miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52480_ptc-miRf10658-akr:pmrd
Length = 107
Score = 153 bits (77), Expect = 3e-38
Identities = 98/105 (93%)
Strand = Plus / Minus
Query: 1 acagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataa 60
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 106 acagttttaccgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataa 47
Query: 61 ttaccgatggcttcaccgacggaacacgtccgtcagtataatagt 105
||||| | ||| |||| ||||||||||||||||| ||||||||||
Sbjct: 46 ttaccaacggcctcactgacggaacacgtccgtcggtataatagt 2
>52071_ptc-miRf10249-akr:pmrd
Length = 105
Score = 153 bits (77), Expect = 3e-38
Identities = 98/105 (93%)
Strand = Plus / Plus
Query: 1 acagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataa 60
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 1 acagttttaccgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataa 60
Query: 61 ttaccgatggcttcaccgacggaacacgtccgtcagtataatagt 105
||||| | ||| |||| ||||||||||||||||| ||||||||||
Sbjct: 61 ttaccaacggcctcactgacggaacacgtccgtcggtataatagt 105
>52166_ptc-miRf10344-akr:pmrd
Length = 99
Score = 141 bits (71), Expect = 1e-34
Identities = 92/99 (92%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 1 gttttatcgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataatta 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtataat 102
|||| ||| ||| |||||||||||||||||| |||||||
Sbjct: 61 ccgacggcctcatcgacggaacacgtccgtcggtataat 99
>54311_ptc-miRf12489-akr:pmrd
Length = 100
Score = 131 bits (66), Expect = 1e-31
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 3 agttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatt 62
|||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 1 agttttaccgacggactacttccgtcggtgacaggaacgaactccatcggtgaaataatt 60
Query: 63 accgatggcttcaccgacggaacacgtccgtcagtata 100
||||| ||| |||||||| ||||| ||||||| |||||
Sbjct: 61 accgacggcctcaccgacagaacaagtccgtcggtata 98
>54224_ptc-miRf12402-akr:pmrd
Length = 105
Score = 131 bits (66), Expect = 1e-31
Identities = 87/94 (92%)
Strand = Plus / Plus
Query: 1 acagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataa 60
||||||||||||||||||| ||||| || |||||||||||||||||| |||||||||||
Sbjct: 1 acagttttaccgacggactcattccatcggtgacaggaatgaactccgtcggtgaaatat 60
Query: 61 ttaccgatggcttcaccgacggaacacgtccgtc 94
||||||| ||| ||||||||||||||||||||||
Sbjct: 61 ttaccgacggcctcaccgacggaacacgtccgtc 94
>53201_ptc-miRf11379-akr:pmrd
Length = 105
Score = 129 bits (65), Expect = 4e-31
Identities = 95/105 (90%)
Strand = Plus / Plus
Query: 1 acagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataa 60
|||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||
Sbjct: 1 acagttttaccgacggactaattccgtcggtgacaggaatgcactttgtcggtgaaataa 60
Query: 61 ttaccgatggcttcaccgacggaacacgtccgtcagtataatagt 105
||||||| ||| ||||| |||||||||||| ||| ||||||||||
Sbjct: 61 ttaccgacggcctcaccaacggaacacgtctgtcggtataatagt 105
>53422_ptc-miRf11600-akr:pmrd
Length = 91
Score = 127 bits (64), Expect = 2e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 11 cgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataattaccgatgg 70
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 4 cgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataattaccgacgg 63
Query: 71 cttcaccgacggaacacgtccgtc 94
| ||| ||||||||||||||||||
Sbjct: 64 cctcatcgacggaacacgtccgtc 87
>53602_ptc-miRf11780-akr:pmrd
Length = 100
Score = 123 bits (62), Expect = 3e-29
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 3 agttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatt 62
|||||||||||||||||||||||||| |||||||||||||| ||| |||||||||| |||
