miRNEST 2.0, an integrative microRNA resource :: BLAST
>42454_sof-MIR159c:mirbase
Length = 238
Score = 250 bits (126), Expect = 3e-67
Identities = 165/178 (92%)
Strand = Plus / Plus
Query: 8 atcgaagagctcccttcgatccaatccaggagggggagtggtcggatgcagctgccggtt 67
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 40 atcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggtt 99
Query: 68 catggatacctatctggtgcagaaatgttccatgttcacctgcacttgcatgggtgtgca 127
||||||| ||| |||||||||| |||| ||| |||||||||||||||||||||||||
Sbjct: 100 catggatgcctctctggtgcagcaatgactaatgctcacctgcacttgcatgggtgtgca 159
Query: 128 tgacccgggagatgaacccaccagcatcttcccctcgtgtttggattgaagggagctc 185
||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||
Sbjct: 160 tgacccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 217
>42495_sbi-MIR159b:mirbase
Length = 253
Score = 242 bits (122), Expect = 8e-65
Identities = 161/174 (92%)
Strand = Plus / Plus
Query: 12 aagagctcccttcgatccaatccaggagggggagtggtcggatgcagctgccggttcatg 71
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 59 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 118
Query: 72 gatacctatctggtgcagaaatgttccatgttcacctgcacttgcatgggtgtgcatgac 131
||| ||| |||||||||| |||| ||| |||||||||||||||||||||||||||||
Sbjct: 119 gatgcctctctggtgcagcaatgactgatgctcacctgcacttgcatgggtgtgcatgac 178
Query: 132 ccgggagatgaacccaccagcatcttcccctcgtgtttggattgaagggagctc 185
||||||||||||||||||| |||||| |||||||| ||||||||||||||||||
Sbjct: 179 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 232
>42693_zma-MIR159d:mirbase
Length = 217
Score = 224 bits (113), Expect = 2e-59
Identities = 164/180 (91%), Gaps = 2/180 (1%)
Strand = Plus / Plus
Query: 8 atcgaagagctcccttcgatccaatccaggagggggagtggtcggatgcagctgccggtt 67
|||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 17 atcgaagagctcccttcgatccaatccaggagggaaagtggtcggctgcagctgccggtt 76
Query: 68 catggatacctatctggtgcagaaatgttc--catgttcacctgcacttgcatgggtgtg 125
||||||||||| |||||||||| |||| | ||| |||||||||||||||||||||||
Sbjct: 77 catggatacctctctggtgcagcaatggccgagatgctcacctgcacttgcatgggtgtg 136
Query: 126 catgacccgggagatgaacccaccagcatcttcccctcgtgtttggattgaagggagctc 185
|||||||||||||| ||||| |||| |||||| |||||||| ||||||||||||||||||
Sbjct: 137 catgacccgggagacgaaccgaccatcatctttccctcgtgcttggattgaagggagctc 196
>42692_zma-MIR159c:mirbase
Length = 217
Score = 224 bits (113), Expect = 2e-59
Identities = 164/180 (91%), Gaps = 2/180 (1%)
Strand = Plus / Plus
Query: 8 atcgaagagctcccttcgatccaatccaggagggggagtggtcggatgcagctgccggtt 67
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 17 atcgaagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggtt 76
Query: 68 catggatacctatctggtgcagaaatgttccatgttcac--ctgcacttgcatgggtgtg 125
||||||||||| |||||||||| |||| | || |||| |||||||||||||||||||
Sbjct: 77 catggatacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtg 136
Query: 126 catgacccgggagatgaacccaccagcatcttcccctcgtgtttggattgaagggagctc 185
||||||||||||||||| ||| ||| |||||| |||||||| ||||||||||||||||||
Sbjct: 137 catgacccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctc 196
>41730_bdi-MIR159:mirbase
Length = 234
Score = 151 bits (76), Expect = 2e-37
Identities = 152/176 (86%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 11 gaagagctcccttcgatccaatccaggagggggagtggtcggatgcagctgccggttcat 70
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 27 gaagagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcat 86
Query: 71 ggatacctatctggtgca-gaaatgttccatgttcacctgcacttgcatgggtgtgcatg 129
|||||||| ||||||||| | | ||| | | |||| ||||| ||| ||||||
Sbjct: 87 ggatacctgtctggtgcatgcagtgtggtaatagcctgcgcacctgcatcggtttgcatg 146
Query: 130 acccgggagatgaacccaccagcatcttcccctcgtgtttggattgaagggagctc 185
|||||||||||||||| ||||| |||| |||||||| ||||||||||||||||||
