miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 139 bits (70), Expect = 3e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 66
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 67 ccgggccgggtttaataa 84
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 139 bits (70), Expect = 3e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 10 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 69
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 70 ccgggccgggtttaataa 87
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 139 bits (70), Expect = 3e-34
Identities = 76/78 (97%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 4 ttaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccgggccg 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 10 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggccg 69
Query: 64 ggccgagtttaataa 78
||||| |||||||||
Sbjct: 70 ggccgggtttaataa 84
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 131 bits (66), Expect = 8e-32
Identities = 75/78 (96%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 11 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 70
Query: 61 ccgggccgagtttaataa 78
|||| ||| |||||||||
Sbjct: 71 ccggaccgggtttaataa 88
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 125 bits (63), Expect = 5e-30
Identities = 72/75 (96%)
Strand = Plus / Plus
Query: 4 ttaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccgggccg 63
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggttgacccgccgggccg 63
Query: 64 ggccgagtttaataa 78
||||| |||||||||
Sbjct: 64 ggccgggtttaataa 78
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 123 bits (62), Expect = 2e-29
Identities = 74/78 (94%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 10 ttattaaacccggaccggtccagccaccgggtcgatcgggtcccgggtcgacccgccggg 69
Query: 61 ccgggccgagtttaataa 78
||||| || |||||||||
Sbjct: 70 ccgggtcgggtttaataa 87
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 4 ttaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccgggccg 63
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgagtcccgggtcgacccgccgggctg 63
Query: 64 ggccgagtttaataa 78
||||| |||||||||
Sbjct: 64 ggccgggtttaataa 78
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 117 bits (59), Expect = 1e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 4 ttaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccgggccg 63
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 10 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggcca 69
Query: 64 ggccgagtttaataa 78
| ||| |||||||||
Sbjct: 70 gaccgggtttaataa 84
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 117 bits (59), Expect = 1e-27
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 5 taaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccgggccgg 64
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 11 taaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggccgg 70
Query: 65 gccgagtttaa 75
||| ||||||
Sbjct: 71 tccgggtttaa 81
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 115 bits (58), Expect = 5e-27
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccactgggtcgatcgggtcccgggtcgacccgccggg 60
Query: 61 ccgggccgagtttaataa 78
|||| ||| |||||||||
Sbjct: 61 ccggaccgggtttaataa 78
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 107 bits (54), Expect = 1e-24
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct: 8 ttattaaacccggaccg-tccagcgaccgggtcgatcgggtcccgggtcgacccgccggg 66
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 67 ccgggccgggtttaataa 84
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 107 bits (54), Expect = 1e-24
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 10 ttattaaacccggaccggtccagccaccgggtcgac-cggtcccgggtcgacccgccggc 68
Query: 61 ccgggccgagtttaataa 78
| |||||| |||||||||
Sbjct: 69 ctgggccgggtttaataa 86
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||
Sbjct: 10 ttattaaacccggaccggtccagccactgggtcgaccgggtcccgggtcgactcgccggg 69
Query: 61 ccgggccgagtttaataa 78
|| ||||| || ||||||
Sbjct: 70 ccaggccgggtgtaataa 87
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 107 bits (54), Expect = 1e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||| ||||| |||||| || |||||| ||||||
Sbjct: 4 ttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccggg 63
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 64 ccgggccgggtttaataa 81
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 99.6 bits (50), Expect = 3e-22
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 5 taaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccgggccgg 64
|||||||||||||||||||||||||| ||||| |||||||||||||||||| ||| |||
Sbjct: 11 taaacccggaccggtccagccaccggatcgaccaggtcccgggtcgacccgctgggtcgg 70
