miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01045;mir-544;ABRT011071275.1/960-857 9478:Tarsius syrichta
(Philippine tarsier)
Length = 104
Score = 56.0 bits (28), Expect = 8e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 19 ggatctggttaaaatgcagattccaattcagt 50
|||||| |||||||||||||||||||||||||
Sbjct: 16 ggatcttgttaaaatgcagattccaattcagt 47
>RF01045;mir-544;AACN010587888.1/70-173 9615:Canis lupus
familiaris (dog)
Length = 104
Score = 54.0 bits (27), Expect = 3e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 19 ggatctggttaaaatgcagattccaattcag 49
|||||| ||||||||||||||||||||||||
Sbjct: 16 ggatcttgttaaaatgcagattccaattcag 46
>RF01045;mir-544;AAWR02007517.1/2188-2291 9796:Equus caballus
(horse)
Length = 104
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ggatctggttaaaatgcagattc 41
|||||||||||||||||||||||
Sbjct: 16 ggatctggttaaaatgcagattc 38
>RF01045;mir-544;AAWR02036011.1/38956-39060 9796:Equus caballus
(horse)
Length = 105
Score = 46.1 bits (23), Expect = 8e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 19 ggatctggttaaaatgcagattccaattcag 49
|||||| ||||||||||||||||| ||||||
Sbjct: 16 ggatcttgttaaaatgcagattccgattcag 46
>RF01045;mir-544;AAWR02007784.1/3737-3634 9796:Equus caballus
(horse)
Length = 104
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ggatctggttaaaatgcagattc 41
|||||||||||||||||||||||
Sbjct: 15 ggatctggttaaaatgcagattc 37
>RF01045;mir-544;ABRN01358284.1/13567-13469 9739:Tursiops
truncatus (bottlenosed dolphin)
Length = 99
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ggatctggttaaaatgcagattc 41
|||||||||||||||||||||||
Sbjct: 16 ggatctggttaaaatgcagattc 38
>RF01045;mir-544;AAGU02059221.1/5119-5222 9785:Loxodonta africana
(African savanna elephant)
Length = 104
Score = 46.1 bits (23), Expect = 8e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ggatctggttaaaatgcagattc 41
|||||||||||||||||||||||
Sbjct: 16 ggatctggttaaaatgcagattc 38
>RF01045;mir-544;AAGV020263249.1/25-127 9361:Dasypus novemcinctus
(nine-banded armadillo)
Length = 103
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 gattctgcatttctaacaaggt 73
||||||||||||||||||||||
Sbjct: 66 gattctgcatttctaacaaggt 87
>RF01045;mir-544;AAWR02016509.1/76683-76580 9796:Equus caballus
(horse)
Length = 104
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 gattctgcatttctaacaaggt 73
||||||||||||||||||||||
Sbjct: 67 gattctgcatttctaacaaggt 88
>RF01045;mir-544;ABRN01314933.1/3264-3364 9739:Tursiops truncatus
(bottlenosed dolphin)
Length = 101
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 21 atctggttaaaatgcagattccaattcagt 50
|||| ||||||||||||||||| |||||||
Sbjct: 18 atcttgttaaaatgcagattccgattcagt 47
>RF01045;mir-544;CABD01313218.2/494-593 9595:Gorilla gorilla
gorilla (Western lowland gorilla)
Length = 100
Score = 44.1 bits (22), Expect = 3e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 19 ggatctggttaaaatgcagattccaattca 48
|||||| |||||||||||||||| ||||||
Sbjct: 16 ggatcttgttaaaatgcagattctaattca 45
