miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 133 bits (67), Expect = 2e-32
Identities = 73/75 (97%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccggg 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgag 63
Query: 61 tttaataacagtgcc 75
|||||||||||||||
Sbjct: 64 tttaataacagtgcc 78
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccggg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccggg 60
Query: 61 tttaataac 69
|||||||||
Sbjct: 61 tttaataac 69
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 123 bits (62), Expect = 2e-29
Identities = 71/74 (95%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccggg 60
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
Sbjct: 2 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccggaccgggccgag 61
Query: 61 tttaataacagtgc 74
||||||||||||||
Sbjct: 62 tttaataacagtgc 75
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 115 bits (58), Expect = 4e-27
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccggg 60
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 75 ggtcttttattaaacccggaccggtccagccaccgggtcgacctgctgggccgggccggg 16
Query: 61 tttaataaca 70
||||||||||
Sbjct: 15 tttaataaca 6
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccgggtttaat 66
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 60
Query: 67 aa 68
||
Sbjct: 61 aa 62
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccgggtttaat 66
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 60
Query: 67 aa 68
||
Sbjct: 61 aa 62
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 111 bits (56), Expect = 7e-26
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccgggttt 63
||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
Query: 64 aataacag 71
||||||||
Sbjct: 61 aataacag 68
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 111 bits (56), Expect = 7e-26
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccgggttt 63
||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||
Sbjct: 68 cttttattaaacccggaccggtccaaccaccgggtcgacctgccgggccgggccgggttt 9
Query: 64 aataacag 71
||||||||
Sbjct: 8 aataacag 1
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 109 bits (55), Expect = 3e-25
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtcgacccgccaggccgggccgggtttaataa 68
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaataa 62
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 105 bits (53), Expect = 4e-24
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccgggttt 63
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 68 cttttattaaacccggaccggtccagccaccgggtcgacttgccgggccgggccgggttt 9
Query: 64 aataa 68
|||||
Sbjct: 8 aataa 4
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 101 bits (51), Expect = 7e-23
Identities = 67/72 (93%), Gaps = 4/72 (5%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgg----gtcgacccgccaggccgggccgg 59
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 72 cttttattaaacccggaccggtccagccaccggtcgggtcgacccgccgggccgggccgg 13
Query: 60 gtttaataacag 71
||||||||||||
Sbjct: 12 gtttaataacag 1
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 101 bits (51), Expect = 7e-23
Identities = 73/81 (90%), Gaps = 7/81 (8%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccacc-------gggtcgacccgccaggccg 53
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 81 ggtcttttattaaacccggaccggtccagccaccaggtcccgggtcgacccaccaggccg 22
Query: 54 ggccgggtttaataacagtgc 74
|||||||||||||||||||||
Sbjct: 21 ggccgggtttaataacagtgc 1
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 99.6 bits (50), Expect = 3e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccgggtttaat 66
||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcaacctgccgggccgggccgggtttaat 60
Query: 67 aa 68
||
Sbjct: 61 aa 62
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 97.6 bits (49), Expect = 1e-21
Identities = 69/75 (92%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccg---ccaggccgggcc 57
||||||||||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 60
Query: 58 gggtttaataacagt 72
||||||||||||||
Sbjct: 61 aggtttaataacagt 75
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 97.6 bits (49), Expect = 1e-21
Identities = 69/75 (92%), Gaps = 3/75 (4%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccg---ccaggccgggcc 57
||||||||||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 78 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 19
Query: 58 gggtttaataacagt 72
||||||||||||||
Sbjct: 18 aggtttaataacagt 4
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 97.6 bits (49), Expect = 1e-21
Identities = 69/75 (92%), Gaps = 3/75 (4%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccg---ccaggccgggcc 57
||||||||||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 85 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 26
Query: 58 gggtttaataacagt 72
||||||||||||||
Sbjct: 25 aggtttaataacagt 11
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 89.7 bits (45), Expect = 3e-19
Identities = 61/66 (92%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgg----gtcgacccgccaggccgggccgggtt 62
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccggtcgggtcgacccgccgggccgggccgggtt 60
Query: 63 taataa 68
||||||
Sbjct: 61 taataa 66
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 89.7 bits (45), Expect = 3e-19
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccgggt 61
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 2 gtcttttattaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggt 60
Query: 62 ttaataacagtgc 74
|||||||||||||