Sbjct: 1 agttttaccgacggactaattccgtcggtgacaggaatgaaatccgtcggtgaaatcatt 60
Query: 63 accgatggcttcaccgacggaacacgtccgtcagtata 100
||||| ||| ||||||||| || ||||||||| |||||
Sbjct: 61 accgacggcctcaccgacgaaatacgtccgtcggtata 98
>53168_ptc-miRf11346-akr:pmrd
Length = 98
Score = 121 bits (61), Expect = 1e-28
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
||||||||||| ||||||||||||| |||| ||||||||| ||| |||||||||||||||
Sbjct: 1 gttttaccgacagactaattccgtcggtgataggaatgaaatccgtcggtgaaataatta 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtata 100
|||| ||| ||| |||||||||||||||||| |||||
Sbjct: 61 ccgacggcctcatcgacggaacacgtccgtcggtata 97
>52567_ptc-miRf10745-akr:pmrd
Length = 99
Score = 109 bits (55), Expect = 4e-25
Identities = 88/99 (88%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||||| |||||||| |||| || ||| ||||| |||||||||||||||
Sbjct: 1 gttttaccgacggactcattccgtcggtgatagaaatcaactctgtcggtgaaataatta 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtataat 102
|||||||| |||||||||||||| |||||| |||||||
Sbjct: 61 ccgatggcctcaccgacggaacatatccgtcggtataat 99
>52255_ptc-miRf10433-akr:pmrd
Length = 104
Score = 109 bits (55), Expect = 4e-25
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 6 tttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataattacc 65
||||||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||
Sbjct: 99 tttaccgacggactaattccgtcggtgacaacaatgaaatccgtcggtgaaataattacc 40
Query: 66 gatggcttcaccgacggaacacgtccgtcagtata 100
|| ||| ||||| |||||||||||| ||| |||||
Sbjct: 39 gacggcctcacctacggaacacgtctgtcggtata 5
>54178_ptc-miRf12356-akr:pmrd
Length = 99
Score = 101 bits (51), Expect = 1e-22
Identities = 87/99 (87%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||| |||||||||| ||| |||||||||||||||||| |||||||||||||||
Sbjct: 1 gttttaccgatggactaattctgtcggtgacaggaatgaactccgtcggtgaaataatta 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtataat 102
| || || |||| ||| |||||| |||||| |||||||
Sbjct: 61 ctgacagcctcactgacagaacacatccgtcggtataat 99
>52517_ptc-miRf10695-akr:pmrd
Length = 104
Score = 101 bits (51), Expect = 1e-22
Identities = 87/99 (87%)
Strand = Plus / Minus
Query: 2 cagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataat 61
||||||||||||||||||||||||||| ||||||| |||| | ||| ||||||||| ||
Sbjct: 103 cagttttaccgacggactaattccgtcggtgacagcaatgcaatccgtcggtgaaacaaa 44
Query: 62 taccgatggcttcaccgacggaacacgtccgtcagtata 100
|||||| ||| |||| |||||||||||| |||| |||||
Sbjct: 43 taccgacggcatcacagacggaacacgttcgtcggtata 5
>53254_ptc-miRf11432-akr:pmrd
Length = 98
Score = 97.6 bits (49), Expect = 2e-21
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
||||||||||||||||||||||||| ||||||| |||| | ||| ||||||||| || ||
Sbjct: 1 gttttaccgacggactaattccgtcggtgacagcaatgcaatccgtcggtgaaacaaata 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtata 100
|||| ||| |||| |||||||||||| |||| |||||
Sbjct: 61 ccgacggcatcacagacggaacacgttcgtcggtata 97
>54297_ptc-miRf12475-akr:pmrd
Length = 104
Score = 93.7 bits (47), Expect = 2e-20
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 2 cagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataat 61
|||||||||||||||| |||||||||| ||||||| |||||| ||| ||||||||| |
Sbjct: 103 cagttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaa 44
Query: 62 taccgatggcttcaccgacggaa 84
|||||| ||||||||||||||||
Sbjct: 43 taccgacggcttcaccgacggaa 21
>53882_ptc-miRf12060-akr:pmrd
Length = 104
Score = 93.7 bits (47), Expect = 2e-20
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 2 cagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataat 61
|||||||||||||||| |||||||||| ||||||| |||||| ||| ||||||||| |