Query: 65 gccgagtttaataa 78
|||| |||||||||
Sbjct: 71 gccgggtttaataa 84
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||||||||| || |||| |||| ||||||||||
Sbjct: 10 ttattaaacccggaccggtccagccaccgggtcgaccggatcccaggtctacccgccggg 69
Query: 61 ccgggccgagtttaataa 78
|||| || |||||||||
Sbjct: 70 ccggaccaggtttaataa 87
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 99.6 bits (50), Expect = 3e-22
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||||||| ||| |||||||| ||||||| || ||
Sbjct: 81 ttattaaacccggaccggtccagccaccgggttgaccgggtcccgattcgacccaccagg 22
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 21 ccgggccgggtttaataa 4
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 91.7 bits (46), Expect = 7e-20
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||| ||||||||||| ||| || ||| ||||||||| |
Sbjct: 78 ttattaaacccggaccggtccagctaccgggtcgaccaggttccaggttgacccgccgag 19
Query: 61 ccgggccgagtttaataa 78
||| ||||||||||||||
Sbjct: 18 ccgagccgagtttaataa 1
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 87.7 bits (44), Expect = 1e-18
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 27 ccgggtcgactgggtcccgggtcgacccgccgggccgggccgagtttaataa 78
|||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 55 ccgggtcgaccgggtcccgggtcgacccgccgggccgggccgggtttaataa 4
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 85.7 bits (43), Expect = 4e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccggg 47
|||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 85.7 bits (43), Expect = 4e-18
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccggg 47
|||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 72 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 26
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 85.7 bits (43), Expect = 4e-18
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccggg 47
|||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 79 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 33
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 75.8 bits (38), Expect = 4e-15
Identities = 67/78 (85%), Gaps = 9/78 (11%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 4 ttattaaacccgaaccggtccagccaccgggt---------cccgggtcgacccgccggg 54
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 55 ccgggccgggtttaataa 72
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgact 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 65 ttattaaacccggaccggtccagccaccgggtcgact 29
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
|||||||||| |||||||||||||| |||||||||
Sbjct: 39 ccgggtcgacttgccgggccgggccgggtttaataa 4
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 6 aaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccgggccggg 65
||||||| |||||||||| |||||||| | |||||||| ||||||||||||||||||
Sbjct: 73 aaacccgaaccggtccaggtcccgggtcggccgggtcccgagtcgacccgccgggccggt 14
Query: 66 ccgagtttaataa 78
||| |||||||||
Sbjct: 13 ccgggtttaataa 1
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
||||||||||||||||||||||||||||||||||||
Sbjct: 10 ttattaaacccggaccggtccagccaccgggtcgac 45
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
||||||||||||||||||||||||||||||||||||
Sbjct: 36 ccgggtcgacccgccgggccgggccgagtttaataa 71
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
||||||||||||||||||||||||||||||||||||
Sbjct: 8 ttattaaacccggaccggtccagccaccgggtcgac 43
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
||||||||||||||||| ||||||||||||||||||
Sbjct: 34 ccgggtcgacccgccggaccgggccgagtttaataa 69
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
||||||||||||||||||||||||||||||||||||
Sbjct: 69 ttattaaacccggaccggtccagccaccgggtcgac 34
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
||||||||||| || ||||||||||| |||||||||
Sbjct: 43 ccgggtcgacctgctgggccgggccgggtttaataa 8
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
||||||||||||||||||||||||||||||||||||
Sbjct: 7 ttattaaacccggaccggtccagccaccgggtcgac 42
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
||||||||||||||| |||||||||| |||||||||
Sbjct: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
||||||||||||||||||||||||||||||||||||
Sbjct: 7 ttattaaacccggaccggtccagccaccgggtcgac 42
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
|||||||||||||||||||||||||| |||||||||
Sbjct: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
|||||||||||||||||||||||||| |||||||||
Sbjct: 27 ccgggtcgacccgccgggccgggccgggtttaataa 62
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
|||||||||||||||||||||||||| |||||||||
Sbjct: 27 ccgggtcgacccgccgggccgggccgggtttaataa 62
>51920_ptc-miRf10098-akr:pmrd
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 5 taaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccgggccgg 64
