacccaccg 22
Query: 62 ggccgg 67
||||||
Sbjct: 21 ggccgg 16
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 9 aaacccggaccggtccagccaccggatcgaccgggt 44
|||| |||||||||||||||| ||| ||||||||||
Sbjct: 11 aaactcggaccggtccagccatcgggtcgaccgggt 46
>52059_ptc-miRf10237-akr:pmrd
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 9 aaacccggaccggtccagccaccggatcgacc 40
|||||||||| |||||||||||||| ||||||
Sbjct: 42 aaacccggactggtccagccaccgggtcgacc 11
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 46.1 bits (23), Expect = 4e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 30 ccggatcgaccgggtcctggatcgacctgccgggccgggccgggttt 76
|||| |||||||||||| || |||||| |||||||||| |||||||
Sbjct: 90 ccgggtcgaccgggtcccgggtcgacccgccgggccggttcgggttt 136
>52391_ptc-miRf10569-akr:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 acccggaccggtccagccaccg 32
||||||||||||||||||||||
Sbjct: 38 acccggaccggtccagccaccg 17
>54004_ptc-miRf12182-akr:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 6e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 9 aaacccggaccggtccagccaccggatcgaccgggtc 45
||||||| |||||||||||| |||| ||| |||||||
Sbjct: 72 aaacccgaaccggtccagcccccgggtcggccgggtc 108
>52317_ptc-miRf10495-akr:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 6e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 10 aacccggaccggtccagccaccggatcgaccgggtcc 46
|||| ||| ||||||||||||||| | ||||||||||
Sbjct: 78 aaccaggaacggtccagccaccgggttgaccgggtcc 114
>52570_ptc-miRf10748-akr:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 gtccagccaccggatcgacc 40
||||||||||||||||||||
Sbjct: 28 gtccagccaccggatcgacc 9
>51849_ptc-miRf10027-akr:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1 cttttattaaacccggaccggtccagccaccg 32
|||||| ||||| || ||||||||||||||||
Sbjct: 62 cttttaataaactcgaaccggtccagccaccg 31
>54211_ptc-miRf12389-akr:pmrd
Length = 124
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 15 ggaccggtccagccaccgg 33
|||||||||||||||||||
Sbjct: 68 ggaccggtccagccaccgg 86
>52233_ptc-miRf10411-akr:pmrd
Length = 114
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 13 ccggaccggtccagccacc 31
|||||||||||||||||||
Sbjct: 46 ccggaccggtccagccacc 28