Sbjct: 103 cagttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaa 44
Query: 62 taccgatggcttcaccgacggaa 84
|||||| ||||||||||||||||
Sbjct: 43 taccgacggcttcaccgacggaa 21
>53526_ptc-miRf11704-akr:pmrd
Length = 98
Score = 89.7 bits (45), Expect = 4e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| ||||||| |||||| ||| ||||||||| | ||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 64 ccgatggcttcaccgacggaa 84
|||| ||||||||||||||||
Sbjct: 61 ccgacggcttcaccgacggaa 81
>53027_ptc-miRf11205-akr:pmrd
Length = 98
Score = 89.7 bits (45), Expect = 4e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| ||||||| |||||| ||| ||||||||| | ||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 64 ccgatggcttcaccgacggaa 84
|||| ||||||||||||||||
Sbjct: 61 ccgacggcttcaccgacggaa 81
>52130_ptc-miRf10308-akr:pmrd
Length = 108
Score = 89.7 bits (45), Expect = 4e-19
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 5 ttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataattac 64
|||||||||||||||||||| ||| |||| ||| ||||||||| | || ||||| ||| |
Sbjct: 5 ttttaccgacggactaattctgtcggtgataggcatgaactccgttggagaaattattcc 64
Query: 65 cgatggcttcaccgacggaacacgtccgtcagtataatagt 105
||| || |||| |||||||| ||||||||| ||||||||||
Sbjct: 65 cgacggtttcatcgacggaatacgtccgtcggtataatagt 105
>53270_ptc-miRf11448-akr:pmrd
Length = 99
Score = 85.7 bits (43), Expect = 6e-18
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| |||| || |||||||||| ||||||||| | ||
Sbjct: 1 gttttaccgacggattaattccgtcggtgatagcaatgaactccgtcggtgaaaacaata 60
Query: 64 ccgatggcttcaccgacggaacacgtc 90
|||| || |||||||||||| ||||||
Sbjct: 61 ccgacggattcaccgacggatcacgtc 87
>52114_ptc-miRf10292-akr:pmrd
Length = 99
Score = 85.7 bits (43), Expect = 6e-18
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| |||| || |||||||||| ||||||||| | ||
Sbjct: 1 gttttaccgacggattaattccgtcggtgatagcaatgaactccgtcggtgaaaacaata 60
Query: 64 ccgatggcttcaccgacggaacacgtc 90
|||| || |||||||||||| ||||||
Sbjct: 61 ccgacggattcaccgacggatcacgtc 87
>53887_ptc-miRf12065-akr:pmrd
Length = 102
Score = 83.8 bits (42), Expect = 2e-17
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 3 agttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatt 62
|||||||||||||||||||||||||| |||| ||| |||| |||| ||||| |||| |||
Sbjct: 2 agttttaccgacggactaattccgtcggtgaaaggcatgacctccgtcggtaaaattatt 61
Query: 63 accgatggcttcaccgacggaa 84
||||| || ||||||||||||
Sbjct: 62 accgacggtctcaccgacggaa 83
>53326_ptc-miRf11504-akr:pmrd
Length = 93
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 7 ttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataattaccg 66
||||||||||| |||||||||| ||||||| |||||| ||| ||||||||| | |||||
Sbjct: 93 ttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaataccg 34
Query: 67 atggcttcaccgacggaa 84
| ||||||||||||||||
Sbjct: 33 acggcttcaccgacggaa 16
>52673_ptc-miRf10851-akr:pmrd
Length = 99
Score = 83.8 bits (42), Expect = 2e-17
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
||||||||||||||||||||||||| ||||||| |||||| ||| ||||| ||| | ||
Sbjct: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtataa 101
|||| || || |||||||| |||||||||| ||||||
Sbjct: 61 ccgacggactcgccgacggatcacgtccgtcggtataa 98
>54104_ptc-miRf12282-akr:pmrd
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 78/91 (85%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| ||||||| |||| | ||| ||||||||| | ||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgcaatccgtcggtgaaaacaata 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtc 94
| ||||| |||| |||||||||||||||||
Sbjct: 61 cagatggactcactgacggaacacgtccgtc 91
>53345_ptc-miRf11523-akr:pmrd
