miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53920_ptc-miRf12098-akr:pmrd
Length = 132
Score = 254 bits (128), Expect = 1e-68
Identities = 131/132 (99%)
Strand = Plus / Plus
Query: 1 aacatagttttcatgtgtggcaagaattcataaatgtttcagaatccttttcttacaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacatagttttcatgtgtggcaagaattcataaatgtttcagaatccttttcttacaagg 60
Query: 61 attccttattcatcctagctacaaaggattctgaaacatttatgaattcttgccacacat 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attccttattcatcctagctataaaggattctgaaacatttatgaattcttgccacacat 120
Query: 121 gaaaagtatgtt 132
||||||||||||
Sbjct: 121 gaaaagtatgtt 132
Score = 97.6 bits (49), Expect = 2e-21
Identities = 114/133 (85%), Gaps = 2/133 (1%)
Strand = Plus / Minus
Query: 1 aacatagttttcatgtgtggcaagaattcataaatgtttcagaatccttttcttacaagg 60
|||||| ||||||||||||||||||||||||||||||||||||||||||| | | |||
Sbjct: 132 aacatacttttcatgtgtggcaagaattcataaatgtttcagaatccttta-tagctagg 74
Query: 61 attccttattcatcctagctacaaa-ggattctgaaacatttatgaattcttgccacaca 119
|| | | ||||| | | ||| ||||||||||||||||||||||||||||||||||
Sbjct: 73 atgaataaggaatccttgtaagaaaaggattctgaaacatttatgaattcttgccacaca 14
Query: 120 tgaaaagtatgtt 132
|||||| ||||||
Sbjct: 13 tgaaaactatgtt 1
