miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 135 bits (68), Expect = 6e-33
Identities = 91/96 (94%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 1 agccggtcttt-attaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcg 58
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 agccggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcg 60
Query: 59 acccgccggcctgggccgggtttaataactgtggtt 94
||||||||| | || |||||||||||||||||||||
Sbjct: 61 acccgccgggccggaccgggtttaataactgtggtt 96
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 129 bits (65), Expect = 4e-31
Identities = 78/81 (96%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccgg 67
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgg 68
Query: 68 cctgggccgggtttaataact 88
| ||||||||||||||||||
Sbjct: 69 gccgggccgggtttaataact 89
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 127 bits (64), Expect = 2e-30
Identities = 80/84 (95%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccgg 67
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgg 65
Query: 68 cctgggccgggtttaataactgtg 91
| |||||||||||||||| ||||
Sbjct: 66 gccgggccgggtttaataattgtg 89
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 125 bits (63), Expect = 6e-30
Identities = 73/75 (97%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 13 ttaaacccggaccggtccagccaccgggtcgaccg-gtcccgggtcgacccgccggcctg 71
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgagtcccgggtcgacccgccgggctg 63
Query: 72 ggccgggtttaataa 86
|||||||||||||||
Sbjct: 64 ggccgggtttaataa 78
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccggc 68
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 69 ctgggccgggtttaataa 86
| ||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccggc 68
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 69 ctgggccgggtttaataa 86
| ||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccggc 68
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 69 ctgggccgggtttaataa 86
| ||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 123 bits (62), Expect = 2e-29
Identities = 75/78 (96%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccggc 68
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccggg 60
Query: 69 ctgggccgggtttaataa 86
| ||||||||||||||||
Sbjct: 61 ccgggccgggtttaataa 78
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 119 bits (60), Expect = 4e-28
Identities = 73/76 (96%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 13 ttaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccggcctg 71
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |
Sbjct: 10 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggccg 69
Query: 72 ggccgggtttaataac 87
||||||||||||||||
Sbjct: 70 ggccgggtttaataac 85
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 113 bits (57), Expect = 2e-26
Identities = 76/81 (93%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcga-ccggtcccgggtcgacccgccgg 67
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgatcgggtcccgggtcgacccgccgg 68
Query: 68 cctgggccgggtttaataact 88
| ||| ||||||||||||||
Sbjct: 69 gccgggtcgggtttaataact 89
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 109 bits (55), Expect = 4e-25
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 13 ttaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccggcctg 71
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | |
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggttgacccgccgggccg 63
Query: 72 ggccgggtttaataa 86
|||||||||||||||
Sbjct: 64 ggccgggtttaataa 78
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 107 bits (54), Expect = 1e-24
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgggtcgac-cggtcccgggtcgacccgccggc 68
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccgggtcgacccgccggg 60
Query: 69 ctgggccgggtttaataa 86
| |||||| |||||||||
Sbjct: 61 ccgggccgagtttaataa 78
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 103 bits (52), Expect = 2e-23
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 13 ttaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccggcctg 71
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 10 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggcca 69
Query: 72 ggccgggtttaataac 87
| ||||||||||||||
Sbjct: 70 gaccgggtttaataac 85
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 103 bits (52), Expect = 2e-23
Identities = 71/76 (93%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 14 taaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccggcctgg 72