||||||||||||||||| || || |||||||| |||||||| |||||||| |||||||||
Sbjct: 75 taaacccggaccggtccggctactgggtcgaccgggtcccgagtcgacccaccgggccgg 16
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 27 ccgggtcgactgggtcccgggtcgacccgccgggccgg 64
|||||||||| |||||||||||||||||||||||||||
Sbjct: 90 ccgggtcgaccgggtcccgggtcgacccgccgggccgg 127
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 42 cccgggtcgacccgccggg 60
|||||||||||||||||||
Sbjct: 6 cccgggtcgacccgccggg 24
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 67.9 bits (34), Expect = 1e-12
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 5 taaacccggaccggtccagccaccgggtcgactgggtcccgggtcg 50
||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 78 taaacccagaccggtccagccaccgggtcgatcgggtcccgggtcg 123
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtc 33
|||||||||||||||||||||||||||||||||
Sbjct: 7 ttattaaacccggaccggtccagccaccgggtc 39
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 4 ttaaacccggaccggtccagccaccgggtcgac 36
|||||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgac 36
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
|||||||||||||||||||||||||| |||||||||
Sbjct: 27 ccgggtcgacccgccgggccgggccgggtttaataa 62
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtc 33
|||||||||||||||||||||||||||||||||
Sbjct: 7 ttattaaacccggaccggtccagccaccgggtc 39
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 gccgggccgggccgagtttaataa 78
|||||||||||||| |||||||||
Sbjct: 44 gccgggccgggccgggtttaataa 67
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtc 33
|||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtc 33
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
||||||| ||| |||||||||||||| |||||||||
Sbjct: 27 ccgggtcaacctgccgggccgggccgggtttaataa 62
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
|||||||||||||||||||||| |||||||||||||
Sbjct: 65 ttattaaacccggaccggtccaaccaccgggtcgac 30
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
||||||||||| |||||||||||||| |||||||||
Sbjct: 39 ccgggtcgacctgccgggccgggccgggtttaataa 4
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 44 cgggtcgacccgccgggccgggccgagtttaataa 78
||||||||||||||||||||||||| |||||||||
Sbjct: 32 cgggtcgacccgccgggccgggccgggtttaataa 66
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgg 30
||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgg 30
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 44 cgggtcgacccgccgggccgggccgagtttaataa 78
||||||||||||||||||||||||| |||||||||
Sbjct: 38 cgggtcgacccgccgggccgggccgggtttaataa 4
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgg 30
||||||||||||||||||||||||||||||
Sbjct: 69 ttattaaacccggaccggtccagccaccgg 40
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 60.0 bits (30), Expect = 2e-10
Identities = 65/78 (83%), Gaps = 9/78 (11%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||||||||||||||||||| |||||||||||||||| || ||
Sbjct: 75 ttattaaacccggaccggtccagccacc---------aggtcccgggtcgacccaccagg 25
Query: 61 ccgggccgagtttaataa 78
|||||||| |||||||||
Sbjct: 24 ccgggccgggtttaataa 7
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 58.0 bits (29), Expect = 9e-10
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 6 aaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccgggccggg 65
||||||| |||||||||||||| || || |||||||||||||||| |||||||||
Sbjct: 82 aaacccgaaccggtccagccactaggataaccgggtcccgggtcgacctgccgggccgat 23
Query: 66 ccgagtttaataa 78
||| |||||||||
Sbjct: 22 ccgggtttaataa 10
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtc 33
|||||||||||||||||||| ||||||||||||
Sbjct: 4 ttattaaacccggaccggtctagccaccgggtc 36
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 45 gggtcgacccgccgggccgggccgagtttaataa 78
|||||||||||||||||||| ||| |||||||||
Sbjct: 39 gggtcgacccgccgggccggaccgggtttaataa 72
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 taaacccggaccggtccagccaccgggtc 33
|||||||||||||||||||||||||||||
Sbjct: 11 taaacccggaccggtccagccaccgggtc 39
>53131_ptc-miRf11309-akr:pmrd
Length = 56
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtc 33
|||||||||||||||||||||||||||| ||||
Sbjct: 1 ttattaaacccggaccggtccagccacccggtc 33
>54004_ptc-miRf12182-akr:pmrd
Length = 127
Score = 56.0 bits (28), Expect = 4e-09
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 6 aaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccgggc 61
||||||| |||||||||||| |||||||| | ||||| |||||| || ||||||||
Sbjct: 72 aaacccgaaccggtccagcccccgggtcggccgggtctcgggtcaactcgccgggc 127
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
|||||||||||||||||||| ||||||||| |||||
Sbjct: 4 ttattaaacccggaccggtctagccaccggatcgac 39