Length = 104
Score = 77.8 bits (39), Expect = 1e-15
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 2 cagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataat 61
|||||||||||||||| |||||||||| |||| || |||||| ||| ||||||||| |
Sbjct: 103 cagttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaa 44
Query: 62 taccgatggcttcaccgacggaa 84
|||||| || |||||||||||||
Sbjct: 43 taccgacggattcaccgacggaa 21
>52912_ptc-miRf11090-akr:pmrd
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| | |||||||| ||||||| |||||| ||| ||||||||| | ||
Sbjct: 1 gttttaccgacggaatcattccgtcggtgacagtaatgaaatccgtcggtgaaaataata 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtataat 102
|| | || ||||||||||||| |||||||| |||||||
Sbjct: 61 ccaacggaatcaccgacggaacccgtccgtcggtataat 99
>51991_ptc-miRf10169-akr:pmrd
Length = 99
Score = 77.8 bits (39), Expect = 1e-15
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
||||||||||||||||||||| ||| || ||||| ||||||||| |||||||||| |||
Sbjct: 1 gttttaccgacggactaattctgtcggtaacaggcatgaactccgtcggtgaaattattc 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtataat 102
|||| || |||| ||||||| | | ||||| |||||||
Sbjct: 61 ccgacggtctcactgacggaataagaccgtcggtataat 99
>53262_ptc-miRf11440-akr:pmrd
Length = 104
Score = 75.8 bits (38), Expect = 6e-15
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 2 cagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataat 61
|||||||||||||||| |||||||||| |||| || |||||| ||| ||||||||| |
Sbjct: 103 cagttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaa 44
Query: 62 taccgatggcttcaccgacgga 83
|||||| || ||||||||||||
Sbjct: 43 taccgacggattcaccgacgga 22
>53194_ptc-miRf11372-akr:pmrd
Length = 104
Score = 75.8 bits (38), Expect = 6e-15
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 2 cagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataat 61
|||||||||||||||| |||||||||| |||| || |||||| ||| ||||||||| |
Sbjct: 103 cagttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaa 44
Query: 62 taccgatggcttcaccgacgga 83
|||||| || ||||||||||||
Sbjct: 43 taccgacggattcaccgacgga 22
>52376_ptc-miRf10554-akr:pmrd
Length = 99
Score = 75.8 bits (38), Expect = 6e-15
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| ||||||| |||||| ||| ||||||||| | ||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtataa 101
||| || ||||| ||||| |||||||||| ||||||
Sbjct: 61 tcgacggactcaccaacggatcacgtccgtcggtataa 98
>54335_ptc-miRf12513-akr:pmrd
Length = 99
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| ||||||| |||||| ||| ||||||||| | ||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 40
Query: 64 ccgatggcttcaccgacggaa 84
|||| || ||||||||||||
Sbjct: 39 ccgacggactcaccgacggaa 19
>52858_ptc-miRf11036-akr:pmrd
Length = 99
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| ||||||| |||||| ||| ||||||||| | ||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 40
Query: 64 ccgatggcttcaccgacggaa 84
|||| || ||||||||||||
Sbjct: 39 ccgacggactcaccgacggaa 19
>52088_ptc-miRf10266-akr:pmrd
Length = 99
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| |||| | ||||| ||| ||||||||| || ||
Sbjct: 1 gttttaccgacggattaattccgtcggtgataaacatgaaatccgtcggtgaaagaaata 60
Query: 64 ccgatggcttcaccgacggaa 84
|||| ||||||||||||||||
Sbjct: 61 ccgacggcttcaccgacggaa 81
>51848_ptc-miRf10026-akr:pmrd
Length = 99
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| ||||||||| |||| || ||||| ||| ||||||||| || ||
Sbjct: 1 gttttaccgacggattaattccgttggtgatagccatgaaatccgtcggtgaaagaaata 60
Query: 64 ccgatggcttcaccgacggaa 84
|||| ||||||||||||||||
Sbjct: 61 ccgacggcttcaccgacggaa 81
>54061_ptc-miRf12239-akr:pmrd
Length = 104