Sbjct: 147 acccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggagctc 202
>41922_osa-MIR159f:mirbase
Length = 188
Score = 115 bits (58), Expect = 1e-26
Identities = 144/172 (83%), Gaps = 8/172 (4%)
Strand = Plus / Plus
Query: 14 gagctcccttcgatccaatccaggagggggagtggtcggatgcagctgccggttcatgga 73
|||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||
Sbjct: 13 gagctcccttcgatccaatccaggagaggaagtggtaggatgcagctgccggttcatgga 72
Query: 74 tacctatctggtgcagaaatgttccatgttcacctgcacttgcatgggtgtgcatgaccc 133
||||| | |||| |||| || | ||||||||||||||| ||||||||||
Sbjct: 73 tacctctgcagtgc----atgt----cgtaggcttgcacttgcatgggtttgcatgaccc 124
Query: 134 gggagatgaacccaccagcatcttcccctcgtgtttggattgaagggagctc 185
||||||||||||||||| |||||| || || ||||||||||||||||||
Sbjct: 125 gggagatgaacccaccattgtcttcctcttatgcttggattgaagggagctc 176
>41919_osa-MIR159c:mirbase
Length = 197
Score = 95.6 bits (48), Expect = 1e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 106 cctgcacttgcatgggtgtgcatgacccgggagatgaacccaccagcatcttcccctcgt 165
||||||||||||||||| ||||||||||||||||||||||||||| |||||| || |
Sbjct: 106 cctgcacttgcatgggtttgcatgacccgggagatgaacccaccattgtcttcctctatt 165
Query: 166 gtttggattgaagggagctc 185
| ||||||||||||||||||
Sbjct: 166 gattggattgaagggagctc 185
>41921_osa-MIR159e:mirbase
Length = 191
Score = 89.7 bits (45), Expect = 7e-19
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 11 gaagagctccctt-cgatccaatccaggagggggagtggtcggatgcagctgccggttca 69
||||||||||||| ||||||||| |||||| || |||||| |||||||||||||||||||
Sbjct: 10 gaagagctccctttcgatccaattcaggagaggaagtggtaggatgcagctgccggttca 69
Query: 70 tggatacct 78
|||||||||
Sbjct: 70 tggatacct 78
>41920_osa-MIR159d:mirbase
Length = 189
Score = 89.7 bits (45), Expect = 7e-19
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 14 gagctcccttcgatccaatccaggagggggagtggtcggatgcagctgccggttcatgga 73
||||||| ||||||||||| |||||| || |||||| |||||||||||||||||||||||
Sbjct: 13 gagctcctttcgatccaattcaggagaggaagtggtgggatgcagctgccggttcatgga 72
Query: 74 tacct 78
|||||
Sbjct: 73 tacct 77
>42700_zma-MIR159k:mirbase
Length = 200
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 165 tgtttggattgaagggagctc 185
|||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctc 197
>42699_zma-MIR159j:mirbase
Length = 252
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 165 tgtttggattgaagggagctc 185
|||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctc 249
>42691_zma-MIR159b:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 165 tgtttggattgaagggagctc 185
|||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctc 200
>42634_tae-MIR159a:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 165 tgtttggattgaagggagctc 185
|||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctc 172
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 165 tgtttggattgaagggagctc 185
|||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctc 29
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 165 tgtttggattgaagggagctc 185
|||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctc 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 165 tgtttggattgaagggagctc 185
|||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctc 178
>40338_rco-MIR159:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 165 tgtttggattgaagggagctc 185
|||||||||||||||||||||
Sbjct: 153 tgtttggattgaagggagctc 173
>40018_ath-MIR159c:mirbase
Length = 225
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 166 gtttggattgaagggagctc 185
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
>39806_aly-MIR159c:mirbase
Length = 220
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 166 gtttggattgaagggagctc 185
||||||||||||||||||||
Sbjct: 196 gtttggattgaagggagctc 215