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
|||| ||||||||||||||||||||| |||||||||
Sbjct: 30 ccggatcgacccgccgggccgggccgggtttaataa 65
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggt 32
||||||||||| ||||||||||||||||||||
Sbjct: 67 ttattaaacccagaccggtccagccaccgggt 98
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 54.0 bits (27), Expect = 1e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 6 aaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgc 56
|||| |||||||||||||||| ||||||||| |||| || ||||||||||
Sbjct: 11 aaactcggaccggtccagccatcgggtcgaccgggttccaagtcgacccgc 61
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 54.0 bits (27), Expect = 1e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccggg 47
|||||||||||||||||||| ||| ||||| ||||| |||| |||||
Sbjct: 4 ttattaaacccggaccggtctagctaccggatcgaccgggttccggg 50
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 56 ccgggccgggccgagtttaataa 78
||||||||||||| |||||||||
Sbjct: 46 ccgggccgggccgggtttaataa 68
>52317_ptc-miRf10495-akr:pmrd
Length = 125
Score = 54.0 bits (27), Expect = 1e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 7 aacccggaccggtccagccaccgggtcgactgggtcccgggtcgacc 53
|||| ||| ||||||||||||||||| ||| |||||||| |||||||
Sbjct: 78 aaccaggaacggtccagccaccgggttgaccgggtcccgagtcgacc 124
>52059_ptc-miRf10237-akr:pmrd
Length = 97
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 6 aaacccggaccggtccagccaccgggtcgac 36
|||||||||| ||||||||||||||||||||
Sbjct: 42 aaacccggactggtccagccaccgggtcgac 12
>52818_ptc-miRf10996-akr:pmrd
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||| |||| ||||||||| | ||||| |||| | || || |||||| |||
Sbjct: 78 ttattaaacccgaaccgatccagccactgaatcgaccgggttctggatcaacccgctggg 19
Query: 61 ccgggccgagtttaataa 78
|||| ||| |||||||||
Sbjct: 18 ccggaccgggtttaataa 1
>52817_ptc-miRf10995-akr:pmrd
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
|||||||||||| |||| ||||||||| | ||||| |||| | || || |||||| |||
Sbjct: 78 ttattaaacccgaaccgatccagccactgaatcgaccgggttctggatcaacccgctggg 19
Query: 61 ccgggccgagtttaataa 78
|||| ||| |||||||||
Sbjct: 18 ccggaccgggtttaataa 1
>52133_ptc-miRf10311-akr:pmrd
Length = 122
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 22 agccaccgggtcgactgggtcccgggtcgacccgccgggc 61
|||||| |||||| | |||||||||||||||| |||||||
Sbjct: 46 agccactgggtcggccgggtcccgggtcgaccagccgggc 7
>52132_ptc-miRf10310-akr:pmrd
Length = 122
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 22 agccaccgggtcgactgggtcccgggtcgacccgccgggc 61
|||||| |||||| | |||||||||||||||| |||||||
Sbjct: 46 agccactgggtcggccgggtcccgggtcgaccagccgggc 7
>52876_ptc-miRf11054-akr:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 27 ccgggtcgactgggtcccgggtcgacccgccgggccgg 64
|||||||| | ||||| ||||||||||||||| |||||
Sbjct: 48 ccgggtcggccgggtctcgggtcgacccgccgagccgg 85
>52543_ptc-miRf10721-akr:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 43 ccgggtcgacccgccgggccgg 64
||||||||||||||||||||||
Sbjct: 25 ccgggtcgacccgccgggccgg 4
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 14 accggtccagccaccgggtcgac 36
||||||||| |||||||||||||
Sbjct: 38 accggtccaaccaccgggtcgac 16
>52391_ptc-miRf10569-akr:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 acccggaccggtccagccaccg 29
||||||||||||||||||||||
Sbjct: 38 acccggaccggtccagccaccg 17
>52233_ptc-miRf10411-akr:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 10 ccggaccggtccagccaccgggtcga 35
||||||||||||||||||| ||||||
Sbjct: 46 ccggaccggtccagccaccaggtcga 21
>54211_ptc-miRf12389-akr:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ggaccggtccagccaccgggt 32
|||||||||||||||||||||
Sbjct: 68 ggaccggtccagccaccgggt 88
>52238_ptc-miRf10416-akr:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 46 ggtcgacccgccgggccgggc 66
|||||||||||||||||||||
Sbjct: 25 ggtcgacccgccgggccgggc 5
>53762_ptc-miRf11940-akr:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 43 ccgggtcgacccgccgggcc 62
||||||||||||||||||||
Sbjct: 94 ccgggtcgacccgccgggcc 113
>52252_ptc-miRf10430-akr:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 19 tccagccaccgggtcgactgggtcccgggtcgaccc 54
|||||| ||||||| ||| | |||||||||||||||
Sbjct: 78 tccagctaccgggttgaccgagtcccgggtcgaccc 113
>52940_ptc-miRf11118-akr:pmrd
Length = 120
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 42 cccgggtcgacccgccggg 60
|||||||||||||||||||
Sbjct: 2 cccgggtcgacccgccggg 20
>51943_ptc-miRf10121-akr:pmrd
Length = 120
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 42 cccgggtcgacccgccggg 60
|||||||||||||||||||
Sbjct: 2 cccgggtcgacccgccggg 20
>51942_ptc-miRf10120-akr:pmrd
Length = 120
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 42 cccgggtcgacccgccggg 60
|||||||||||||||||||
Sbjct: 2 cccgggtcgacccgccggg 20