Score = 69.9 bits (35), Expect = 3e-13
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 2 cagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataat 61
|||||||||||||||| ||||||| || |||| || |||||| ||| ||||||||| |
Sbjct: 103 cagttttaccgacggattaattccatcggtgaaagcaatgaaatccgtcggtgaaaacaa 44
Query: 62 taccgatggcttcaccgacggaa 84
|||||| || |||||||||||||
Sbjct: 43 taccgacggattcaccgacggaa 21
>53106_ptc-miRf11284-akr:pmrd
Length = 104
Score = 69.9 bits (35), Expect = 3e-13
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 2 cagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataat 61
||||||||| |||||| |||||||||| ||||||| |||||| || ||||||||| |
Sbjct: 103 cagttttactgacggattaattccgtcggtgacagcaatgaaatctgtcggtgaaaacaa 44
Query: 62 taccgatggcttcaccgacggaa 84
|||||| || |||||||||||||
Sbjct: 43 taccgacggattcaccgacggaa 21
>52831_ptc-miRf11009-akr:pmrd
Length = 105
Score = 69.9 bits (35), Expect = 3e-13
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 2 cagttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataat 61
|||||||||||||||| |||||||||| |||||| ||| || ||| ||||||||| |
Sbjct: 104 cagttttaccgacggattaattccgtcggtgacaacaattaaatccgtcggtgaaaacaa 45
Query: 62 taccgatggcttcaccgacggaa 84
|||||| || |||||||||||||
Sbjct: 44 taccgacggattcaccgacggaa 22
>53487_ptc-miRf11665-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| | |||||||| ||||||| |||||| ||| ||||||||| | ||
Sbjct: 99 gttttaccgacggattcattccgtcggtgacagcaatgaaatccgtcggtgaaaataata 40
Query: 64 ccgatggcttcaccgacggaac 85
|||| || |||||||||||||
Sbjct: 39 ccgacggactcaccgacggaac 18
>52637_ptc-miRf10815-akr:pmrd
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaa 57
|||||||||||||| |||||||||| ||||||| |||||| ||| |||||||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 accgacggaacacgtccgtc 94
||||||||||||||||||||
Sbjct: 60 accgacggaacacgtccgtc 79
>52619_ptc-miRf10797-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| | |||||||| ||||||| |||||| ||| ||||||||| | ||
Sbjct: 1 gttttaccgacggattcattccgtcggtgacagcaatgaaatccgtcggtgaaaataata 60
Query: 64 ccgatggcttcaccgacggaac 85
|||| || |||||||||||||
Sbjct: 61 ccgacggactcaccgacggaac 82
>52483_ptc-miRf10661-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||||| |||| ||| ||||||| |||||| ||| ||||||||| ||
Sbjct: 1 gttttaccgacggactcattctgtcggtgacagcaatgaaatccgtcggtgaaaatcata 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtataa 101
|||| || |||||||| ||||| ||||||| ||||||
Sbjct: 61 ccgacggactcaccgacagaacatgtccgtcggtataa 98
>52325_ptc-miRf10503-akr:pmrd
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaa 57
|||||||||||||| |||||||||| ||||||| |||||| ||| |||||||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 75 accgacggaacacgtccgtc 94
||||||||||||||||||||
Sbjct: 60 accgacggaacacgtccgtc 79
>53681_ptc-miRf11859-akr:pmrd
Length = 99
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| |||| || |||||| ||| ||||||||| | ||
Sbjct: 99 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaacaata 40
Query: 64 ccgatggcttcaccgacggaa 84
|||| || ||||||||||||
Sbjct: 39 ccgacggactcaccgacggaa 19
>52229_ptc-miRf10407-akr:pmrd
Length = 95
Score = 61.9 bits (31), Expect = 9e-11
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 6 tttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataattacc 65
|||||||||| |||||||||| |||| || ||||| ||| ||||||||| || ||||
Sbjct: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
Query: 66 gatggcttcaccgacggaa 84
|| ||||||||||||||||
Sbjct: 61 gacggcttcaccgacggaa 79
>53918_ptc-miRf12096-akr:pmrd
Length = 99
Score = 60.0 bits (30), Expect = 3e-10
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaa 57
