miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>31757_mmu-let-7d:mirbase
          Length = 103

 Score =  168 bits (85), Expect = 6e-43
 Identities = 97/101 (96%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgggttcctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaag 70
           |||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 3   tgggttcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 62

                                                    
Query: 71  gaggtaactatacgacctgctgcctttcttagggccttatt 111
           ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 63  gagttaactatacgacctgctgcctttcttagggccttatt 103




>33113_bta-let-7d:mirbase
          Length = 87

 Score =  165 bits (83), Expect = 9e-42
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 76
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cctaggaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 60

                                      
Query: 77  actatacgacctgctgcctttcttagg 103
           |||||||||||||||||||||||||||
Sbjct: 61  actatacgacctgctgcctttcttagg 87




>27634_mml-let-7d:mirbase
          Length = 87

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 76
           |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1   cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                      
Query: 77  actatacgacctgctgcctttcttagg 103
           |||||||||||||||||||||||||||
Sbjct: 61  actatacgacctgctgcctttcttagg 87




>28344_hsa-let-7d:mirbase
          Length = 87

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 76
           |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1   cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                      
Query: 77  actatacgacctgctgcctttcttagg 103
           |||||||||||||||||||||||||||
Sbjct: 61  actatacgacctgctgcctttcttagg 87




>30736_ppy-let-7d:mirbase
          Length = 87

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 76
           |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1   cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggta 60

                                      
Query: 77  actatacgacctgctgcctttcttagg 103
           |||||||||||||||||||||||||||
Sbjct: 61  actatacgacctgctgcctttcttagg 87




>30131_ptr-let-7d:mirbase
          Length = 86

 Score =  155 bits (78), Expect = 9e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                       
Query: 22  gaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggtaactat 81
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5   gaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggaggtaactat 64

                                 
Query: 82  acgacctgctgcctttcttagg 103
           ||||||||||||||||||||||
Sbjct: 65  acgacctgctgcctttcttagg 86




>32643_rno-let-7d:mirbase
          Length = 98

 Score =  155 bits (78), Expect = 9e-39
 Identities = 93/98 (94%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgggttcctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaag 70
           |||| ||||| |||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 1   tgggctcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaag 60

                                                 
Query: 71  gaggtaactatacgacctgctgcctttcttagggcctt 108
           ||| ||||||||||||||||||||||||||||||||||
Sbjct: 61  gagttaactatacgacctgctgcctttcttagggcctt 98




>26932_eca-let-7d:mirbase
          Length = 87

 Score =  149 bits (75), Expect = 5e-37
 Identities = 84/87 (96%)
 Strand = Plus / Plus

                                                                       
Query: 17  cctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggta 76
           |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 1   cctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaaggagata 60

                                      
Query: 77  actatacgacctgctgcctttcttagg 103
           |||||||||||||||||||||||||||
Sbjct: 61  actatacgacctgctgcctttcttagg 87




>27322_mdo-let-7d:mirbase
          Length = 106

 Score =  149 bits (75), Expect = 5e-37
 Identities = 90/95 (94%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgggttcctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaag 70
           |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3   tgggctcctaggaagaggtagtaggttgcatagttttagggcagggattttgcccacaag 62

                                              
Query: 71  gaggtaactatacgacctgctgcctttcttagggc 105
           ||| ||||||||| |||||||||||||||||||||
Sbjct: 63  gagttaactatacaacctgctgcctttcttagggc 97




>33099_rno-mir-3596b:mirbase
          Length = 95

 Score =  149 bits (75), Expect = 5e-37
 Identities = 87/91 (95%)
 Strand = Plus / Minus

                                                                       
Query: 16  tcctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggt 75
           ||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||| |
Sbjct: 91  tcctaggaagaggtagtaggttgcatagttttagggcagagattttgcccacaaggagtt 32

                                          
Query: 76  aactatacgacctgctgcctttcttagggcc 106
           |||||||||||||||||||||||||||||||
Sbjct: 31  aactatacgacctgctgcctttcttagggcc 1




>25873_gga-let-7d:mirbase
          Length = 103

 Score =  145 bits (73), Expect = 8e-36
 Identities = 94/101 (93%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgggttcctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaag 70
           |||| ||||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||
Sbjct: 3   tgggctcctaggaagaggtagtgggttgcatagttttagggcagggattttgctcacaag 62

                                                    
Query: 71  gaggtaactatacgacctgctgcctttcttagggccttatt 111
           ||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 63  gaggtaactatacaacctgctgcctttcttagggctttatt 103




>26382_tgu-let-7d:mirbase
          Length = 92

 Score =  139 bits (70), Expect = 5e-34
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                       
Query: 16  tcctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaaggaggt 75
           ||||| |||||||||||||||||||||||||| ||||||||||||||| || ||||||||
Sbjct: 3   tcctaggaagaggtagtaggttgcatagttttagggcagggattttgctcagaaggaggt 62

                                         
Query: 76  aactatacgacctgctgcctttcttagggc 105
           |||||||| |||||||||||||||||||||
Sbjct: 63  aactatacaacctgctgcctttcttagggc 92




>31411_oan-let-7d:mirbase
          Length = 116

 Score =  125 bits (63), Expect = 8e-30
 Identities = 93/103 (90%)
 Strand = Plus / Plus

                                                                       
Query: 11  tgggttcctaagaagaggtagtaggttgcatagttttcgggcagggattttgcccacaag 70
           |||| ||||| |||||||||||||||||||||||||| |||||| |||||||| || |||
Sbjct: 11  tgggctcctaggaagaggtagtaggttgcatagttttagggcagtgattttgctcataag 70

                                                      
Query: 71  gaggtaactatacgacctgctgcctttcttagggccttattat 113
           | | ||||||||| ||||||||||||||||||||| |||||||
Sbjct: 71  gtgttaactatacaacctgctgcctttcttagggctttattat 113




>26375_tgu-let-7a-1:mirbase
          Length = 92

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 25 gaggtagtaggttgcatagttttcgggc 52
          |||||||||||||| |||||||| ||||
Sbjct: 12 gaggtagtaggttgtatagttttagggc 39