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||
Sbjct: 11 taaacccggaccggtccagccaccgggtcgaccgggtcccgggtcgacccgccgggccgg 70
Query: 73 gccgggtttaataact 88
|||||||||| ||||
Sbjct: 71 tccgggtttaaaaact 86
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 99.6 bits (50), Expect = 3e-22
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgggtcga-ccggtcccgggtcgacccgccggc 68
||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccactgggtcgatcgggtcccgggtcgacccgccggg 60
Query: 69 ctgggccgggtttaataa 86
| || |||||||||||||
Sbjct: 61 ccggaccgggtttaataa 78
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 95.6 bits (48), Expect = 5e-21
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgaccgg-tcccgggtcgacccgccgg 67
|||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgaccggatcccaggtctacccgccgg 68
Query: 68 cctgggccgggtttaataac 87
| || || |||||||||||
Sbjct: 69 gccggaccaggtttaataac 88
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 95.6 bits (48), Expect = 5e-21
Identities = 74/80 (92%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgaccgg-tcccgggtcgacccgccgg 67
|||||||||||||||||| |||||| |||||||||| ||| |||||||||||||||||||
Sbjct: 7 tttattaaacccggaccg-tccagcgaccgggtcgatcgggtcccgggtcgacccgccgg 65
Query: 68 cctgggccgggtttaataac 87
| |||||||||||||||||
Sbjct: 66 gccgggccgggtttaataac 85
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 95.6 bits (48), Expect = 5e-21
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccgg 67
||||||||||||||||||||||||||||||| |||||| ||||| || |||||| |||||
Sbjct: 3 tttattaaacccggaccggtccagccaccggatcgaccgggtcctggatcgacctgccgg 62
Query: 68 cctgggccgggtttaataac 87
| |||||||||||||||||
Sbjct: 63 gccgggccgggtttaataac 82
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 93.7 bits (47), Expect = 2e-20
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccgg 67
|||| |||||||||||||||||||||||||| |||||| |||||||||||||||||| ||
Sbjct: 6 tttagtaaacccggaccggtccagccaccggatcgaccaggtcccgggtcgacccgctgg 65
Query: 68 cctgggccgggtttaataa 86
||||||||||||||||
Sbjct: 66 gtcgggccgggtttaataa 84
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 93.7 bits (47), Expect = 2e-20
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccgg 67
|||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||
Sbjct: 9 tttattaaacccggaccggtccagccactgggtcgaccgggtcccgggtcgactcgccgg 68
Query: 68 cctgggccgggtttaataa 86
| |||||||| ||||||
Sbjct: 69 gccaggccgggtgtaataa 87
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 87.7 bits (44), Expect = 1e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccgg 67
||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| || |
Sbjct: 82 tttattaaacccggaccggtccagccaccgggttgaccgggtcccgattcgacccaccag 23
Query: 68 cctgggccgggtttaataac 87
| |||||||||||||||||
Sbjct: 22 gccgggccgggtttaataac 3
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 81.8 bits (41), Expect = 8e-17
Identities = 48/49 (97%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 1 agccggtcttt-attaaacccggaccggtccagccaccgggtcgaccgg 48
||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 89 agccggtcttttattaaacccggaccggtccagccaccgggtcgaccgg 41
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 79.8 bits (40), Expect = 3e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgaccgg 48
||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggtcgaccgg 45
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 79.8 bits (40), Expect = 3e-16
Identities = 40/40 (100%)
Strand = Plus / Minus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgaccgg 48
||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 tttattaaacccggaccggtccagccaccgggtcgaccgg 34
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/80 (86%), Gaps = 8/80 (10%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgaccggtcccgggtcgacccgccggc 68
||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 3 tttattaaacccgaaccggtccagccaccgggtc--------ccgggtcgacccgccggg 54
Query: 69 ctgggccgggtttaataact 88
| ||||||||||||||||||
Sbjct: 55 ccgggccgggtttaataact 74
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 77.8 bits (39), Expect = 1e-15
Identities = 46/47 (97%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 1 agccggtcttt-attaaacccggaccggtccagccaccgggtcgacc 46
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 79 agccggtcttttattaaacccggaccggtccagccaccgggtcgacc 33
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataac 87
