miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54281_ptc-miRf12459-akr:pmrd
Length = 147
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 115 atttctgagttggtagcgactcagttttc 143
|||||||||||||||||||||||||||||
Sbjct: 54 atttctgagttggtagcgactcagttttc 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 7 atttctgagtcgatagcgactcagttttc 35
|||||||||| | ||||||||||||||||
Sbjct: 54 atttctgagttggtagcgactcagttttc 82
>54284_ptc-miRf12462-akr:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 atttctgagttggtagcgactcagttttc 143
|||||||||| || |||||||||||||||
Sbjct: 54 atttctgagtgggcagcgactcagttttc 82
>54280_ptc-miRf12458-akr:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 atttctgagttggtagcgactcagttttc 143
|||||||||| || |||||||||||||||
Sbjct: 54 atttctgagtgggcagcgactcagttttc 82
>52605_ptc-miRf10783-akr:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 115 atttctgagttggtagcgactcagttttc 143
|||||||||| || |||||||||||||||
Sbjct: 51 atttctgagtgggcagcgactcagttttc 79
>53531_ptc-miRf11709-akr:pmrd
Length = 147
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 116 tttctgagttggtagcgactcagttttc 143
||||||||| || |||||||||||||||
Sbjct: 55 tttctgagtgggcagcgactcagttttc 82