Sbjct: 61 ttaataacagtgc 73
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 46
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
||||||||||||||| ||||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataa 84
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 46
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataac 69
||||||||||||||| |||||||||||||||||||||
Sbjct: 52 ccgggtcgacccgccgggccgggccgggtttaataac 88
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 47
Score = 58.0 bits (29), Expect = 9e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataac 69
||||||||||||||| |||||| ||||||||||||||
Sbjct: 53 ccgggtcgacccgccgggccggaccgggtttaataac 89
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 81.8 bits (41), Expect = 6e-17
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcga 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcga 44
Score = 58.0 bits (29), Expect = 9e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataac 69
||||||||||||||| ||||||| |||||||||||||
Sbjct: 52 ccgggtcgacccgccgggccgggtcgggtttaataac 88
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/73 (87%), Gaps = 7/73 (9%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgg-------gtcgacccgccaggccgggc 56
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 1 cttttattaaacccgaaccggtccagccaccgggtcccgggtcgacccgccgggccgggc 60
Query: 57 cgggtttaataac 69
|||||||||||||
Sbjct: 61 cgggtttaataac 73
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 77.8 bits (39), Expect = 1e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttgttaaacccggaccggtccagccaccgggtcgacc 43
Score = 77.8 bits (39), Expect = 1e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataacagtgcc 75
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataacagtgcc 91
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 77.8 bits (39), Expect = 1e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttgttaaacccggaccggtccagccaccgggtcgacc 43
Score = 58.0 bits (29), Expect = 9e-10
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataacagtg 73
||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccagaccgggtttaataacagtg 89
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 75.8 bits (38), Expect = 4e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 6 tttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataac 69
||||||||||||||| | | |||||||||||||||||
Sbjct: 51 ccgggtcgacccgccggcctgggccgggtttaataac 87
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 75.8 bits (38), Expect = 4e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5 gtcttttattaaacccggaccggtccagccactgggtcgacc 46
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 1e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
||||||||||||||| ||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 73.8 bits (37), Expect = 1e-14
Identities = 65/75 (86%), Gaps = 7/75 (9%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccacc-------gggtcgacccgccaggccgggc 56
||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |
Sbjct: 1 cttttattaaacccggaccggtctagccaccgggtcttgggtcgacccgccgggccggac 60
Query: 57 cgggtttaataacag 71
|||||||||||||||
Sbjct: 61 cgggtttaataacag 75
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 1e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
||||||||||||||| ||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 1e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
||||||||||||||| ||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 73.8 bits (37), Expect = 1e-14
Identities = 63/71 (88%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacccg---ccaggccgggccggg 60
||||||||||||||||||||||| ||| ||||| |||||| | || ||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagctaccggatcgaccgggttccgggccgggccggg 60
Query: 61 tttaataacag 71
|||||||||||
Sbjct: 61 tttaataacag 71
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 1e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
||||||||||||||| ||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgac 42
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
||||||||||||||| |||||||||| |||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 cttttattaaacccggaccggtccagccaccggatcgacc 40
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 38 tcgacccgccaggccgggccgggtttaataacag 71
|||||| ||| |||||||||||||||||||||||
Sbjct: 51 tcgacctgccgggccgggccgggtttaataacag 84
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 84 cttttattaaacccggaccggtccagccaccgggttgacc 45
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 38 tcgacccgccaggccgggccgggtttaataacag 71
||||||| ||||||||||||||||||||||||||
Sbjct: 34 tcgacccaccaggccgggccgggtttaataacag 1
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 69.9 bits (35), Expect = 2e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1 ggtcttttagtaaacccggaccggtccagccaccggatcgacc 43
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
|||||||||||||| || |||||||||||||||||
Sbjct: 49 ccgggtcgacccgctgggtcgggccgggtttaataa 84
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 69.9 bits (35), Expect = 2e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 5 ttttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||||||||||
Sbjct: 5 ttttattaaacccggaccggtccagccaccgggtc 39
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 69.9 bits (35), Expect = 2e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataacag 71
||||||||||||||| |||||||||||||||||||||||
Sbjct: 39 ccgggtcgacccgccgggccgggccgggtttaataacag 1
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 9e-13