||||||||||| || || | |||||||||||||||||
Sbjct: 43 ccgggtcgacctgctgggccgggccgggtttaataac 7
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataac 87
||||||||||||||||| | |||||| ||||||||||
Sbjct: 36 ccgggtcgacccgccgggccgggccgagtttaataac 72
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tttattaaacccggaccggtccagccaccgggtcgacc 44
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataac 87
||||||||||||||||| | |||||| ||||||||||
Sbjct: 34 ccgggtcgacccgccggaccgggccgagtttaataac 70
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggtcgacc 43
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataac 87
||||||||||||||| | | |||||||||||||||||
Sbjct: 33 ccgggtcgacccgccaggccgggccgggtttaataac 69
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggtcgacc 43
Score = 61.9 bits (31), Expect = 7e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataactgtggt 93
||||||||||||||||| | |||||||||||||||||| ||||
Sbjct: 33 ccgggtcgacccgccgggccgggccgggtttaataactatggt 75
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgac 45
|||||||||||||||||||||||||||||||||||||
Sbjct: 66 tttattaaacccggaccggtccagccaccgggtcgac 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataa 86
|||||||||| ||||| | ||||||||||||||||
Sbjct: 39 ccgggtcgacttgccgggccgggccgggtttaataa 4
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgggtcgacc 46
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataa 86
||||||||||||||||| | ||||||||||||||||
Sbjct: 27 ccgggtcgacccgccgggccgggccgggtttaataa 62
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgggtcgacc 46
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataa 86
||||||||||||||||| | ||||||||||||||||
Sbjct: 27 ccgggtcgacccgccgggccgggccgggtttaataa 62
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 73.8 bits (37), Expect = 2e-14
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 36 ccgggtcgaccgg-tcccgggtcgacccgccggcctgggccgggtttaataac 87
||||||||||||| ||||||||||||||||||| | |||||||||||||||||
Sbjct: 55 ccgggtcgaccgggtcccgggtcgacccgccgggccgggccgggtttaataac 3
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtc 42
||||||||||||||||||||||||||||||||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggtc 39
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 13 ttaaacccggaccggtccagccaccgggtcgacc 46
||||||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacc 37
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataa 86
||||||||||||||||| | ||||||||||||||||
Sbjct: 27 ccgggtcgacccgccgggccgggccgggtttaataa 62
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
||||||||||||||||||||||| ||||||||||||||
Sbjct: 66 tttattaaacccggaccggtccaaccaccgggtcgacc 29
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataac 87
||||||||||| ||||| | |||||||||||||||||
Sbjct: 39 ccgggtcgacctgccgggccgggccgggtttaataac 3
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtc 42
||||||||||||||||||||||||||||||||||
Sbjct: 6 tttattaaacccggaccggtccagccaccgggtc 39
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 1e-12
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 10 ttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccg 66
|||||||||||||||||||||||| |||||||||||| ||| || ||| |||||||||
Sbjct: 78 ttattaaacccggaccggtccagctaccgggtcgaccaggttccaggttgacccgccg 21
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgggtc 42
|||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtc 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataa 86
||||||| ||| ||||| | ||||||||||||||||
Sbjct: 27 ccgggtcaacctgccgggccgggccgggtttaataa 62
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 63.9 bits (32), Expect = 2e-11
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 1 agccggtcttt-attaaacccggaccggtccagccaccgggtcga-ccggtcccgggtcg 58
||||||||||| | ||||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 64 agccggtcttttaataaacccagaccggtccagccaccgggtcgatcgggtcccgggtcg 123
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 9 tttattaaacccggaccggtccagccaccgg 39
|||||||||||||||||||||||||||||||
Sbjct: 70 tttattaaacccggaccggtccagccaccgg 40
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtc 42
||||||||||||||||||||| ||||||||||||
Sbjct: 3 tttattaaacccggaccggtctagccaccgggtc 36
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgg 39
||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgg 30
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 52 cgggtcgacccgccggcctgggccgggtttaataa 86
|||||||||||||||| | ||||||||||||||||
Sbjct: 32 cgggtcgacccgccgggccgggccgggtttaataa 66
