miRNEST 2.0, an integrative microRNA resource :: BLAST
>45885_miR530:micropc
Length = 135
Score = 204 bits (103), Expect = 1e-53
Identities = 128/135 (94%), Gaps = 1/135 (0%)
Strand = Plus / Plus
Query: 10 tgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaacaaaatcaa 68
|||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcatcttattgcttttgttttgttcttgactccacaaacaaaatcaa 60
Query: 69 gttctgtcgatacagtatgtgggacaattagatatggaaactaataagcttagttgaggt 128
||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||
Sbjct: 61 cttctgtcgatacagtatgtggtacaattagctatggaaactcataagcttagttgaggt 120
Query: 129 gcaggtgcaagtgca 143
|||||||||||||||
Sbjct: 121 gcaggtgcaagtgca 135
>46279_miR530:micropc
Length = 148
Score = 200 bits (101), Expect = 2e-52
Identities = 134/148 (90%), Gaps = 14/148 (9%)
Strand = Plus / Plus
Query: 10 tgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaag 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaag 60
Query: 70 ttctgtcgatacagtatgtgggacaa--------------ttagatatggaaactaataa 115
|||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 61 ttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaataa 120
Query: 116 gcttagttgaggtgcaggtgcaagtgca 143
||||||||||||||||||||||||||||
Sbjct: 121 gcttagttgaggtgcaggtgcaagtgca 148
>46654_miR1030:micropc
Length = 151
Score = 198 bits (100), Expect = 8e-52
Identities = 136/151 (90%), Gaps = 14/151 (9%)
Strand = Plus / Minus
Query: 9 ctgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ctgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaa 92
Query: 69 gttctgtcgatacagtatgtgggacaattag--------------atatggaaactaata 114
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 91 gttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaata 32
Query: 115 agcttagttgaggtgcaggtgcaagtgcagg 145
||||||||||||||||||||||| |||||||
Sbjct: 31 agcttagttgaggtgcaggtgcaggtgcagg 1
>45830_miR1030:micropc
Length = 150
Score = 196 bits (99), Expect = 3e-51
Identities = 135/150 (90%), Gaps = 14/150 (9%)
Strand = Plus / Minus
Query: 9 ctgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 ctgcatttgcacctgcatcttttgcgtttgttttgtttttgactccacaaacaaaatcaa 91
Query: 69 gttctgtcgatacagtatgtgggacaattag--------------atatggaaactaata 114
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 90 gttctgtcgatacagtatgtgggacaattagatatagagtgttagatatggaaactaata 31
Query: 115 agcttagttgaggtgcaggtgcaagtgcag 144
||||||||||||||||||||||| ||||||
Sbjct: 30 agcttagttgaggtgcaggtgcaggtgcag 1
>45983_miR530:micropc
Length = 138
Score = 141 bits (71), Expect = 2e-34
Identities = 124/138 (89%), Gaps = 4/138 (2%)
Strand = Plus / Plus
Query: 10 tgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaacaaaatc-a 67
|||||||||||||||||||| ||||||||| |||| | |||| |||| ||| ||||| |
Sbjct: 1 tgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaaaaacaaatcca 60
Query: 68 agttctgt--cgatacagtatgtgggacaattagatatggaaactaataagcttagttga 125
||||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttccgtgccgatccagaatgtgggacaattagatatggaaactaataagcttagttga 120
Query: 126 ggtgcaggtgcaagtgca 143
||||||||||||||||||
Sbjct: 121 ggtgcaggtgcaagtgca 138
>45671_miR530:micropc
Length = 138
Score = 141 bits (71), Expect = 2e-34
Identities = 124/138 (89%), Gaps = 4/138 (2%)
Strand = Plus / Plus
Query: 10 tgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaacaaaatc-a 67
|||||||||||||||||||| ||||||||| |||| | |||| |||| ||| ||||| |
Sbjct: 1 tgcatttgcacctgcatcttattgcgtttggtttggtattgaatccaaaaaacaaatcca 60
Query: 68 agttctgt--cgatacagtatgtgggacaattagatatggaaactaataagcttagttga 125
||||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttccgtgccgatccagaatgtgggacaattagatatggaaactaataagcttagttga 120
Query: 126 ggtgcaggtgcaagtgca 143
||||||||||||||||||
Sbjct: 121 ggtgcaggtgcaagtgca 138
>46152_miR530:micropc
Length = 134
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tgcatttgcacctgcatctt 29
||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcatctt 20
>45910_miR530:micropc
Length = 134
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tgcatttgcacctgcatctt 29
||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcatctt 20
>44837_miR1030:micropc
Length = 109
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 122 ttgaggtgcaggtgcaagtgcagg 145
|||||||||||||||| |||||||
Sbjct: 24 ttgaggtgcaggtgcaggtgcagg 1