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacc 37
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
||||||||||||||| ||| ||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggctgggccgggtttaataa 78
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 9e-13
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacc 37
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
|||||| |||||||| ||||||||||||||||||||
Sbjct: 43 ccgggttgacccgccgggccgggccgggtttaataa 78
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataac 69
||||||||||||||| |||||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataac 85
Score = 58.0 bits (29), Expect = 9e-10
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcga 41
|||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 2 ggtcttttattaaacccggacc-gtccagcgaccgggtcga 41
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 taaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||
Sbjct: 11 taaacccggaccggtccagccaccgggtcgacc 43
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaa 65
||||||||||||||| |||||| ||||||||||
Sbjct: 49 ccgggtcgacccgccgggccggtccgggtttaa 81
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 65.9 bits (33), Expect = 4e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcga 41
||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 68 ggtcttttaataaacccagaccggtccagccaccgggtcga 108
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 65.9 bits (33), Expect = 4e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 3 tcttttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 63 tcttttattaaacccagaccggtccagccaccgggttgacc 103
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||| ||||||||||||
Sbjct: 78 ttattaaacccggaccggtccagctaccgggtcgacc 42
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcga 41
||||||||||||||||||||||||||| |||||||
Sbjct: 1 ttattaaacccggaccggtccagccactgggtcga 35
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
||||||||||||||| |||||| |||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccggaccgggtttaataa 78
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 ttttattaaacccggaccggtccagccaccgggtc 39
||||| |||||||||||||||||||||||||||||
Sbjct: 5 ttttagtaaacccggaccggtccagccaccgggtc 39
>52059_ptc-miRf10237-akr:pmrd
Length = 97
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 12 aaacccggaccggtccagccaccgggtcgacccg 45
|||||||||| |||||||||||||||||||||||
Sbjct: 42 aaacccggactggtccagccaccgggtcgacccg 9
>53131_ptc-miRf11309-akr:pmrd
Length = 56
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||| ||||
Sbjct: 1 ttattaaacccggaccggtccagccacccggtc 33
>52543_ptc-miRf10721-akr:pmrd
Length = 106
Score = 54.0 bits (27), Expect = 1e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 20 accggtccagccaccgggtcgacccgccaggccgg 54
||||||||| |||||||||||||||||| ||||||
Sbjct: 38 accggtccaaccaccgggtcgacccgccgggccgg 4
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 52.0 bits (26), Expect = 5e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||| |||| |||||||||||||||| ||||||||||
Sbjct: 1 gtcttttaacaaactcggaccggtccagccatcgggtcgacc 42
>52391_ptc-miRf10569-akr:pmrd
Length = 111
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 14 acccggaccggtccagccaccgggtcgacccgcc 47
|||||||||||||||||||||| || ||||||||
Sbjct: 38 acccggaccggtccagccaccgcgttgacccgcc 5
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 37 gtcgacccgccaggccgggccgggtttaataa 68
||||||||||| |||||| |||||||||||||
Sbjct: 32 gtcgacccgccgggccggtccgggtttaataa 1
>51920_ptc-miRf10098-akr:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 3e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 ttttattaaacccggaccggtccagccaccgggtcgacc 43
||||| ||||||||||||||||| || || |||||||||
Sbjct: 81 ttttagtaaacccggaccggtccggctactgggtcgacc 43
>52233_ptc-miRf10411-akr:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 ccggaccggtccagccaccgggtcga 41
||||||||||||||||||| ||||||
Sbjct: 46 ccggaccggtccagccaccaggtcga 21
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccac 33
||||||||| ||||||| ||||||||||||||
Sbjct: 93 ggtcttttaacaaacccgaaccggtccagccac 61
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 33 ccgggtcgacccgccaggccgggccgggtttaataa 68
||||||||||| ||| ||||| |||||||||||||
Sbjct: 45 ccgggtcgacctgccgggccgatccgggtttaataa 10
>54211_ptc-miRf12389-akr:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 ggaccggtccagccaccgggt 38
|||||||||||||||||||||
Sbjct: 68 ggaccggtccagccaccgggt 88
>54004_ptc-miRf12182-akr:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 aaacccggaccggtccagccaccgggtcg 40
||||||| |||||||||||| ||||||||
Sbjct: 72 aaacccgaaccggtccagcccccgggtcg 100
>51849_ptc-miRf10027-akr:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 3 tcttttattaaacccggaccggtccagccaccg 35
||||||| ||||| || ||||||||||||||||
Sbjct: 63 tcttttaataaactcgaaccggtccagccaccg 31
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccaggccgggccgggttt 63
||||||||||||||| |||||| |||||||
Sbjct: 106 ccgggtcgacccgccgggccggttcgggttt 136
>52818_ptc-miRf10996-akr:pmrd
Length = 78
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccac 33
|||||||||||| |||| |||||||||
Sbjct: 78 ttattaaacccgaaccgatccagccac 52
>52817_ptc-miRf10995-akr:pmrd
Length = 78
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccac 33
|||||||||||| |||| |||||||||
Sbjct: 78 ttattaaacccgaaccgatccagccac 52
>52317_ptc-miRf10495-akr:pmrd
Length = 125
Score = 38.2 bits (19), Expect = 8e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 13 aacccggaccggtccagccaccgggtcgacc 43
|||| ||| ||||||||||||||||| ||||
Sbjct: 78 aaccaggaacggtccagccaccgggttgacc 108