|||||||||||||| |||||||||| ||||||| |||||| ||| | |||||||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgttggtgaaa 46
>52330_ptc-miRf10508-akr:pmrd
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaa 57
|||||||||||||||| |||||||| ||||||| ||||| ||| |||||||||
Sbjct: 1 gttttaccgacggactcattccgtcggtgacagcaatgacatccgtcggtgaaa 54
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 accgacggaacacgtccgtcagtataa 101
|||||||||||||||||||| ||||||
Sbjct: 60 accgacggaacacgtccgtcggtataa 86
>52264_ptc-miRf10442-akr:pmrd
Length = 99
Score = 60.0 bits (30), Expect = 3e-10
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
|||||||||||||| |||||||||| ||||||| | |||| ||| ||||| ||| | ||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcattgaaatccgtcggtaaaaacaata 60
Query: 64 ccgatggcttcaccgacggaacacgtccgtcagtataa 101
|||| | | ||||||||| |||||||||| ||||||
Sbjct: 61 ccgacgaaattaccgacggatcacgtccgtcggtataa 98
>53438_ptc-miRf11616-akr:pmrd
Length = 99
Score = 56.0 bits (28), Expect = 5e-09
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
||||||||||||| | |||||||| |||| || ||| |||||| ||||||||| | ||
Sbjct: 99 gttttaccgacgggttcattccgtcggtgatagcaattaactccgtcggtgaaaacaata 40
Query: 64 ccgatggcttcaccgacgga 83
|||| || ||||||||||||
Sbjct: 39 ccgacggattcaccgacgga 20
>53620_ptc-miRf11798-akr:pmrd
Length = 98
Score = 52.0 bits (26), Expect = 8e-08
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaa 57
|||||||||||||| ||||||||| ||||||| |||||| ||| |||||||||
Sbjct: 98 gttttaccgacggattaattccgt-ggtgacagcaatgaaatccgtcggtgaaa 46
>52057_ptc-miRf10235-akr:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 47 catcggtgaaataattaccgatggcttcaccgacggaacacgtccgtc 94
||||||||| || ||||||||| ||||||||||||| |||||||||
Sbjct: 57 catcggtgatttatttaccgatgtcttcaccgacggattacgtccgtc 10
>53978_ptc-miRf12156-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 agttttaccgacggactaattccgtc 28
|||||||||||||||| |||||||||
Sbjct: 101 agttttaccgacggacaaattccgtc 76
>53644_ptc-miRf11822-akr:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 8 taccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaa 57
|||||||||||| |||||||| |||| || |||| | ||| |||||||||
Sbjct: 91 taccgacggactcattccgtcggtgaaagcaatgcaatccgtcggtgaaa 42
>52732_ptc-miRf10910-akr:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 8 taccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaa 57
|||||||||||| |||||||| |||| || |||| | ||| |||||||||
Sbjct: 91 taccgacggactcattccgtcggtgaaagcaatgcaatccgtcggtgaaa 42
>52594_ptc-miRf10772-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 agttttaccgacggactaattccgtc 28
|||||||||||||||| |||||||||
Sbjct: 101 agttttaccgacggacaaattccgtc 76
>52479_ptc-miRf10657-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 3 agttttaccgacggactaattccgtcagtg 32
|||||||||||||||| ||||||||||||
Sbjct: 101 agttttaccgacggacatattccgtcagtg 72
>52463_ptc-miRf10641-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 3 agttttaccgacggactaattccgtc 28
|||||||||||||||| |||||||||
Sbjct: 101 agttttaccgacggacaaattccgtc 76
>52296_ptc-miRf10474-akr:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 agttttaccgacggactaattccgtc 28
||||||||||||||| ||||||||||
Sbjct: 1 agttttaccgacggattaattccgtc 26
>52492_ptc-miRf10670-akr:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 taccgacggactaattccgtc 28
|||||||||||||||||||||
Sbjct: 75 taccgacggactaattccgtc 95
>52197_ptc-miRf10375-akr:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 5 ttttaccgacggactaattccgtcagtgacaggaatgaactccatcggt 53
||||||||||||| |||||||||| ||| ||| ||||| ||| |||||
Sbjct: 99 ttttaccgacggattaattccgtcggtgtaaggcatgaaatccgtcggt 51