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtc 42
|||| |||||||||||||||||||||||||||||
Sbjct: 6 tttagtaaacccggaccggtccagccaccgggtc 39
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
||||||||||||||||||||| ||||||||| ||||||
Sbjct: 3 tttattaaacccggaccggtctagccaccggatcgacc 40
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 51 ccgggtcgacccgccggcctgggccgggtttaataac 87
|||| |||||||||||| | |||||||||||||||||
Sbjct: 30 ccggatcgacccgccgggccgggccgggtttaataac 66
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
|||||||||||| |||||||||||||||||||| ||||
Sbjct: 66 tttattaaacccagaccggtccagccaccgggttgacc 103
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 9 tttattaaacccggaccggtccagccaccgggtc 42
||||||||||||||||||||||||||||| ||||
Sbjct: 76 tttattaaacccggaccggtccagccaccaggtc 43
>53131_ptc-miRf11309-akr:pmrd
Length = 56
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 10 ttattaaacccggaccggtccagccaccgggtc 42
|||||||||||||||||||||||||||| ||||
Sbjct: 1 ttattaaacccggaccggtccagccacccggtc 33
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 58.0 bits (29), Expect = 1e-09
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 15 aaacccggaccggtccagccaccgggtcgaccgg-tcccgggtcgacccgccggcctggg 73
||||||| |||||||||| |||||||| |||| ||||| ||||||||||||| | ||
Sbjct: 73 aaacccgaaccggtccaggtcccgggtcggccgggtcccgagtcgacccgccgggccggt 14
Query: 74 ccgggtttaataa 86
|||||||||||||
Sbjct: 13 ccgggtttaataa 1
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgaccgg 48
||||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 3 tttattaaacccggaccggtctagctaccggatcgaccgg 42
>52059_ptc-miRf10237-akr:pmrd
Length = 97
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 15 aaacccggaccggtccagccaccgggtcgacc 46
|||||||||| |||||||||||||||||||||
Sbjct: 42 aaacccggactggtccagccaccgggtcgacc 11
>51920_ptc-miRf10098-akr:pmrd
Length = 84
Score = 56.0 bits (28), Expect = 5e-09
Identities = 53/60 (88%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 9 tttattaaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccgg 67
|||| ||||||||||||||||| || || ||||||||| ||||||| |||||||| ||||
Sbjct: 80 tttagtaaacccggaccggtccggctactgggtcgaccgggtcccgagtcgacccaccgg 21
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 15 aaacccggaccggtccagccaccgggtcgaccgg 48
|||| |||||||||||||||| ||||||||||||
Sbjct: 11 aaactcggaccggtccagccatcgggtcgaccgg 44
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 50.1 bits (25), Expect = 3e-07
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 36 ccgggtcgaccgg-tcccgggtcgacccgccgg 67
||||||||||||| |||||||||||||||||||
Sbjct: 90 ccgggtcgaccgggtcccgggtcgacccgccgg 122
>52317_ptc-miRf10495-akr:pmrd
Length = 125
Score = 46.1 bits (23), Expect = 4e-06
Identities = 42/47 (89%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 16 aacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacc 61
|||| ||| ||||||||||||||||| |||| ||||||| |||||||
Sbjct: 78 aaccaggaacggtccagccaccgggttgaccgggtcccgagtcgacc 124
>54004_ptc-miRf12182-akr:pmrd
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 aaacccggaccggtccagccaccgggtcgaccgg 48
||||||| |||||||||||| |||||||| ||||
Sbjct: 72 aaacccgaaccggtccagcccccgggtcggccgg 105
>52391_ptc-miRf10569-akr:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 17 acccggaccggtccagccaccg 38
||||||||||||||||||||||
Sbjct: 38 acccggaccggtccagccaccg 17
>52233_ptc-miRf10411-akr:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 19 ccggaccggtccagccaccgggtcga 44
||||||||||||||||||| ||||||
Sbjct: 46 ccggaccggtccagccaccaggtcga 21
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 61/73 (83%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 15 aaacccggaccggtccagccaccgggtcgacc-ggtcccgggtcgacccgccggcctggg 73
||||||| |||||||||||||| || ||| ||||||||||||||| ||||| | |
Sbjct: 82 aaacccgaaccggtccagccactaggataaccgggtcccgggtcgacctgccgggccgat 23
Query: 74 ccgggtttaataa 86
|||||||||||||
Sbjct: 22 ccgggtttaataa 10
>54211_ptc-miRf12389-akr:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ggaccggtccagccaccgggt 41
|||||||||||||||||||||
Sbjct: 68 ggaccggtccagccaccgggt 88
>52543_ptc-miRf10721-akr:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 23 accggtccagccaccgggtcgacc 46
||||||||| ||||||||||||||
Sbjct: 38 accggtccaaccaccgggtcgacc 15
>52252_ptc-miRf10430-akr:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 28 tccagccaccgggtcgaccg-gtcccgggtcgaccc 62
|||||| ||||||| ||||| |||||||||||||||
Sbjct: 78 tccagctaccgggttgaccgagtcccgggtcgaccc 113
